Publications
This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.
Filter Total Items: 43044
Who spawns where? Temperature, elevation, and discharge differentially affect the distribution of breeding by six Pacific salmonids within a large river basin Who spawns where? Temperature, elevation, and discharge differentially affect the distribution of breeding by six Pacific salmonids within a large river basin
Within the geographic range of salmonid fishes, many apparently suitable rivers and streams are used for reproduction by some species but not others. This is widely known but seldom addressed, as studies often examine factors determining the distribution of one or only a few species. We examined physical factors associated with the spawning distribution of six native Pacific salmonids...
Authors
Catherine S Austin, Christian E. Torgersen, Thomas P. Quinn
Laboratory-derived bioaccumulation kinetic parameters for four per- and polyfluoroalkyl substances in freshwater mussels Laboratory-derived bioaccumulation kinetic parameters for four per- and polyfluoroalkyl substances in freshwater mussels
Although freshwater mussels are imperiled and identified as key conservation priorities, limited bioaccumulation information is available on these organisms for contaminants of emerging concern. In the present study we investigated the bioaccumulation of per- and polyfluoroalkyl substances (PFAS) in the model freshwater pond mussel Sagittunio subrostratus because mussels provide...
Authors
Jeffery A. Steevens, Rebecca A. Consbrock, Eric Brunson, James L. Kunz, Erin L. Pulster, Rebekah S. Burket, Kevin M. Stroski, Jaylen L. Sims, Matt F. Simcik, Bryan W. Brooks
Isotopic niche of New Jersey terrapins suggests intraspecific resource partitioning, and little variability following a major hurricane Isotopic niche of New Jersey terrapins suggests intraspecific resource partitioning, and little variability following a major hurricane
Diamondback terrapins (Malaclemys terrapin) are sexually dimorphic generalist turtles that inhabit salt marshes and estuaries along the Atlantic and Gulf coasts of the United States. On October 29th, 2012, Hurricane Sandy made landfall in New Jersey, USA, directly impacting terrapin populations inhabiting central and southern Barnegat Bay. To examine potential food web mediated impacts...
Authors
Mathew Denton, Kristen Hart, John Wnek, Sarah A. Moss, Harold W. Avery
Techniques for restoring damaged Mojave and western Sonoran ecosystems, including those for threatened desert tortoises and Joshua trees Techniques for restoring damaged Mojave and western Sonoran ecosystems, including those for threatened desert tortoises and Joshua trees
Ecological restoration has potential for contributing to conservation activities for threatened Mojave desert tortoises (Gopherus agassizii) and Joshua trees (Yucca brevifolia, Y. jaegeriana) and their broader ecosystems in the Mojave and western Sonoran deserts. To be effective, restoration actions deployed strategically need to halt and reverse habitat degradation, replenish or enhance...
Authors
Scott R Abella, Kristin H. Berry, Stefanie Ferrazzano
A multi-level assessment of biological effects associated with mercury concentrations in smallmouth bass, Micropterus dolomieu A multi-level assessment of biological effects associated with mercury concentrations in smallmouth bass, Micropterus dolomieu
Total mercury (THg) was measured in muscle (fillet) and liver tissue of adult smallmouth bass Micropterus dolomieu collected at multiple sites in the Potomac and Susquehanna River drainages within the Chesapeake Bay watershed. Smallmouth bass in these drainages have experienced episodic mortality events, a high prevalence of skin lesions and reproductive endocrine disruption (intersex or
Authors
Vicki S. Blazer, Heather L. Walsh, Adam Sperry, Brenna Raines, James Willacker, Collin A. Eagles-Smith
First investigations on lamprey responses to elevated total dissolved gas exposure and risk of gas bubble trauma First investigations on lamprey responses to elevated total dissolved gas exposure and risk of gas bubble trauma
A flexible spill program in the federal Columbia River power system increased the total dissolved gas (TDG) water quality standards (i.e., the gas cap) from 120% to 125%. Spill is used to pass juvenile salmon (Oncorhynchus spp.) over dams, but it can generate elevated TDG, and exposed fish can develop gas bubble trauma (GBT) or experience mortality. Juvenile salmon are monitored for GBT...
Authors
Theresa L. Liedtke, Kenneth Tiffan, Lisa K. Weiland, Brian K. Ekstrom
U.S. Geological Survey invasive carp strategic framework, 2023–27 U.S. Geological Survey invasive carp strategic framework, 2023–27
U.S. Geological Survey (USGS) research has supported management of Hypophthalmichthys nobilis (bighead carp), Mylopharyngodon piceus (black carp), Ctenopharyngodon idella (grass carp), and H. molitrix (silver carp), hereafter referred to collectively as invasive carps, for over a decade. This strategic framework identifies thematic research areas to guide funding decisions for USGS...
Authors
Duane Chapman, Jon Amberg, Robin D. Calfee, Enrika Hlavacek, Jon Hortness, P. Ryan Jackson, David C. Kazyak, Brent C. Knights, James J. Roberts
U.S. Geological Survey science to support wildlife disease management U.S. Geological Survey science to support wildlife disease management
Introduction The U.S. Geological Survey (USGS) serves a principal role in conducting wildlife disease outbreak investigations, surveillance, and ecological research to support management of diseases in free-ranging native wildlife. Approximately 60 percent of emerging human infectious diseases such as COVID-19, are zoonotic, meaning they are transmitted between animals and humans and 70...
Authors
M. Camille Hopkins, Suzanna C. Soileau
Simulating the migration dynamics of juvenile salmonids through rivers and estuaries using a hydrodynamically driven enhanced particle tracking model Simulating the migration dynamics of juvenile salmonids through rivers and estuaries using a hydrodynamically driven enhanced particle tracking model
Juvenile salmonids migrate hundreds of kilometers from their natal streams to mature in the ocean. Throughout this migration, they respond to environmental cues such as local water velocities and other stimuli to direct and modulate their movements, often through heavily modified riverine and estuarine habitats. Management strategies in an uncertain future of climate change and altered...
Authors
Vamsi Krishna Sridharan, Doug Jackson, Andrew M. Hein, Russell W. Perry, Adam C. Pope, Noble Hendrix, Eric M. Danner, Steven T. Lindley
The changing dynamics of highly pathogenic avian influenza H5N1: Next steps for management & science in North America The changing dynamics of highly pathogenic avian influenza H5N1: Next steps for management & science in North America
Highly pathogenic avian influenza virus (HPAIV) H5N1 was introduced in North America in late 2021 through trans-Atlantic pathways via migratory birds. These introductions have resulted in an unprecedented epizootic, a widespread disease event in animals, heavily affecting poultry, wild birds, and recently mammals. The North American incursions occurred during the largest epidemic season...
Authors
Johanna Harvey, Jennifer M. Mullinax, Michael C. Runge, Diann Prosser
Nitrogen-bedrock interactions regulate multi-element nutrient limitation and sustainability in forests Nitrogen-bedrock interactions regulate multi-element nutrient limitation and sustainability in forests
Nutrient limitation of tree growth can intensify when nutrients are lost to forest harvest, creating challenges for forest growth and sustainability. Forest harvest accelerates nutrient loss by removing nutrient-containing biomass and by increasing nutrient leaching, shaping patterns of nutrient depletion that cause long-term shifts in nutrient limitation. Nitrogen most frequently limits...
Authors
Kaveh G. Siah, Steven S. Perakis, Julie C. Pett-Ridge, Gregory van der Heijden
Potential effects of habitat change on migratory bird movements and avian influenza transmission in the East Asian-Australasian Flyway Potential effects of habitat change on migratory bird movements and avian influenza transmission in the East Asian-Australasian Flyway
Wild waterbirds, and especially wild waterfowl, are considered to be a reservoir for avian influenza viruses, with transmission likely occurring at the agricultural-wildlife interface. In the past few decades, avian influenza has repeatedly emerged in China along the East Asian-Australasian Flyway (EAAF), where extensive habitat conversion has occurred. Rapid environmental changes in the...
Authors
John Takekawa, Diann Prosser, Jeffery D. Sullivan, Shenglai Yin, Xinxin Wang, Geli Zhang, Xiangming Xiao