Data
Access scientific datasets from the USGS National Wildlife Health Center below. Wildlife morbidity and mortality event data can be accessed through WHISPers. If you can't find the data you are looking for, contact whispers@usgs.gov.
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Viral loads, histology, and adverse events in transgenic mice after passive transfer of serum from black-footed ferrets (Mustela nigripes) used to assess the anti-viral efficacy of a subunit SARS-CoV-2 vaccine candidate Viral loads, histology, and adverse events in transgenic mice after passive transfer of serum from black-footed ferrets (Mustela nigripes) used to assess the anti-viral efficacy of a subunit SARS-CoV-2 vaccine candidate
This data set provides biological information from of a captive study of transgenic mice that received either passive serum transfers from black-footed ferrets (BFFs) that were vaccinated against SARS-CoV-2 or BFFs that were unvaccinated, or a monoclonal antibody against SARS-CoV-2 or lastly a placebo. After these treatments mice were challenged with SARS-CoV-2. The data included here...
Applying Simulated Treatments to Bat Populations Experiencing Severe White-nose Syndrome Mortality Applying Simulated Treatments to Bat Populations Experiencing Severe White-nose Syndrome Mortality
We developed a model allowing for the application of treatment strategies to bat populations at risk of severe mortality from WNS. The model allows the bat population to exist within a network of hibernacula and updates survival, reproduction, movement, treatment applications, and treatment related disturbance annually. For simplicity, the effects of WNS are experienced across all...
Data from the article “An opportunistic survey reveals an unexpected coronavirus diversity hotspot in North America” Data from the article “An opportunistic survey reveals an unexpected coronavirus diversity hotspot in North America”
In summer 2020, SARS-CoV-2 was detected on mink farms in Utah. An interagency One Health response was initiated to assess the extent of the outbreak and included sampling animals from or near affected mink farms and testing them for SARS-CoV-2 and non-SARS coronaviruses. Among the 365 animals sampled, including domestic cats, mink, rodents, raccoons, and skunks, 261 (72%) of the animals...
Histopathology of little brown bats (Myotis lucifugus) collected from a maternity roost in Leelanau County, Michigan, USA, in June 2014 Histopathology of little brown bats (Myotis lucifugus) collected from a maternity roost in Leelanau County, Michigan, USA, in June 2014
This work is part of a study investigating the movement of microcystin from aquatic to terrestrial ecosystems via trophic transfer. Little brown bats (Myotis lucifugus), feeding opportunistically on aquatic insects including Hexagenia mayflies, were collected from a maternity roost near Little Traverse Lake (Leelanau County, Michigan, USA). Bats and fecal samples were collected for...
Data set on reticuloendotheliosis in Hawaiian birds Data set on reticuloendotheliosis in Hawaiian birds
Only one virus, Avipox, has been documented in wild birds in Hawaii. Here, using immunohistochemistry and PCR, we found that two native threatened Hawaiian geese, one with multicentric histiocytoma and another with toxoplasmosis and one Laysan albatross with avian pox were infected with reticuloendotheliosis virus (REV). The virus was isolated from one of the geese by cell culture. PCR...
Serology, survival, and detection of rabies data from vaccination trials in the common vampire bat (Desmodus rotundus) using a recombinant raccoon poxvirus-vectored mosaic rabies vaccine candidate Serology, survival, and detection of rabies data from vaccination trials in the common vampire bat (Desmodus rotundus) using a recombinant raccoon poxvirus-vectored mosaic rabies vaccine candidate
This data set provides biological information from of a captive colony of common vampire bats (wild-caught and born in captivity) that were part of an experimental study on vaccination. It includes results obtained from different assays: RT-PCR, serum neutralization, Rabies direct-fluorescent antibody test, performed periodically during the study (Sep 2018 – May 2020).
Experimental infection of Mexican free-tailed bats (Tadarida brasiliensis) with SARS-CoV-2 Experimental infection of Mexican free-tailed bats (Tadarida brasiliensis) with SARS-CoV-2
We experimentally challenged wild Mexican free-tailed bats (TABR) with SARS-CoV-2 to determine the susceptibility, reservoir potential, and population impacts of infection in this species. Of nine bats oronasally inoculated with SARS-CoV-2, five became infected and orally excreted moderate amounts of virus for up to 18 days post inoculation. These five subjects all seroconverted and...
Histopathology of tri-colored bats (Perimyotis subflavus) exposed to the fungus Pseudogymnoascus destructans under varying temperature and humidity conditions Histopathology of tri-colored bats (Perimyotis subflavus) exposed to the fungus Pseudogymnoascus destructans under varying temperature and humidity conditions
This work is part of an experimental trial investigating the effects of microclimate conditions of temperature and humidity on a fungal pathogen, Pseudogymnoascus destructans (Pd), that causes white-nose syndrome (WNS) disease in hibernating bats. As part of the trial, tri-colored bats (Perimyotis subflavus) were exposed to Pseudogymnoascus destructans (Pd) and allowed to hibernate in...
Population genetic analysis of the snake-infecting fungus, Ophidiomyces ophidiicola, in the eastern United States Population genetic analysis of the snake-infecting fungus, Ophidiomyces ophidiicola, in the eastern United States
Snake fungal disease (SFD; ophidiomycosis), caused by the pathogen Ophidiomyces ophidiicola (Oo), has been documented in wild snakes in North America and Eurasia, and is a potentially emerging disease in the eastern USA. However, a lack of historical disease data has made it challenging to determine whether Oo is a recent arrival to the USA or whether SFD emergence is due to other...
Results of algal toxin testing from wildlife mortality submissions to the National Wildlife Health Center Results of algal toxin testing from wildlife mortality submissions to the National Wildlife Health Center
This data set is composed of all animals received as a diagnostic submission to the USGS National Wildlife Health Center for which algal toxin testing was performed from November 1998 to January 2018. Birds with a histologic diagnosis of avian vacuolar myelinopathy, a disease caused by the algal toxin aetokthonotoxin, are also included. Algal toxins tested for include brevetoxin
Dataset: Surveillance for Avian Influenza Virus in Iceland, 2010 - 2018 Dataset: Surveillance for Avian Influenza Virus in Iceland, 2010 - 2018
From 2010-2018 we investigated the occurrence of avian influenza virus in wild birds in Iceland. A total of 6635 swabs samples were collected from wild birds or fecal material directly associated with wild birds. We screened all samples by a real time - polymerase chain reaction (RT-PCR) test with 381 testing positive. Further testing of all RT-PCR positive samples and all negative...
A Novel Gonadotropic Microsporidian Parasite (Microsporidium clinchi n. sp.) Infecting a Declining Population of Pheasantshell Mussels (Actinonaias pectorosa) (Unioinidae) from the Clinch River, USA A Novel Gonadotropic Microsporidian Parasite (Microsporidium clinchi n. sp.) Infecting a Declining Population of Pheasantshell Mussels (Actinonaias pectorosa) (Unioinidae) from the Clinch River, USA
Freshwater mussels of the order Unionida are among the most endangered animal groups globally, but the causes of population declines are often enigmatic with little known about the role of disease. In 2018, we collected wild adult pheasantshell (Actinonaias pectorosa) and mucket (Actinonaias ligamentina) during an epidemiologic survey investigating an ongoing mussel mass mortality event...