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Publications

Publications from USGS science centers throughout the Southeast Region.

Filter Total Items: 10379

State-space models to infer movements and behavior of fish detected in a spatial array of acoustic receivers State-space models to infer movements and behavior of fish detected in a spatial array of acoustic receivers

We developed state-space models for inferring movements and behaviors of fish implanted with acoustic transmitters and detected within a spatial array of stationary acoustic receivers. In these models fish movements and behavior switching are specified using a hidden Markov model of the changes in an individual's latent activity center. The observed number of detections at each acoustic...
Authors
Melissa E. Price, Robert Dorazio

Analysis of the impact of African dust storms on the presence of enteric viruses in the atmosphere in Tenerife, Spain Analysis of the impact of African dust storms on the presence of enteric viruses in the atmosphere in Tenerife, Spain

Airborne viruses and their relation to dust storms, as a possible route for dispersion, have not been widely investigated. There are, however, studies that have described the airborne dispersal of pathogenic viruses and their potential impact on public and agronomical health. Atmospheric samples were collected in an urban area of Tenerife during 2009, 2010, 2012 and 2013 and screened for...
Authors
Cristina Gonzalez-Martin, Nieves Coronado-Alvarez, Nuria Teigell-Perez, Raquel Diaz-Solano, Francisco Exposito, Juan Diaz, Dale W. Griffin, Basilio Valladares

Organochlorine chemical residues in Northern Cardinal (Cardinalis cardinalis) eggs from Greater Washington, DC USA Organochlorine chemical residues in Northern Cardinal (Cardinalis cardinalis) eggs from Greater Washington, DC USA

Northern Cardinal eggs from six neighborhoods near Washington DC were analyzed for organochlorine pesticides and PCBs. All compounds were detected more frequently and at higher concentrations in more heavily urbanized neighborhoods. DDT (mostly as p,pʹ-DDE) was detected in all neighborhoods. p,pʹ-DDT was typically 0.5‒16 ng/g (ww) in most suburban neighborhoods but was not detected (
Authors
Christopher J. Schmitt, Kathy R. Echols, Paul Peterman, Carl Orazio, Christiana Grimm, Shirlee Tan, Nora E. Diggs, Peter P. Marra

Isotope niche dimension and trophic overlap between bigheaded carps and native filter-feeding fish in the lower Missouri River, USA Isotope niche dimension and trophic overlap between bigheaded carps and native filter-feeding fish in the lower Missouri River, USA

Stable carbon and nitrogen isotope values (δ13C and δ15N) were used to evaluate trophic niche overlap between two filter-feeding fishes (known together as bigheaded carp) native to China, silver carp (Hypophthalmichthys molitrix) and bighead carp (Hypophthalmichthys nobilis), and three native filter-feeding fish including bigmouth buffalo (Ictiobus cyprinellus), gizzard shad (Dorosoma...
Authors
Jianzhu Wang, Duane Chapman, Jun Xu, Yang Wang, Binhe Gu

Acute toxicity of sodium chloride and potassium chloride to a unionid mussel (Lampsilis siliquoidea) in water exposures Acute toxicity of sodium chloride and potassium chloride to a unionid mussel (Lampsilis siliquoidea) in water exposures

Freshwater mussels (order Unionoida) are one of the most imperiled groups of animals in the world. However, many ambient water quality criteria and other environmental guideline values do not include data for freshwater mussels, in part because mussel toxicity test methods are comparatively new and data may not have been available when criteria and guidelines were derived. The objectives...
Authors
Ning Wang, Chris D. Ivey, Rebecca A. Dorman, Christopher G. Ingersoll, Jeffery A. Steevens, Edward J. Hammer, Candice R. Bauer, David R. Mount

A framework for identifying and characterising coral reef “oases” against a backdrop of degradation A framework for identifying and characterising coral reef “oases” against a backdrop of degradation

Human activities have led to widespread ecological decline; however, the severity of degradation is spatially heterogeneous due to some locations resisting, escaping, or rebounding from disturbances.We developed a framework for identifying oases within coral reef regions using long‐term monitoring data. We calculated standardised estimates of coral cover (z‐scores) to distinguish sites...
Authors
James R. Guest, Peter J. Edmunds, Ruth D. Gates, Ilsa B. Kuffner, Andreas J Andersson, Brian B. Barnes, Iliana Chollett, Travis A. Courtney, Robin Elahi, Kevin Gross, Elizabeth A. Lenz, Satoshi Mitarai, Peter J. Mumby, Hannah R. Nelson, Britt A. Parker, Hollie M. Putnam, Caroline S. Rogers, Lauren T. Toth

Book review: A new view on the species abundance distribution Stochastic communities: A mathematical theory of biodiversity Book review: A new view on the species abundance distribution Stochastic communities: A mathematical theory of biodiversity

The sampled relative abundances of species of a taxonomic group, whether birds, trees, or moths, in a natural community at a particular place vary in a way that suggests a consistent underlying pattern, referred to as the species abundance distribution (SAD). Preston [1] conjectured that the numbers of species, plotted as a histogram of logarithmic abundance classes called octaves...
Authors
Donald L. DeAngelis

Estimating lag to peak between rainfall and peak streamflow with a mixed-effects model Estimating lag to peak between rainfall and peak streamflow with a mixed-effects model

We test the use of a mixed-effects model for estimating lag to peak for small basins in Maine (drainage areas from 0.8 to 78 km2). Lag to peak is defined as the time between the center of volume of the excess rainfall during a storm event and the resulting peak streamflow. A mixed-effects model allows for multiple observations at sites without violating model assumptions inherent in...
Authors
Pamela J. Lombard, David Holtschlag

Suspended-sediment concentrations and loads in the lower Mississippi and Atchafalaya rivers decreased by half between 1980 and 2015 Suspended-sediment concentrations and loads in the lower Mississippi and Atchafalaya rivers decreased by half between 1980 and 2015

The Weighted Regressions on Time, Discharge, and Season (WRTDS) model was used to derive estimates of suspended-sediment concentration (SSC) and suspended-sediment load (SSL), their dependence on discharge, and their trends with confidence intervals, for one site each on the lowermost Mississippi and Atchafalaya Rivers. The WRTDS model reduces uncertainty in SSCs related to variable...
Authors
Scott Mize, Jennifer C. Murphy, Timothy H. Diehl, Dennis K. Demcheck

Variation in home range size and patterns in adult female American crocodiles Crocodylus acutus Variation in home range size and patterns in adult female American crocodiles Crocodylus acutus

The American crocodile Crocodylus acutus is a threatened species that uses relatively deep, open-water habitats with low salinity. Adult female American crocodiles nest on sandy coastal beaches, islands or human-made berms, assist in the hatching process, and can travel long distances to nesting habitat. We satellite-tracked 15 adult female American crocodiles in 2 hydrologically...
Authors
Kristen M. Hart, Jeffrey S. Beauchamp, Michael S. Cherkiss, Frank Mazzotti

Sea-level rise could overwhelm coral reefs Sea-level rise could overwhelm coral reefs

An assessment of the capacity of coral reefs to grow fast enough to keep up with projected rises in sea level finds that most reefs will fall behind if nothing is done to restore them.
Authors
Ilsa B. Kuffner

Hydrographic surveys of rivers and lakes using a multibeam echosounder mapping system Hydrographic surveys of rivers and lakes using a multibeam echosounder mapping system

A multibeam echosounder is a type of sound navigation and ranging device that uses sound waves to “see” through even murky waters. Unlike a single beam echosounder (also known as a depth sounder or fathometer) that releases a single sound pulse in a single, narrow beam and “listens” for the return echo, a multibeam system emits a multidirectional radial beam to obtain information within...
Authors
Richard J. Huizinga, David C. Heimann
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