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Publications

Find out more about Biological Threat and Invasive Species Research through our publications.

Filter Total Items: 316

Identifying common decision problem elements for the management of emerging fungal diseases of wildlife Identifying common decision problem elements for the management of emerging fungal diseases of wildlife

Emerging infectious diseases (EIDs) of wildlife have characteristics that make them difficult to manage, leading to reactive and often ineffective management strategies. Currently, two fungal pathogens, Pseudogymnoascus destructans (Pd) and Batrachochytrium salamandrivorans (Bsal), are causing declines in novel host species. To improve the application of management strategies addressing...
Authors
R. F. Bernard, Evan H. Campbell Grant

Efficacy of eDNA as an early detection indicator for Burmese pythons in the ARM Loxahatchee National Wildlife Refuge in the Greater Everglades Ecosystem Efficacy of eDNA as an early detection indicator for Burmese pythons in the ARM Loxahatchee National Wildlife Refuge in the Greater Everglades Ecosystem

Environmental DNA (eDNA) detection of invasive species can be used to delimited occupied ranges and estimate probabilities to inform management decisions. Environmental DNA is shed into the environment through skin cells and bodily fluids and can be detected in water samples collected from lakes, rivers, and swamps. In south Florida, invasive Burmese pythons occupy much of the Greater...
Authors
Margaret Hunter, Gaia Meigs-Friend, Jason Ferrante, Brian Smith, Kristen Hart

Environmental DNA sampling reveals high occupancy rates of invasive Burmese pythons at wading bird breeding aggregations in the central Everglades Environmental DNA sampling reveals high occupancy rates of invasive Burmese pythons at wading bird breeding aggregations in the central Everglades

The Burmese python (Python bivittatus) is now established as a breeding population throughout south Florida, USA. However, the extent of the invasion, and the ecological impacts of this novel apex predator on animal communities are incompletely known, in large part because Burmese pythons (hereafter “pythons”) are extremely cryptic and there has been no efficient way to detect them...
Authors
Sophia C. M. Orzechowski, Peter C. Frederick, Robert M. Dorazio, Margaret Hunter

Skin and fin diseases Skin and fin diseases

Fish are critically important to the welfare of this planet and its occupants, the health of both wild and captive fish populations paramount to our survival. This book presents the gross pathology of the most commonly encountered diseases and syndromes of fish in an organ system-based approach. It provides an overview of the diseases and disorders of tropical, ornamental, bait and food...
Authors
Pedro Smith, Diane Elliott, David W Bruno, Stephen A Smith

Mortality due to Tyzzer's disease of muskrats in northern Ohio, USA Mortality due to Tyzzer's disease of muskrats in northern Ohio, USA

In 2017, we investigated a mortality event of muskrat (Ondatra zibethicus) in Northwest Ohio, USA, and determined the causes of death to be from Tyzzer's disease due to Clostridium piliforme and Klebsiella pneumoniae septicemia. The gross presentation resembled tularemia, which highlighted the importance of a complete diagnostic investigation.
Authors
Daniel A. Grear, Julia S. Lankton, Sara Zaleski, Mark Witt, Jeffrey M. Lorch

Development of a quantitative PCR method for screening ichthyoplankton samples for bigheaded carps Development of a quantitative PCR method for screening ichthyoplankton samples for bigheaded carps

Monitoring ichthyoplankton is useful for identifying reproductive fronts and spawning locations of bigheaded carps (Hypophthalmichthys spp.). Unfortunately, sorting and identifying ichthyoplankton to monitor for bigheaded carp reproduction is time consuming and expensive. Traditional methods require frequent egg-larvae sampling, sorting of all samples to obtain presumptively identified...
Authors
Andrea K. Fritts, Brent C. Knights, James H. Larson, Jon Amberg, Christopher M. Merkes, Tariq Tajjioui, Steven E. Butler, Matthew J. Diana, David H. Wahl, Michael J. Weber, John D. Waters

Complete genome sequences of the index isolates of two genotypes of Pacific salmon paramyxovirus Complete genome sequences of the index isolates of two genotypes of Pacific salmon paramyxovirus

We report here the genome sequences of two index strains of Pacific salmon paramyxovirus isolated in 1982 and 1983 from adult salmon in Oregon. The isolates are most closely related to Atlantic salmon paramyxovirus, the type species of the genus Aquaparamyxovirus, but are sufficiently distinct to be considered two genotypes of a novel species.
Authors
James Winton, William N. Batts, Rachel L. Powers, Maureen K. Purcell

The glycoprotein, non-virion protein, and polymerase of viral hemorrhagic septicemia virus are not determinants of host-specific virulence in rainbow trout The glycoprotein, non-virion protein, and polymerase of viral hemorrhagic septicemia virus are not determinants of host-specific virulence in rainbow trout

Viral hemorrhagic septicemia virus (VHSV), a fish rhabdovirus belonging to the Novirhabdovirus genus, causes severe disease and mortality in many marine and freshwater fish species worldwide. VHSV isolates are classified into four genotypes and each group is endemic to specific geographic regions in the north Atlantic and Pacific Oceans. Most viruses in the European VHSV genotype Ia are...
Authors
Shamila Yusuff, Gael Kurath, Min Sun Kim, Tarin M Tesfaye, Jie Liu, Douglas Mckenney, Vikram N Vakharia

Disease‐structured N‐mixture models: A practical guide to model disease dynamics using count data Disease‐structured N‐mixture models: A practical guide to model disease dynamics using count data

Obtaining inferences on disease dynamics (e.g., host population size, pathogen prevalence, transmission rate, host survival probability) typically requires marking and tracking individuals over time. While multistate mark–recapture models can produce high‐quality inference, these techniques are difficult to employ at large spatial and long temporal scales or in small remnant host...
Authors
Graziella V. DiRenzo, Christian Che-Castaldo, Sarah P. Saunders, Evan H. Campbell Grant, Elise F. Zipkin

Complex immune responses and molecular reactions to pathogens and disease in a desert reptile (Gopherus agassizii) Complex immune responses and molecular reactions to pathogens and disease in a desert reptile (Gopherus agassizii)

Immune function plays an important role in an animal's defense against infectious disease. In reptiles, immune responses may be complex and counterintuitive, and diagnostic tools used to identify infection, such as induced antibody responses are limited. Recent studies using gene transcription profiling in tortoises have proven useful in identifying immune responses to various intrinsic...
Authors
K. Kristina Drake, Christina M. Aiello, Lizabeth Bowen, Rebecca L. Lewison, Todd Esque, Kenneth E. Nussear, Shannon C. Waters-Dynes, Peter J. Hudson

Phylogeography and evolution of infectious hematopoietic necrosis virus in China Phylogeography and evolution of infectious hematopoietic necrosis virus in China

Infectious hematopoietic necrosis virus (IHNV) is a well-known rhabdoviral pathogen of salmonid fish. In this study, a comprehensive analysis of 40 IHNV viruses isolated from thirteen fish farms in nine geographically dispersed Chinese provinces during 2012 to 2017 is presented. Identity of nucleotide and amino acid sequences among all the complete glycoprotein (G) genes from Chinese...
Authors
Liming Xu, Jingzhuang Zhao, Miao Liu, Gael Kurath, Rachel B. Breyta, Guangming Ren, Jiasheng Yin, Hongbai Liu, Tongyan Lu

Wasting disease and static environmental variables drive sea star assemblages in the northern Gulf of Alaska Wasting disease and static environmental variables drive sea star assemblages in the northern Gulf of Alaska

Sea stars are ecologically important in rocky intertidal habitats where they can play an apex predator role, completely restructuring communities. The recent sea star die-off throughout the eastern Pacific, known as Sea Star Wasting Disease, has prompted a need to understand spatial and temporal patterns of sea star assemblages and the environmental variables that structure these...
Authors
Brenda Konar, Timothy J. Mitchell, K. Iken, Thomas Dean, Daniel Esler, Mandy Lindeberg, Benjamin Pister, Ben P. Weitzman
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