Publications
Publications from USGS science centers throughout the Southeast Region.
Filter Total Items: 10379
A Bayesian approach to predict sub-annual beach change and recovery A Bayesian approach to predict sub-annual beach change and recovery
The upper beach, between the astronomical high tide and the dune-toe, supports habitat and recreation along many beaches, making predictions of upper beach change valuable to coastal managers and the public. We developed and tested a Bayesian network (BN) to predict the cross-shore position of an upper beach elevation contour (ZlD) following 1 month to 1-year intervals at Fire Island...
Authors
Kathleen Wilson, Erika E. Lentz, Jennifer L. Miselis, Ilgar Safak, Owen T. Brenner
Floristic quality index and forested floristic quality index: Assessment tools for restoration projects and monitoring sites in coastal Louisiana Floristic quality index and forested floristic quality index: Assessment tools for restoration projects and monitoring sites in coastal Louisiana
The Floristic Quality Index (FQI) has been used in many areas throughout the United State to assess the integrity of plant communities and restoration projects. Here, we summarize two tools that have been developed for monitoring sites in coastal Louisiana wetlands. The FQI was modified for herbaceous data collected in coastal Louisiana monitoring sites. A second FQI, the Forested...
Authors
Kari Cretini, William B. Wood, Jenneke M. Visser, Ken W. Krauss, Leigh Anne Sharp, Gregory D. Steyer, Gary P. Shaffer, Sarai Piazza
Spatial and temporal variability of pCO2, carbon fluxes and saturation state on the West Florida Shelf Spatial and temporal variability of pCO2, carbon fluxes and saturation state on the West Florida Shelf
The West Florida Shelf (WFS) is a source of uncertainty for the Gulf of Mexico carbon budget. Data from the synthesis of approximately 135,000 pCO2 values from over 96 cruises from the WFS show that the shelf waters fluctuate between being a weak source to a weak sink of carbon with the atmosphere. Overall, the shelf acts as a weak source of CO2 at 0.32 ± 1.5 mol m-2 yr-1. Subregions...
Authors
L. Robbins, K. Daley, L. Barbero, R. Wanninkhof, R.L. Heathcote, H. Zong, John T. Lisle, W.-J. Cai, C. Smith
Comparison of microbiomes of cold-water corals Primnoa pacifica and Primnoa resedaeformis, with possible link between microbiome composition and host genotype Comparison of microbiomes of cold-water corals Primnoa pacifica and Primnoa resedaeformis, with possible link between microbiome composition and host genotype
Cold-water corals provide critical habitats for a multitude of marine species, but are understudied relative to tropical corals. Primnoa pacifica is a cold-water coral prevalent throughout Alaskan waters, while another species in the genus, Primnoa resedaeformis, is widely distributed in the Atlantic Ocean. This study examined the V4-V5 region of the 16S rRNA gene after amplifying and
Authors
Dawn B. Goldsmith, Christina A. Kellogg, Cheryl L. Morrison, Michael A. Gray, Robert P. Stone, Rhian G. Waller, Sandra D. Brooke, Steve W. Ross
Evaluating long-term patterns of decreasing groundwater discharge through a lake-bottom permeable reactive barrier Evaluating long-term patterns of decreasing groundwater discharge through a lake-bottom permeable reactive barrier
Identifying and quantifying groundwater exchange is critical when considering contaminant fate and transport at the groundwater/surface-water interface. In this paper, areally distributed temperature and point seepage measurements are used to efficiently assess spatial and temporal groundwater discharge patterns through a glacial-kettle lakebed area containing a zero-valent iron...
Authors
Timothy D. McCobb, Martin A. Briggs, Denis R. LeBlanc, Frederick D. Day-Lewis, Carole D. Johnson
Status of groundwater-level altitudes and long-term groundwater-level changes in the Chicot, Evangeline, and Jasper aquifers, Houston-Galveston region, Texas, 2018 Status of groundwater-level altitudes and long-term groundwater-level changes in the Chicot, Evangeline, and Jasper aquifers, Houston-Galveston region, Texas, 2018
Since the early 1900s, most of the groundwater withdrawals in the Houston-Galveston region, Texas, have been from the three primary aquifers that compose the Gulf Coast aquifer system—the Chicot, Evangeline, and Jasper aquifers. Withdrawals from these aquifers are used for municipal supply, industrial, and irrigation purposes. This report, prepared by the U.S. Geological Survey in...
Authors
Sachin D. Shah, Jason K. Ramage, Christopher L. Braun
Moving from generalisations to specificity about mangrove-saltmarsh dynamics Moving from generalisations to specificity about mangrove-saltmarsh dynamics
Spatial and temporal variability in factors influencing mangrove establishment and survival affects the distribution of mangrove, particularly near their latitudinal limit, where mangrove expansion into saltmarsh is conspicuous. In this paper the spatial variability in mangrove distribution and variability in factors influencing mangrove establishment and survival during the Quaternary...
Authors
Kerrylee Rogers, Ken W. Krauss
Airborne bacteria in Earth’s lower stratosphere resemble taxa detected in the troposphere: results from a new NASA aircraft bioaerosol collector (ABC) Airborne bacteria in Earth’s lower stratosphere resemble taxa detected in the troposphere: results from a new NASA aircraft bioaerosol collector (ABC)
Airborne microorganisms in the upper troposphere and lower stratosphere remain elusive due to a lack of reliable sample collection systems. To address this problem, we designed, installed, and flight-validated a novel Aircraft Bioaerosol Collector (ABC) for NASA's C-20A that can make collections for microbiological research investigations up to altitudes of 13.7 km. Herein we report...
Authors
David J. Smith, Jayamary D. Ravichandar, Sunit Jain, Dale W. Griffin, Hongbin Yu, Qian Tan, James Thissen, Terry Lusby, Patrick Nicoll, Sarah Shedler, P. Martinez, Alejandro Osorio, Jason Lechniak, Samuel Choi, Kayleen Sabino, Kathryn Iverson, Luisa Chan, Crystal Jaing, John McGrath
Macrobenthic infaunal communities associated with deep‐sea hydrocarbon seeps in the northern Gulf of Mexico Macrobenthic infaunal communities associated with deep‐sea hydrocarbon seeps in the northern Gulf of Mexico
There are thousands of seeps in the deep ocean worldwide; however, many questions remain about their contributions to global biodiversity and the surrounding deep‐sea environment. In addition to being globally distributed, seeps provide several benefits to humans such as unique habitats, organisms with novel genes, and carbon regulation. The purpose of this study is to determine whether...
Authors
Travis W. Washburn, Amanda W.J. Demopoulos, Paul A. Montagna
Assessment of water resources in areas that affect the habitat of the endangered Hine’s emerald dragonfly in the Lower Des Plaines River Valley, Illinois Assessment of water resources in areas that affect the habitat of the endangered Hine’s emerald dragonfly in the Lower Des Plaines River Valley, Illinois
Review of previous investigations indicates that potential decreases in groundwater recharge and increased groundwater extraction in the vicinity of the Lower Des Plaines River Valley in Will County, Illinois, may reduce the amount of groundwater flow in the Silurian aquifer in this area. Groundwater discharge from the Silurian aquifer to wetlands in the Lower Des Plaines River Valley...
Authors
Robert T. Kay, Amy M. Gahala, Clinton Bailey
A novel technique for isolating DNA from Tempus™ blood RNA tubes after RNA isolation A novel technique for isolating DNA from Tempus™ blood RNA tubes after RNA isolation
Objective We use Tempus blood RNA tubes (Applied Biosystems) during health assessments of American moose (Alces alces spp.) as a minimally invasive means to obtain RNA. Here we describe a novel protocol to additionally isolate high-quality DNA from the supernatant remaining after the RNA isolation methodology. Metrics used to qualify DNA quality included measuring the concentration...
Authors
Jason A. Ferrante, Michelle R. Giles, Emily Benzie, Margaret Hunter
The confluences of ideas leading to, and the flow of ideas emerging from, individual-based modeling of riverine fishes The confluences of ideas leading to, and the flow of ideas emerging from, individual-based modeling of riverine fishes
In this review article, we trace the history of events leading to the development of individual-based models (IBMs) to represent aquatic organisms in rivers and streams. As a metaphor, we present this history as a series of confluences between individual scientists (tributaries) sharing ideas. We describe contributions of these models to science and management. One iconic feature of...
Authors
Henriette I. Jager, Donald L. DeAngelis