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Publications

Below is a list of WERC's peer-reviewed publications. If you are searching for a specific publication and cannot find it in this list, please contact werc_web@usgs.gov

Filter Total Items: 3745

Geographic principles applied to population dynamics: A spatially interpolated integrated population model Geographic principles applied to population dynamics: A spatially interpolated integrated population model

A major impediment to wildlife conservation and management, from a quantitative perspective, is dealing with high degrees of uncertainty associated with population estimates. Integrated population models (IPMs) can help alleviate that challenge, but they are often limited to narrow spatial or temporal windows owing to the financial and logistical burdens of acquiring requisite datasets...
Authors
Brian G. Prochazka, Peter S. Coates, Shawn T. O’Neil, Shawn P. Espinosa, Cameron L. Aldridge

From eDNA to decisions using a multi-method approach to restoration planning in streams From eDNA to decisions using a multi-method approach to restoration planning in streams

Reintroduction efforts are increasingly used to mitigate biodiversity losses, but are frequently challenged by inadequate planning and uncertainty. High quality information about population status and threats can be used to prioritize reintroduction and restoration efforts and can transform ad hoc approaches into opportunities for improving conservation outcomes at a landscape scale. We...
Authors
Andrea J. Adams, C. Kamoroff, Daniel R. Norton, Brian J. Halstead, R. L. Grasso, Patrick M. Kleeman, C. Mengelt, K. Powelson, T. Seaborn, C.S. Goldberg

Conservation genetics of the endangered California Freshwater Shrimp (Syncaris pacifica): Watershed and stream networks define gene pool boundaries Conservation genetics of the endangered California Freshwater Shrimp (Syncaris pacifica): Watershed and stream networks define gene pool boundaries

Understanding genetic structure and diversity among remnant populations of rare species can inform conservation and recovery actions. We used a population genetic framework to spatially delineate gene pools and estimate gene flow and effective population sizes for the endangered California Freshwater Shrimp Syncaris pacifica. Tissues of 101 individuals were collected from 11 sites in 5...
Authors
Abdul M. Ada, Amy G. Vandergast, Robert N. Fisher, Darren Fong, Andrew J. Bohonak

Status of greater sage-grouse in the Bi-State Distinct Population Segment—An evaluation of population trends, habitat selection, and efficacy of conservation actions Status of greater sage-grouse in the Bi-State Distinct Population Segment—An evaluation of population trends, habitat selection, and efficacy of conservation actions

Preface
Authors
Peter S. Coates, Megan C. Milligan, Brian G. Prochazka, Brianne E. Brussee, Shawn T. O’Neil, Carl G. Lundblad, Sarah C. Webster, Cali L. Weise, Steven R. Mathews, Michael P. Chenaille, Cameron L. Aldridge, Michael S. O’Donnell, Shawn P. Espinosa, Amy C. Sturgill, Kevin E. Doherty, John C. Tull, Katherine Miller, Lief A. Wiechman, Steve Abele, John Boone, Heather Stone, Michael L. Casazza

Egg mercury concentration and egg size varies with position in the laying sequence in two songbird species Egg mercury concentration and egg size varies with position in the laying sequence in two songbird species

In birds, mercury embryotoxicity can occur through the transfer of mercury from the female to her eggs. Maternal transfer of mercury can vary by egg position in the laying sequence, with first-laid eggs often exhibiting greater mercury concentrations than subsequently laid eggs. We studied egg mercury concentration, mercury burden (total amount of mercury in the egg), and egg...
Authors
C. Alex Hartman, Joshua T. Ackerman, Breanne Cooney, Mark P. Herzog

A comparison of eDNA sampling methods in an estuarine environment on presence of longfin smelt (Spirinchus thaleichthys) and fish community composition A comparison of eDNA sampling methods in an estuarine environment on presence of longfin smelt (Spirinchus thaleichthys) and fish community composition

The loss of tidal wetlands in the San Francisco Bay estuary have led to declines in native fish presence. Restoration of tidal wetlands in this area has intensified, with a primary goal of increasing the number of native fishes. We compared the presence of longfin smelt in naturally accreted and beneficial dredge reuse wetlands as a measure of successful restoration. We used...
Authors
Lizabeth Bowen, Shannon C. Waters-Dynes, Lyndsay L. Rankin, Karen M. Thorne, Daphne Gille, Susan De La Cruz, Isa Woo, Levi Lewis, Katie Karpenko, Cheryl Dean, Gregg Schumer

Best practices for genetic and genomic data archiving Best practices for genetic and genomic data archiving

Genetic and genomic data are collected for a vast array of scientific and applied purposes. Despite mandates for public archiving, data are typically used only by the generating authors. The reuse of genetic and genomic datasets remains uncommon because it is difficult, if not impossible, due to non-standard archiving practices and lack of contextual metadata. But as the new field of...
Authors
Deborah M. Leigh, Amy G. Vandergast, Margaret Hunter, Eric D. Crandall, W. Chris Funk, Colin J Garroway, Sean M. Hoban, Sara J. Oyler-McCance, Christian Rellstab, Gernot Segelbacher, Chloe Schmidt, Ella Vazquez-Dominguez, Ivan Paz-Vinas
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