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Publications

Browse publications authored by our scientists.  Publications available are: USGS-authored journal articles, series reports, book chapters, other government publications, and more. 

 

**Disclaimer: The views expressed in Non-USGS publications are those of the author and do not represent the views of the USGS, Department of the Interior, or the U.S. Government.

Filter Total Items: 5203

Model‐based decomposition of spatially varying temporal shifts in seasonal streamflow across north temperate US rivers. Model‐based decomposition of spatially varying temporal shifts in seasonal streamflow across north temperate US rivers.

Anthropogenically forced climate shifts disrupt the seasonal behavior of climatic and hydrologic processes. The seasonality of streamflow has significant implications for the ecology of riverine ecosystems and for meeting societal demands for water resources. We develop a hierarchical Bayesian model of daily streamflow to quantify how the shape of annual hydrographs are changing and to...
Authors
Kevin M. Collins, Erin M. Schliep, Tyler Wagner, Christopher K. Wikle

Population structure and movement dynamics of Redband Trout in the Kootenai River basin Population structure and movement dynamics of Redband Trout in the Kootenai River basin

Redband Trout Oncorhynchus mykiss gairdneri is a species of high conservation concern in the Kootenai River basin, United States and Canada. However, identifying the specific mechanisms influencing Redband Trout is difficult as its life history structure is largely unknown. Using otolith microchemistry analysis, we found that 18.5% (n = 66) of the fish sampled (n = 329) were a product of...
Authors
Courtnie L. Ghere, Malte Willmes, Ryan S. Hardy, Tyler J. Ross, James Dunnigan, Sean Wilson, Scott Carleton, Michael C. Quist

Breeder turnover, harvest, and food affect recruitment of young nonbreeders in groups of gray wolves Breeder turnover, harvest, and food affect recruitment of young nonbreeders in groups of gray wolves

Groups of cooperative breeders typically have social hierarchies, with breeders at the top guiding group decisions and influencing the behavior of subordinates in the group. Because of breeders' strong influence on group dynamics and behaviors, breeder turnover can affect the survival of remaining group members. We lack a solid understanding of the nuanced but important effects of...
Authors
David Edward Ausband

A comparison of deep-sea coral and sponge species distribution models and the impact of ocean currents in the Southern California Bight A comparison of deep-sea coral and sponge species distribution models and the impact of ocean currents in the Southern California Bight

Deep-sea corals and sponges (DSCS) are signature taxa of deep-water habitats, but ecological mechanisms that drive their geographic distributions can be difficult to uncover due to the challenges of surveying deep-water ecosystems and limited oceanographic data. A comparison of species distribution models was made for three DSCS (Antipathes dendochristos, Plumarella longispina, and an...
Authors
Nissa Kreidler, Andre Buchheister, David D. Huff, Jerome Fiechter, Mary Yoklavich, Mark J. Henderson

Factors influencing spatial and temporal patterns of Lanius ludovicianus (Loggerhead Shrike) occupancy at a grassland-sagebrush ecotone Factors influencing spatial and temporal patterns of Lanius ludovicianus (Loggerhead Shrike) occupancy at a grassland-sagebrush ecotone

Lanius ludovicianus (Loggerhead Shrike) is a predatory songbird that has experienced a severe population decline throughout its range since the 1940s, likely driven by a combination of factors, including habitat loss and fragmentation. Occupying larger territories compared to many other passerines, L. ludovicianus requires open habitat with interspersed trees and shrubs for nesting and...
Authors
Holly M. Todaro, Scott R. Loss, Robert Charles Lonsinger, Courtney J. Duchardt

Predicting aquatic habitat connectivity across watershed boundaries: Implications for interbasin spread of nonindigenous aquatic species. Predicting aquatic habitat connectivity across watershed boundaries: Implications for interbasin spread of nonindigenous aquatic species.

Understanding habitat connectivity is critical for managing nonindigenous aquatic species (NAS) spread. Dams and watershed boundaries can be impassable to NAS during typical conditions but may become temporarily passable during flooding. The goal of our project was to develop an approach for identifying locations of aquatic connectivity at a fine spatial scale along watershed boundaries...
Authors
Peter J. Pfaff, Alison A. Coulter, Benjamin J. Schall, Tanner Davis, Steven R. Chipps, David P. Coulter

Catchment prioritization for freshwater mussel conservation in the Northeastern United States based on distribution modelling Catchment prioritization for freshwater mussel conservation in the Northeastern United States based on distribution modelling

Freshwater mussels are critical to the health of freshwater systems, but their populations are declining dramatically throughout the world. The limited resources available for freshwater mussel conservation necessitates the geographic prioritization of conservation-related actions. However, lack of knowledge about freshwater mussel spatial distributions hinders decision making in this...
Authors
Rebecca S.M. O’Brien, Graziella Vittoria DiRenzo, Allison H. Roy, Jason Carmignani, Rebecca M. Quinones, Jennifer B. Rogers, Beth I. Swartz

Non-lethal detection of Renibacterium salmoninarum in Greenback Cutthroat Trout Oncorhynchus clarkii stomias comparing mucus, blood, and ovarian fluid samples to kidney tissues Non-lethal detection of Renibacterium salmoninarum in Greenback Cutthroat Trout Oncorhynchus clarkii stomias comparing mucus, blood, and ovarian fluid samples to kidney tissues

Objective Renibacterium salmoninarum, the causative agent of bacterial kidney disease, poses a major threat to both wild and aquaculture salmonid populations. Traditional detection methods typically involve lethal sampling to collect kidney tissues but are often impractical for species of conservation concern. This study evaluates nonlethal sampling techniques for detecting R...
Authors
Firestone B.R. Tawni, Eric R. Fetherman, Dana L. Winkelman

Seasonal synchronicity and multi-decadal stability of headwater biogeochemistry in the northern temperate zone Seasonal synchronicity and multi-decadal stability of headwater biogeochemistry in the northern temperate zone

Temporal patterns in chemistry of headwater streams reflect responses of water and elemental cycles to perturbations occurring at local to global scales. We evaluated multi-scale temporal patterns in up to 32 y of monthly observations of stream chemistry (ammonium, calcium, dissolved organic carbon, nitrate, total dissolved phosphorus, and sulfate) in 22 reference catchments within the...
Authors
Tamara K. Harms, Jim Hood, Mark David Scheuerell, Irena F. Creed, John L. Campbell, I. J. Fernandez, S. N. Higgins, Sherri L. Johnson, James B. Shanley, Stephen Sebestyen, K. L. Webster, H. Yoa

Simple bagged movement models for telemetry data Simple bagged movement models for telemetry data

Determining which statistical methods are appropriate for data is both user and data dependent and prone to change as new methodology becomes available. This process encompasses model ideation, model selection, and determining appropriate use of statistical methods. Literature on models for animal movement emerging in the past two decades has yielded a rich collection of statistical...
Authors
Andrew B. Whetten, Trevor J. Hefley, David A. Haukos, Dustin E. Brewer

Chinook salmon Oncorhynchus tshawytscha (Walbaum, 1792) life history influences how diagnostic cranial structures relate to fish length Chinook salmon Oncorhynchus tshawytscha (Walbaum, 1792) life history influences how diagnostic cranial structures relate to fish length

Diagnostic bones can aid in identification and size determination of fishes from ingested prey, archaeological remains or damaged specimens. We extracted diagnostic structures, including cleithra, dentaries, opercles and otoliths, from juvenile spring Chinook salmon (Oncorhynchus tshawytscha) from three distinct groups: hatchery, naturally produced and surrogate, representing shared...
Authors
Jeremy D. Romer, Kevin A. Stertz, Keiara Pham, Christina Amy Murphy

Invasive predatory fish occupies highest trophic position leading to expansion of isotopic niches in a riverine food web Invasive predatory fish occupies highest trophic position leading to expansion of isotopic niches in a riverine food web

Invasive species are drivers of ecological change with the potential to reshape the structure and function of terrestrial and aquatic ecosystems. The invasive flathead catfish (Pylodictis olivaris) is an opportunistic predator that has established a rapidly growing population in the Susquehanna River, Pennsylvania, USA, since they were first detected in 2002. Although the predatory...
Authors
Olivia C. Hodgson, Sydney Stark, Megan K. Schall, Geoffrey D. Smith, Kelly L. Smalling, Tyler Wagner
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