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Publications

This is a list of publications written by Patuxent employees since Patuxent opened in 1939.  To search for Patuxent's publications by author or title, please click below to go to the USGS Publication Warehouse.

Filter Total Items: 8128

Measuring U.S. Federal Agency progress toward implementation of alternative methods in toxicity testing Measuring U.S. Federal Agency progress toward implementation of alternative methods in toxicity testing

The U.S. Government Accountability Office (GAO) recommended to Congress that federal agencies establish a workgroup through ICCVAM to propose metrics for assessing progress on the development and promotion of alternative methods. This document describes the recommendations of the ICCVAM Metrics Workgroup.
Authors
John D. Gordon, Carol Clarke, Matthew Johnson, Emily N. Reinke, Barnett A. Rattner, Steve Hwang, Evisabel Craig, Anna Lowit, Paul Brown, Karen L. Davis-Bruno, Annabelle Crusan, Suzanne Fitzpatrick, Jueichuan Kang, Robin Levis, Donna L. Mendrick, Jill Merrill, Brian Berridge, Warren Casey, Nicole Kleinstreuer, Harold Watson

Optimization of salt marsh management at the Stewart B. McKinney National Wildlife Refuge, Connecticut, through use of structured decision making Optimization of salt marsh management at the Stewart B. McKinney National Wildlife Refuge, Connecticut, through use of structured decision making

Structured decision making is a systematic, transparent process for improving the quality of complex decisions by identifying measurable management objectives and feasible management actions; predicting the potential consequences of management actions relative to the stated objectives; and selecting a course of action that maximizes the total benefit achieved and balances tradeoffs among
Authors
Laurel E. Low, Hilary A. Neckles, James E. Lyons, Jessica L. Nagel, Susan C. Adamowicz, Toni Mikula, Kristina Vagos, Richard Potvin

Crossroads of highly pathogenic H5N1: overlap between wild and domestic birds in the Black Sea-Mediterranean impacts global transmission Crossroads of highly pathogenic H5N1: overlap between wild and domestic birds in the Black Sea-Mediterranean impacts global transmission

Understanding transmission dynamics that link wild and domestic animals is a key element of predicting the emergence of infectious disease, an event that has highest likelihood of occurring wherever human livelihoods depend on agriculture and animal trade. Contact between poultry and wild birds is a key driver of the emergence of highly pathogenic avian influenza (HPAI), a process that...
Authors
Nichola J. Hill, Lacy M. Smith, Sabir B. Muzaffar, Jessica L. Nagel, Diann Prosser, Jeffery D. Sullivan, Kyle A. Spragens, Carlos A. DeMattos, Cecilia C. Demattos, Lu’ay El Sayed, Kiraz Erciyas-Yavuz, C. Todd Davis, Joyce Jones, Zoltan Kis, Ruben O. Donis, Scott H. Newman, John Y. Takekawa

Marsh equilibrium theory: Implications for responses to rising sea level Marsh equilibrium theory: Implications for responses to rising sea level

No abstract available.
Authors
James T Morris, Donald Cahoon, John C. Callaway, Christopher Craft, Scott C Neubauer, Nathaniel B Weston

Modeling areal measures of campsite impacts on the Appalachian National Scenic Trail to enhance ecological sustainability Modeling areal measures of campsite impacts on the Appalachian National Scenic Trail to enhance ecological sustainability

Campsite impacts in protected natural areas are most effectively minimized by a containment strategy that focuses use on a limited number of sustainable campsites that spatially concentrate camping activities. This research employs spatial autoregressive (SAR) modeling to evaluate the relative influence of use-related, environmental, and managerial factors on two salient measures of...
Authors
Johanna R. Arredondo, Jeffrey L. Marion, Fletcher P. Meadema, Jeremy F. Wimpey

Survival of Laysan Teal Anas laysanensis differs among island populations: Role of chronic avian botulism Survival of Laysan Teal Anas laysanensis differs among island populations: Role of chronic avian botulism

Monitoring demographic response over time is valuable for understanding population dynamics of endangered species. We quantified the variation in survival patterns for three small isolated island populations of endangered waterfowl in the Hawaiian Archipelago. Laysan Teal Anas laysanensis were individually marked and the fate of 1,150 individuals were followed from different cohorts...
Authors
Michelle H Reynolds, Jeffrey Hatfield, Karen Courtot, Cynthia Vanderlip

Research priorities for migratory birds under climate change—A qualitative value of information assessment Research priorities for migratory birds under climate change—A qualitative value of information assessment

The mission of the U.S. Geological Survey National Climate Adaptation Science Center is to provide actionable, management-relevant research on climate change effects on ecosystems and wildlife to U.S. Department of the Interior bureaus. Providing this kind of useful scientific information requires understanding how natural-resource managers make decisions and identifying research...
Authors
Madeleine A. Rubenstein, Clark S. Rushing, James E. Lyons, Michael C. Runge

A Bayesian framework for assessing extinction risk based on ordinal categories of population condition and projected landscape change A Bayesian framework for assessing extinction risk based on ordinal categories of population condition and projected landscape change

Many at-risk species lack standardized surveys across their range or quantitative data capable of detecting demographic trends. As a result, extinction risk assessments often rely on ordinal categories of risk based on explicit criteria or expert elicitation. This study demonstrates a Bayesian approach to assessing extinction risk based on this common data structure, using three...
Authors
Daniel Bruce Fitzgerald, Andrew R Henderson, Kelly O. Maloney, Mary Freeman, John A. Young, Amanda E. Rosenberger, David C. Kazyak, David R. Smith

Spatial capture–recapture with random thinning for unidentified encounters Spatial capture–recapture with random thinning for unidentified encounters

Spatial capture–recapture (SCR) models have increasingly been used as a basis for combining capture–recapture data types with variable levels of individual identity information to estimate population density and other demographic parameters. Recent examples are the unmarked SCR (or spatial count model), where no individual identities are available and spatial mark–resight (SMR) where...
Authors
Jose Jimenez, Ben Augustine, Daniel W. Linden, Richard B. Chandler, Andy Royle

The evolution of a tropical biodiversity hotspot The evolution of a tropical biodiversity hotspot

The role of the environment in the origin of new species has long been debated. Harvey et al.examined the evolutionary history and species diversity of suboscine birds in the tropics (see the Perspective by Morlon). Contrary to expectations that the tropics have higher rates of speciation, the authors observed that higher and more constant speciation rates occur in harsh environments...
Authors
Michael G Harvey, Gustavo A Bravo, Santiago Claramunt, Andres M Cuervo, Graham E Derryberry, Jaqueline Battilana, Glenn F Seeholzer, Jessica Shearer McKay, Brian C. O’Meara, Brant C Faircloth, Scott V Edwards, Jorge Perez-Eman, Robert G Moyle, Frederick H. Sheldon, Alexandre Aleixo, Brian T Smith, Terry Chesser, Luis F Silveira, Joel Cracraft, Robb T Brumfield, Elizabeth P Derryberry

Optimal sampling design for spatial capture‐recapture Optimal sampling design for spatial capture‐recapture

Spatial capture‐recapture (SCR) has emerged as the industry standard for estimating population density by leveraging information from spatial locations of repeat encounters of individuals. The precision of density estimates depends fundamentally on the number and spatial configuration of traps. Despite this knowledge, existing sampling design recommendations are heuristic and their...
Authors
Gates Dupont, J. Andrew Royle, Muhammad Ali Nawaz, Chris Sutherland
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