Publications
Publications from USGS science centers throughout the Southeast Region.
Filter Total Items: 10380
Modeling the compensatory response of an invasive tree to specialist insect herbivory Modeling the compensatory response of an invasive tree to specialist insect herbivory
The severity of the effects of herbivory on plant fitness can be moderated by the ability of plants to compensate for biomass loss. Compensation is an important component of the ecological fitness in many plants, and has been shown to reduce the effects of pests on agricultural plant yields. It can also reduce the effectiveness of biocontrol through introduced herbivores in controlling...
Authors
Bo Zhang, Xin Liu, Donald L. DeAngelis, Lu Zhai, Min B. Rayamajhi, Shu Ju
eDNAoccupancy: An R package for multi-scale occupancy modeling of environmental DNA data eDNAoccupancy: An R package for multi-scale occupancy modeling of environmental DNA data
In this article we describe eDNAoccupancy, an R package for fitting Bayesian, multi-scale occupancy models. These models are appropriate for occupancy surveys that include three, nested levels of sampling: primary sample units within a study area, secondary sample units collected from each primary unit, and replicates of each secondary sample unit. This design is commonly used in...
Authors
Robert Dorazio, Richard A. Erickson
Development of a dual luciferase activity and fluorescamine protein assay adapted to a 384 micro-well plate format: Reducing variability in human luciferase transactivation cell lines aimed at endocrine active substances Development of a dual luciferase activity and fluorescamine protein assay adapted to a 384 micro-well plate format: Reducing variability in human luciferase transactivation cell lines aimed at endocrine active substances
There is a need to adapt cell bioassays to 384-well and 1536-well formats instead of the traditional 96-well format as high-throughput screening (HTS) demands increase. However, the sensitivity and performance of the bioassay must be re-verified in these higher micro-well plates, and verification of cell health must also be HT (high-throughput). We have adapted two commonly used human...
Authors
Jennifer Brennan, Donald E. Tillitt
Mangrove ecosystems under climate change Mangrove ecosystems under climate change
This chapter assesses the response of mangrove ecosystems to possible outcomes of climate change, with regard to the following categories: (i) distribution, diversity, and community composition, (ii) physiology of flora and fauna, (iii) water budget, (iv) productivity and remineralization, (v) carbon storage in biomass and sediments, and (vi) the filter function for elements beneficial...
Authors
T.C. Jennerjahn, E. Gilman, Ken W. Krauss, L.D. Lacerda, I. Nordhaus, E. Wolanski
Streamflow characteristics from modelled runoff time series: Importance of calibration criteria selection Streamflow characteristics from modelled runoff time series: Importance of calibration criteria selection
Ecologically relevant streamflow characteristics (SFCs) of ungauged catchments are often estimated from simulated runoff of hydrologic models that were originally calibrated on gauged catchments. However, SFC estimates of the gauged donor catchments and subsequently the ungauged catchments can be substantially uncertain when models are calibrated using traditional approaches based on...
Authors
Sandra Poole, Marc Vis, Rodney Knight, Jan Seibert
Predicting landscape effects of Mississippi River diversions on soil organic carbon sequestration Predicting landscape effects of Mississippi River diversions on soil organic carbon sequestration
Large Mississippi River (MR) diversions (peak water flow >1416 m3/s and sediment loads >165 kg/s) have been proposed as part of a suite of coastal restoration projects and are expected to rehabilitate and rebuild wetlands to alleviate the significant historic wetland loss in coastal Louisiana. These coastal wetlands are undergoing increasing eustatic sea‐level rise, land subsidence...
Authors
Hongqing Wang, Gregory D. Steyer, Brady Couvillion, Holly J. Beck, John M Rybczyk, Victor H. Rivera-Monroy, Ken W. Krauss, Jenneke M. Visser
Monitoring storm tide and flooding from Hurricane Matthew along the Atlantic coast of the United States, October 2016 Monitoring storm tide and flooding from Hurricane Matthew along the Atlantic coast of the United States, October 2016
Introduction Hurricane Matthew moved adjacent to the coasts of Florida, Georgia, South Carolina, and North Carolina. The hurricane made landfall once near McClellanville, South Carolina, on October 8, 2016, as a Category 1 hurricane on the Saffir-Simpson Hurricane Wind Scale. The U.S. Geological Survey (USGS) deployed a temporary monitoring network of storm-tide sensors at 284 sites...
Authors
Eric R. Frantz, Michael J. Byrne, Andral W. Caldwell, Stephen L. Harden
Restoration of contaminated ecosystems: adaptive management in a changing climate Restoration of contaminated ecosystems: adaptive management in a changing climate
Three case studies illustrate how adaptive management (AM) has been used in ecological restorations that involve contaminants. Contaminants addressed include mercury, selenium, and contaminants and physical disturbances delivered to streams by urban stormwater runoff. All three cases emphasize the importance of broad stakeholder input early and consistently throughout decision analysis...
Authors
Aida Farag, Diane L. Larson, Jenny Stauber, Ralph Stahl, John Isanhart, Kevin T. McAbee, Christopher J. Walsh
Concepts: Assessing tiger population dynamics using capture–recapture sampling Concepts: Assessing tiger population dynamics using capture–recapture sampling
Capture-recapture can be viewed as an animal survey method in which the count statistic is the total number of animals caught, and the associated detection probability is the probability of capture.
Authors
J. Andrew Royle, Arjun M. Gopalaswamy, Robert Dorazio, James D. Nichols, Devcharan Jathanna, Ravishankar Parameshwaran
Identity, reproductive potential, distribution, ecology and management of invasive Pomacea maculata in the southern United States Identity, reproductive potential, distribution, ecology and management of invasive Pomacea maculata in the southern United States
Established populations of introduced Pomacea maculata, a highly fecund, large species of apple snail native to South America, now occur throughout southeast Asia, in Spain and extensively across the southern United States. Substantial research on nonnative apple snails takes place in Southeast Asia and has frequently identified apple snails as P. canaliculata. That these Asian...
Authors
Romi L. Burks, Jennifer Bernatis, James E. Byers, Jacoby Carter, Charles M. Martin, William G. McDowell, Jess Van Dyke
Tree sampling as a method to assess vapor intrusion potential at a site characterized by VOC-contaminated groundwater and soil Tree sampling as a method to assess vapor intrusion potential at a site characterized by VOC-contaminated groundwater and soil
Vapor intrusion (VI) by volatile organic compounds (VOCs) in the built environment presents a threat to human health. Traditional VI assessments are often time-, cost-, and labor-intensive; whereas traditional subsurface methods sample a relatively small volume in the subsurface and are difficult to collect within and near structures. Trees could provide a similar subsurface sample where...
Authors
Jordan L. Wilson, Matthew A. Limmer, V.A. Samaranayake, John G. Schumacher, Joel G. Burken
Climate and land-use change in wetlands: A dedication Climate and land-use change in wetlands: A dedication
Future climate and land-use change may wreak havoc on wetlands, with the potential to erode their values as harbors for biota and providers of human services. Wetlands are important to protect, particularly because these provide a variety of ecosystem services including wildlife habitat, water purification, flood storage, and storm protection (Mitsch, Bernal, and Hernandez 2015). Without...
Authors
Beth A. Middleton