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Publications

Browse publications authored by our scientists.  Publications available are: USGS-authored journal articles, series reports, book chapters, other government publications, and more. **Disclaimer: The views expressed in Non-USGS publications are those of the author and do not represent the views of the USGS, Department of the Interior, or the U.S. Government.

Filter Total Items: 4348

A video monitoring and computational system for estimating migratory juvenile fish abundance in river systems

Diadromous fishes migrate between marine and fresh waters for reproduction. For anadromous species, which spawn in freshwater, improved access to freshwater spawning and nursery habitats and ability of juveniles to emigrate to the ocean may support population recovery. Despite the potentially enormous influence of early life stage survival on adult population size, managers and scientists have lim
Authors
Meghna N. Marjadi, Sidney Batchelder, Ryan Govostes, Allison H. Roy, John J. Sheppard, Meghan-Grace Slocombe, Joel K. Llopiz

Evaluating effectiveness of restoration to address current stressors to riverine fish

River restoration programmes with the goal of conserving and rehabilitating inland fishes have a multi-decadal history, but evaluation and synthesis of past restoration actions have been limited by a lack of monitoring and reporting. Given that calls for both monitoring and systematic reviews of restoration have increased, we were interested in the influence that restoration has had on improving c
Authors
Jane Rogosch, Hadley I. A. Boehm, Ralph W. Tingley, Kiah D. Wright, Elisabeth B. Webb, Craig P. Paukert

Quantifying the relative importance of biotic and abiotic factors in landscape-based models of stream fish distributions

Lotic fish species distributions are frequently predicted using remotely sensed habitat variables that characterize the adjacent landscape and serve as proxies for instream habitat. Recent advancements in statistical methodology, however, allow for leveraging fish assemblage data when predicting distributions. This is important because assemblage composition likely provides better information abou
Authors
Christopher A. Custer, Douglas P. Fischer, Geoffrey Smith, Aaron Henning, Megan Kepler Schall, Matthew K. Shank, Timothy A. Wertz, Daniel A. Isermann

Prion forensics: A multidisciplinary approach to investigate CWD at an illegal deer carcass disposal site

Infectious prions are resistant to degradation and remain infectious in the environment for several years. Chronic wasting disease (CWD) has been detected in cervids inhabiting North America, the Nordic countries, and South Korea. CWD-prion spread is partially attributed to carcass transport and disposal. We employed a forensic approach to investigate an illegal carcass dump site connected with a
Authors
Marc D. Schwabenlander, Jason C. Bartz, Michelle Carstensen, Alberto Fameli, Linda Glaser, Roxanne J. Larsen, Manci Li, Rachel L. Shoemaker, Gage Rowden, Suzanne Stone, W. David Walter, Tiffany M. Wolf, Peter A. Larsen

Survival and growth of larval Pallid Sturgeon are improved by a live diet

ObjectiveConservation propagation facilities in the upper basin of the Missouri River are currently experiencing inconsistent survival of first-feeding larval Pallid Sturgeon Scaphirhynchus albus among genetic families (i.e., distinct male–female pairings). The inconsistent survival can have unintended negative consequences for genetic representation of Pallid Sturgeon that are returned to the Mis
Authors
Hilary B. Treanor, Christopher S. Guy, Jason E. Ilgen, Wendy M. Sealey, Addison T. Dove, Molly A. H. Webb

Unique diet and Philonema sp. infections in reservoir-rearing juvenile Chinook Salmon

ObjectiveDams and reservoirs can alter juvenile growth and survival of migratory salmonids through several physical and biological mechanisms. Juvenile Chinook Salmon Oncorhynchus tshawytscha that are produced upstream of large hydropower dams may have associated passage mortality, but the reservoirs created by these dams can support rapid growth. Characterizing the biotic drivers of growth and mo
Authors
Marina S. Larson, Anindo Choudhury, Ethan N. Gardner, Peter Konstantinidis, Christina Amy Murphy, Michael L. Kent, James Peterson, Claire E. Couch

Treat yourself: Pilot testing a new method to treat mange in wild carnivores

Mange is a skin disease caused by mites that parasitize an animal's skin, often yielding inflamed immune responses and hair loss. At a population level, mange may reduce survival and cause population declines. Many forms of mange can be treated quite effectively when an animal is in hand; however, this is not often feasible for many free-ranging wildlife populations. Some animals, particularly ter
Authors
David Edward Ausband, Peter F. Rebholz, Joanne G. Moriarty, Seth P. D. Riley

Habitat use of anadromous and amphidromous sturgeons in North America: A systematic review

Sturgeons are among the most endangered fishes in the world. Identifying habitat use characteristics to inform restoration projects is crucial for recovery. However, small sample sizes, inadequate replication of studies, and limited spatial extents complicate our ability to effectively apply the findings of single studies to endangered species conservation across the larger riverscape. We synthesi
Authors
Erin K. Gilligan-Lunda, Adam Duarte, James Peterson

Wildlife stewardship on Tribal lands: Our place is in our soul By Serra J. Hoagland and Steven Albert (Eds.), Baltimore, Maryland: Johns Hopkins University Press. 2023. pp. 432. $59.95 (hardcover). ISBN 978-1-4214-4657-8

Despite thousands of years of land stewardship by Indigenous Peoples, Western ideology and science predominantly influences wildlife management in North America today. Indigenous science and Traditional Ecological Knowledge (TEK) extend beyond the scope of Western science and ecological understanding to include knowledge derived from generations of people living as part of ecosystems (Rinkevich 20
Authors
Johanna M. H. Ford, Ambar A. Melendez Perez, Lindsey A. W. Gapinski, Juliana M. Kaloczi, Michael Rohde, Taylor Siddons, Riggs O. Wilson, Aaron A. Yappert, Robert W. Klaver

Hunting mode and habitat selection mediate the success of human hunters

BackgroundAs a globally widespread apex predator, humans have unprecedented lethal and non-lethal effects on prey populations and ecosystems. Yet compared to non-human predators, little is known about the movement ecology of human hunters, including how hunting behavior interacts with the environment.MethodsWe characterized the hunting modes, habitat selection, and harvest success of 483 rifle hun
Authors
Kaitlyn M. Gaynor, Michael (Alex) C Mcinturff, Briana L. Abrahms, Alison M. Smith, Justin S. Brashares

High-quality, chromosome-level reference genomes of the viviparous Caribbean skinks Spondylurus nitidus and S. culebrae

New World mabuyine skinks are a diverse radiation of morphologically cryptic lizards with unique reproductive biologies. Recent studies examining population-level data (morphological, ecological, and genomic) have uncovered novel biodiversity and phenotypes, including the description of dozens of new species and insights into the evolution of their highly complex placental structures. Beyond the p
Authors
Danielle Rivera, James B. Henderson, Athena W. Lam, Nathan J. Hostetter, Jaime A. Collazo, Rayna C. Bell

Passive acoustic monitoring and convolutional neural networks facilitate high-resolution and broadscale monitoring of a threatened species

Population monitoring is an essential component of biodiversity conservation and management, but low detection probabilities for rare and/or cryptic species makes estimating abundance and occupancy challenging. Passive acoustic monitoring combined with machine learning algorithms represents a potential path forward to effectively and efficiently monitor the occurrence of rare vocalizing species ac
Authors
Adam Duarte, Matthew J. Weldy, Damon B. Lesmeister, Zachary J. Ruff, Julianna M.A. Jenkins, Jonathon Joseph Valente, Matthew G. Betts
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