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Publications

Browse publications authored by our scientists.  Publications available are: USGS-authored journal articles, series reports, book chapters, other government publications, and more. 

 

**Disclaimer: The views expressed in Non-USGS publications are those of the author and do not represent the views of the USGS, Department of the Interior, or the U.S. Government.

Filter Total Items: 5125

Wind-energy development alters pronghorn migration at multiple scales Wind-energy development alters pronghorn migration at multiple scales

Migration is a critical behavioral strategy necessary for population persistence and ecosystem functioning, but migration routes have been increasingly disrupted by anthropogenic activities, including energy development. Wind energy is the world's fastest growing source of electricity and represents an important alternative to hydrocarbon extraction, but its effects on migratory species...
Authors
Megan C. Milligan, Aaron N. Johnston, Jeffery L. Beck, Kaitlyn L. Taylor, Embere Hall, Lee Knox, Teal Cufaude, Cody F. Wallace, Geneva W. Chong, Matthew J. Kauffman

Territories within groups: The dynamic competition of drift-feeding juvenile Chinook salmon in 3-dimensional space Territories within groups: The dynamic competition of drift-feeding juvenile Chinook salmon in 3-dimensional space

Salmonid populations are often regulated by territorial competition among juveniles for food and space. In the canonical view, salmonid territories are spaced horizontally across the river bottom in a 2-D mosaic. However, some juveniles instead feed in tight, three-dimensional (3-D) social groups. To investigate whether territoriality is possible within such groups, we applied a new...
Authors
Jason R. Neuswanger, Amanda E. Rosenberger, M. S. Wipfli, Nicholas F. Hughes

A comprehensive multi-state conditional occupancy model for evaluating interactions of non-native and native species A comprehensive multi-state conditional occupancy model for evaluating interactions of non-native and native species

A major challenge in ecology is disentangling interactions of non-native, potentially invasive species on native species. Conditional two-species occupancy models examine the effects of dominant species (e.g., non-native) on subordinate species (e.g., native) while considering the possibility that occupancy of one species may affect occupancy and/ or detection of the other. Although...
Authors
Patti J. Wohner, Paul D. Scheerer, Michael H. Meeuwig, James T. Peterson

Multi-scale effects of land cover, weather, and fire on Columbian sharp-tailed grouse Multi-scale effects of land cover, weather, and fire on Columbian sharp-tailed grouse

Columbian sharp-tailed grouse (Tympanuchus phasianellus columbianus) are endemic to grassland and shrub-steppe ecosystems of western North America, yet their distribution has contracted to
Authors
Bryan S. Stevens, Courtney J. Conway, Jeffrey M. Knetter, Shane B. Roberts, Patrick Donnelly

Aerial application of organic pellets eliminates Lake Trout recruitment from a primary spawning reef in Yellowstone Lake Aerial application of organic pellets eliminates Lake Trout recruitment from a primary spawning reef in Yellowstone Lake

Invasive Lake Trout Salvelinus namaycush in the Yellowstone Lake ecosystem have been gillnetted since 1995 to suppress the population and allow for recovery of native Yellowstone Cutthroat Trout Oncorhynchus clarkii bouvieri. Although gillnetting is effective (Lake Trout population growth rate λ ≤ 0.6 during 2012–2022), the effort only targets free-swimming, age-2 and older Lake Trout...
Authors
Todd M. Koel, Philip D. Doepke, Drew J. MacDonald, Nathan A. Thomas, Cody W. Vender, Hayley C. Glassic, Alex S. Poole, Christopher S. Guy, Alexander V. Zale

Differential shortstopping behaviour in Whooping Cranes: Habitat or social learning? Differential shortstopping behaviour in Whooping Cranes: Habitat or social learning?

Many migratory bird species have begun shifting their wintering grounds closer to their breeding grounds, shortening their yearly migration distance through a behavior called shortstopping. While multiple studies have investigated possible drivers, it remains unclear why only some populations adopt this behavior. We studied the differential occurrence of shortstopping in two populations...
Authors
Philipp Mendgen, Sarah J. Converse, Aaron T. Pearse, Claire S. Teitelbaum, Thomas Mueller

Modeling coho salmon (Oncorhynchus kisutch) population response to streamflow and water temperature extremes Modeling coho salmon (Oncorhynchus kisutch) population response to streamflow and water temperature extremes

Models that assess the vulnerability of freshwater species to shifting environmental conditions do not always account for short-duration extremes, which are increasingly common. Life cycle models for Pacific salmon (Oncorhynchus spp.) generally focus on average conditions that fish experience during each life stage, yet many floods, low flows, and elevated water temperatures only last...
Authors
J. Ryan Bellmore, Christopher J. Sergeant, Rebecca A. Bellmore, Jeffrey A. Falke, Jason B. Fellman

Vertical transmission of Renibacterium salmoninarum in cutthroat trout (Oncorhynchus clarkii) Vertical transmission of Renibacterium salmoninarum in cutthroat trout (Oncorhynchus clarkii)

Vertical transmission of Renibacterium salmoninarum has been well-documented in anadromous salmonids but not in hatchery-reared inland trout. We assessed whether the bacterium is vertically transmitted in cutthroat trout (Oncorhynchus clarkii) from a Colorado, USA hatchery, and assessed the rate of transmission from male and female brood fish. Adult brood fish were killed, tested for R
Authors
Tawni B. Riepe, Eric R. Fetherman, Brad Neuschwanger, Tracy Davis, Andrew Perkins, Dana L. Winkelman

Vertical transmission of Renibacterium salmoninarum in cutthroat trout (Oncorhynchus clarkii) Vertical transmission of Renibacterium salmoninarum in cutthroat trout (Oncorhynchus clarkii)

Vertical transmission of Renibacterium salmoninarum has been well-documented in anadromous salmonids but not in hatchery-reared inland trout. We assessed whether the bacterium is vertically transmitted in cutthroat trout (Oncorhynchus clarkii) from a Colorado, USA hatchery, and assessed the rate of transmission from male and female brood fish. Adult brood fish were killed, tested for R
Authors
Tawni B. Riepe, Eric R. Fetherman, Brad Neuschwanger, Tracy Davis, Andrew Perkins, Dana L. Winkelman

Natal contributions of Kokanee salmon to Flaming Gorge Reservoir, Wyoming–Utah: An evaluation using otolith microchemistry Natal contributions of Kokanee salmon to Flaming Gorge Reservoir, Wyoming–Utah: An evaluation using otolith microchemistry

In a system that uses supplemental stocking to enhance a fishery that serves a dual purpose, an understanding of the contributions from natural and hatchery-produced fish is important so that hatchery resources can be appropriately allocated. Kokanee Oncorhynchus nerka were first stocked in Flaming Gorge Reservoir (FGR), Wyoming–Utah, in 1963 and serve a dual purpose as a prey resource...
Authors
Aaron Black, John D. Walrath, Marte Willmes, Michael C. Quist

Delayed incubation leads to hatching failure of a Burrowing Owl (Athene cunicularia) nest Delayed incubation leads to hatching failure of a Burrowing Owl (Athene cunicularia) nest

Birds face strong selective pressures to complete individual nesting attempts as quickly as possible to minimize exposure of nests to predators and weather, maximize renesting potential, and maximize hatching success. As a result, the duration of developmental periods and of overall nest periods are often relatively constant within species. However, birds may sometimes be subject to...
Authors
Carl G. Lundblad, Courtney J. Conway

Gene flow influences the genomic architecture of local adaptation in six riverine fish species Gene flow influences the genomic architecture of local adaptation in six riverine fish species

Understanding how gene flow influences adaptive divergence is important for predicting adaptive responses. Theoretical studies suggest that when gene flow is high, clustering of adaptive genes in fewer genomic regions would protect adaptive alleles from recombination and thus be selected for, but few studies have tested it with empirical data. Here, we used restriction site-associated...
Authors
Yue Shi, Kristen L. Bouska, Garrett J. McKinney, William Dokai, Andrew Bartels, Megan V. McPhee, Wesley Larson
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