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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 42707

Evaluation of breeding distribution and chronology of North American scoters Evaluation of breeding distribution and chronology of North American scoters

North America's scoter species are poorly monitored relative to other waterfowl. Black Melanitta americana, surf M. perspicillata, and white-winged M. deglandi scoter abundance and trend estimates are thus uncertain in many parts of these species' ranges. The most extensive source of waterfowl abundance and distribution data in North America is the Waterfowl breeding population and...
Authors
Kristin Bianchini, Scott G. Gilliland, Alicia Berlin, Timothy D. Bowman, W. Sean Boyd, Susan E.W. De La Cruz, Daniel Esler, Joseph R. Evenson, Paul L. Flint, Christine Lepage, Scott R. McWilliams, Dustin E. Meattey, Jason E. Osenkowski, Matthew Perry, Jean-Francois Poulin, Eric T. Reed, Christian Roy, Jean-Pierre L. Savard, Lucas Savoy, Jason L Schamber, Caleb S. Spiegel, John Takekawa, David H. Ward, Mark L. Mallory

Development of a Surface-Water Index of Permanence to assess surface-water availability for ecohydrological refugia Development of a Surface-Water Index of Permanence to assess surface-water availability for ecohydrological refugia

Surface-water availability has major implications for the environment and society in the 21st century. With climate change, increased drought severity, and altered water and land use, future water availability is predicted to continue to decline in many areas, including much of the western United States. An understanding of where and when water will be available at multiple scales is...
Authors
Alynn Martin, Roy Sando, Lindsey Thurman, Kyle McLean, Patrick Wurster, John Jones, Anteneh Sarbanes

Hydrologic, water operations, reservoir temperature, river temperature, sediment transport, habitat, and fish population modeling for the Trinity River Water Management Plan Hydrologic, water operations, reservoir temperature, river temperature, sediment transport, habitat, and fish population modeling for the Trinity River Water Management Plan

Humboldt County is developing a Water Management Plan that will describe a range of proposed annual releases from Trinity Reservoir consistent with the 1959 water delivery contract between Humboldt County and the U.S. Bureau of Reclamation (Reclamation). The 1959 contract states that Reclamation shall release not less than an annual quantity of 50,000 acre-feet into the Trinity River for...
Authors
John Plumb, Russell Perry

Growth performance of Rainbow Trout in reservoir tributaries and implications for steelhead growth potential above Skagit River dams Growth performance of Rainbow Trout in reservoir tributaries and implications for steelhead growth potential above Skagit River dams

Objective In the Pacific Northwest (USA), Pacific salmon Oncorhynchus spp. populations have been declining significantly for decades, prompting stakeholders to respond with a variety of conservation and restoration measures. One such measure being considered in the Skagit River basin (Washington, USA) is the introduction of steelhead Oncorhynchus mykiss (anadromous Rainbow Trout) above...
Authors
Benjamin Lorenz Jensen, Rachelle Carina Johnson, Jeffrey J. Duda, Carl Ostberg, Tessa Julianne Code, Jonathan H Mclean, Karl D. Stenberg, Kimberly Larsen, Marshal Hoy, David Beauchamp

Unraveling mechnisms underlying effects of wetting–drying cycles on soil respiration in a dryland Unraveling mechnisms underlying effects of wetting–drying cycles on soil respiration in a dryland

Rewetting of dry soils usually stimulates soil carbon (C) emission, a phenomenon known as the Birch effect. Soil C cycling in drylands, which store approximately one third of terrestrial soil organic C (SOC), is strongly affected by wetting–drying cycles. However, the physical, chemical, and biological mechanisms that link rewetting cycles with dryland soil C cycling have not been...
Authors
Guopeng Liang, Sasha C. Reed, John M. Stark, Bonnie G. Waring

Linking water use efficiency with water use strategy from leaves to communities Linking water use efficiency with water use strategy from leaves to communities

Limitations and utility of three measures of water use characteristics were evaluated: water use efficiency (WUE), intrinsic WUE and marginal water cost of carbon gain (aE/aA) estimated, respectively, as ratios of assimilation (A) to transpiration (E), of A to stomatal conductance (gs) and of sensitivities of E and A with variation in gs. Only the measure aE/aA estimates water use...
Authors
Jie Liang, Ken Krauss, John Finnigan, Hilary Stuart-Williams, Graham D. Farquhar, Marilyn C. Ball

Twenty-five years of change in forest structure and nesting behavior of Hawaiʻi ʻelepaio Twenty-five years of change in forest structure and nesting behavior of Hawaiʻi ʻelepaio

Long-term ecological studies are invaluable for detecting changes over time. Forest restoration has been a conservation priority in Hawaiʻi, where invasive species have negatively impacted native bird habitat. During 1993–1994, a study was conducted of Hawaiʻi ʻelepaio (Chasiempis sandwichensis) nest site selection and forest composition in mesic montane forest along Mauna Loa Road in...
Authors
Kelly Jaenecke, Paul C. Banko, Robert W. Peck, Zee Sarr, Nicholas Shema

Geomorphic classification framework for assessing reproductive ecology of Scaphirhynchus albus (pallid sturgeon), Fort Peck segment, Upper Missouri River, Montana and North Dakota Geomorphic classification framework for assessing reproductive ecology of Scaphirhynchus albus (pallid sturgeon), Fort Peck segment, Upper Missouri River, Montana and North Dakota

The segment of the Upper Missouri River between Fort Peck Dam and the headwaters of Lake Sakakawea is home to a population of the endangered Scaphirhynchus albus (pallid sturgeon). Lack of population growth (recruitment failure) has been attributed to inadequate dispersal distance of larvae between spawning locations and the headwaters of Lake Sakakawea, where conventional wisdom holds...
Authors
Robert B. Jacobson, Caroline M. Elliott, Edward Bulliner

Application of the Stream Salmonid Simulator (S3) model to assess fall Chinook salmon (Oncorhynchus tshawytscha) production in the American River, California Application of the Stream Salmonid Simulator (S3) model to assess fall Chinook salmon (Oncorhynchus tshawytscha) production in the American River, California

Executive Summary Anadromous fish returning to the lower American River are restricted to 36 kilometers of free-flowing river between Nimbus Dam and American River’s confluence with the Sacramento River, California. Salmon in the American River provide an important freshwater recreational fishery. However, annual salmon production in the American River in recent years has been low...
Authors
John M. Plumb, Russell W. Perry, Tyson W. Hatton, Collin D. Smith, John M. Hannon

Toward invasive mussel genetic biocontrol: Approaches, challenges, and perspectives Toward invasive mussel genetic biocontrol: Approaches, challenges, and perspectives

Invasive freshwater mussels, such as the zebra (Dreissena polymorpha), quagga (Dreissena rostriformis bugensis), and golden (Limnoperna fortunei) mussel have spread outside their native ranges throughout many regions of the North American, South American, and European continents in recent decades, damaging infrastructure and the environment. This review describes ongoing efforts by...
Authors
Victor H. Hernandez Elizarraga, Scott Ballantyne, Lindsey Gengelbach, Juliana A. Americo, Steven T. Suhr, Marie-Claude Senut, Ben Minerich, Christopher M. Merkes, Thea M. Edwards, Katy E. Klymus, Cathy A. Richter, Diane L. Waller, Yale J. Passamaneck, Mauro de F. Rebelo, Daryl M. Gohl

Using explainable machine learning methods to evaluate vulnerability and restoration potential of ecosystem state transitions Using explainable machine learning methods to evaluate vulnerability and restoration potential of ecosystem state transitions

Ecosystem state transitions can be ecologically devastating or be a restoration success. State transitions are common within aquatic systems worldwide, especially considering human-mediated changes to land use and water use. We created a transferable conceptual framework to enable multiscale assessments of state resilience and early warnings of state transitions that can inform strategic
Authors
John Delaney, Danelle M. Larson
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