Publications

The sediments in the Calcasieu Estuary are contaminated with a wide variety of chemicals of potential concern (COPCs), including heavy metals, polycyclic aromatic hydrocarbons, polychlorinated biphenyls, phthalates, chlorinated benzenes, and polychlorinated dibenzo-p-dioxins and dibenzofurans. The sources of these COPCs include both point and non-point source discharges. As part of a...

Polymerase chain reaction (PCR)-based methods to determine the sex of birds are well established and have seen few modifications since they were first introduced in the 1990s. Although these methods allowed for sex determination in species that were previously difficult to analyse, they were not conducive to high-throughput analysis because of the laboriousness of DNA extraction and gel

Many National Wildlife Refuges (Refuges) have impaired water quality resulting from historic and current land uses, upstream sources, and aerial pollutant deposition. Competing duties limit the time available for Refuge staff to identify and evaluate potential water quality issues. As a result, water quality–related issues may not be resolved until a problem has already arisen. This...

This report presents analyses of suspended sediment and organic contaminants measured during a two-year study of the San Lorenzo River, central California, which discharges into the Pacific Ocean within the Monterey Bay National Marine Sanctuary. Most suspended-sediment transport occurred during flooding caused by winter storms; 55 percent of the sediment load was transported by the...

The Meramec River Basin in east-central Missouri is an important stronghold for native freshwater mussels (Order: Unionoida) in the United States. Whereas the basin supports more than 40 mussel species, previous studies indicate that the abundance and distribution of most species are declining. Therefore, resource managers have identified the need to prioritize threats to native mussel...

The Washington Department of Ecology annually determines the quality of recently deposited sediments in Puget Sound as a part of Ecology's Urban Waters Initiative. The annual sediment quality studies use the Sediment Quality Triad (SQT) approach, thus relying on measures of chemical contamination, toxicity, and benthic in-faunal effects (Chapman, 1990). Since 2002, the studies followed a...

This release provides the numerical results of the fractal analyses discussed in Zawada and others (2010) for the Navassa Island reefscape. The project represents the continuation of a U.S. Geological Survey (USGS) research effort begun in 2006 (Zawada and others, 2006) to understand the patterns and scalability of roughness and topographic complexity from individual corals to complete...

Pore water from coastal beach and marsh sediments from the northern Gulf of Mexico, pre- and post-landfall of the Deepwater Horizon oil release, were collected and evaluated for toxicity with the sea urchin fertilization and embryological development assays. There were 17 pre-landfall samples and 49 post-landfall samples tested using both assays. Toxicity was determined in four pre...

Three sets of effects-based sediment-quality guidelines (SQGs) were evaluated to support the selection of sediment-quality benchmarks for assessing risks to benthic invertebrates in the Calcasieu Estuary, Louisiana. These SQGs included probable effect concentrations (PECs), effects range median values (ERMs), and logistic regression model (LRMs)-based T50 values. The results of this...

This chapter provides an overview of the linkages between hydrology and biogeochemistry in terrestrial and aquatic systems. Selected topics include hydrological pathways on drainage basin slopes, mountain environments, within-river (or in-stream) processes, wetlands, groundwater (and groundwater–surface water interactions), and lakes. Beginning from catchment headwaters, This chapter...

Acute and chronic toxicity of copper (Cu) to a unionid mussel (Villosa iris) and a cladoceran (Ceriodaphnia dubia) were determined in water exposures at four concentrations of dissolved organic carbon (DOC; nominally 0.5, 2.5, 5, and 10 mg/L as carbon [C]). Test waters with DOC concentrations of 2.5 to 10 mg C/L were prepared by mixing a concentrate of natural organic matter (Suwannee...

We surveyed four Chesapeake Bay tributaries for skin and liver tumors in brown bullhead (Ameiurus nebulosus). We focused on the South River, where the highest skin tumor prevalence (53%) in the Bay watershed had been reported. The objectives were to 1) compare tumor prevalence with nearby rivers (Severn and Rhode) and a more remote river (Choptank); 2) investigate associations between...