Neil Kamal Ganju, PhD
My research spans the multiple disciplines that converge in estuarine systems. Research projects include numerical model development, field observations of hydrodynamics and water quality, wetland and coastal vulnerability assessments, geomorphic change, and eutrophication.
In 2001, I began working for the USGS at the California Water Science Center, on the San Francisco Bay Sediment Transport Project with Dr. David Schoellhamer. In 2008 I moved to the Woods Hole Coastal and Marine Science Center and began multiple projects throughout the northeast US. The Estuarine Processes, Hazards, and Ecosystems project, started in 2015, details the past and ongoing studies we are involved with.
Professional Experience
2010-present: Research Oceanographer, Woods Hole Coastal and Marine Science Center
2008-2010: Hydraulic Engineer, Woods Hole Coastal and Marine Science Center
2001-2008: Hydraulic Engineer, California Water Science Center
Education and Certifications
I studied civil engineering at the University of Michigan (BSCE), the University of Florida (MSCE), and the University of California-Davis (Ph.D.).
Science and Products
Filter Total Items: 19
Filter Total Items: 76
Elevation of marsh units in Assateague Island National Seashore and Chincoteague Bay, Maryland and Virginia Elevation of marsh units in Assateague Island National Seashore and Chincoteague Bay, Maryland and Virginia
Elevation distribution in the Assateague Island National Seashore (ASIS) salt marsh complex and Chincoteague Bay is given in terms of mean elevation of conceptual marsh units defined by Defne and Ganju (2018). The elevation data is based on the 1-meter resolution Coastal National Elevation Database (CoNED). Through scientific efforts initiated with the Hurricane Sandy Science Plan, the U...
Mean tidal range in marsh units of Plum Island Estuary and Parker River salt marsh complex, Massachusetts Mean tidal range in marsh units of Plum Island Estuary and Parker River salt marsh complex, Massachusetts
Biomass production is positively correlated with mean tidal range in salt marshes along the Atlantic coast of the United States of America. Recent studies support the idea that enhanced stability of the marshes can be attributed to increased vegetative growth due to increased tidal range. This dataset displays the spatial variation of mean tidal range (i.e. Mean Range of Tides, MN) in...
Elevation of marsh units in Plum Island Estuary and Parker River salt marsh complex, Massachusetts Elevation of marsh units in Plum Island Estuary and Parker River salt marsh complex, Massachusetts
This data release provides elevation distribution in the Plum Island Estuary and Parker River (PIEPR) salt marsh complex. Elevation distribution was calculated in terms of mean elevation of conceptual marsh units defined by Defne and Ganju (2018). The elevation data was based on the 1-meter gridded Digital Elevation Model and supplemented by 1-meter resampled 1/9 arc-second resolution...
Unvegetated to vegetated marsh ratio in Plum Island Estuary and Parker River salt marsh complex, Massachusetts Unvegetated to vegetated marsh ratio in Plum Island Estuary and Parker River salt marsh complex, Massachusetts
Unvegetated to vegetated marsh ratio (UVVR) in the Plum Island Estuary and Parker River (PIEPR) salt marsh complex was computed based on conceptual marsh units defined by Defne and Ganju (2018). UVVR was calculated based on U.S. Department of Agriculture National Agriculture Imagery Program (NAIP) 1-meter resolution imagery. Through scientific efforts initiated with the Hurricane Sandy...
Conceptual marsh units for Plum Island Estuary and Parker River salt marsh complex, Massachusetts Conceptual marsh units for Plum Island Estuary and Parker River salt marsh complex, Massachusetts
The salt marsh complex of Plum Island Estuary and Parker River (PIEPR) was delineated to smaller, conceptual marsh units by geoprocessing of surface elevation data. Flow accumulation based on the relative elevation of each location was used to determine the ridge lines that separate each marsh unit while the surface slope was used to automatically assign each unit a drainage point, where...
Elevation of salt marsh units in Edwin B. Forsythe National Wildlife Refuge, New Jersey Elevation of salt marsh units in Edwin B. Forsythe National Wildlife Refuge, New Jersey
Elevation distribution in the Edwin B. Forsythe National Wildlife Refuge (EBFNWR), which spans over Great Bay, Little Egg Harbor, and Barnegat Bay in New Jersey, USA is given in terms of mean elevation of conceptual marsh units defined by Defne and Ganju (2016). The elevation data is based on the 1-meter resampled 1/9 arc-second resolution USGS National Elevation Data. As part of the...
Filter Total Items: 121
Quantification of storm-induced bathymetric change in a back-barrier estuary Quantification of storm-induced bathymetric change in a back-barrier estuary
Geomorphology is a fundamental control on ecological and economic function of estuaries. However, relative to open coasts, there has been little quantification of storm-induced bathymetric change in back-barrier estuaries. Vessel-based and airborne bathymetric mapping can cover large areas quickly, but change detection is difficult because measurement errors can be larger than the actual...
Authors
Neil K. Ganju, Steven E. Suttles, Alexis Beudin, Daniel J. Nowacki, Jennifer L. Miselis, Brian D. Andrews
Balanced sediment fluxes in southern California’s Mediterranean-climate zone salt marshes Balanced sediment fluxes in southern California’s Mediterranean-climate zone salt marshes
Salt marsh elevation and geomorphic stability depends on mineral sedimentation. Many Mediterranean-climate salt marshes along southern California, USA coast import sediment during El Niño storm events, but sediment fluxes and mechanisms during dry weather are potentially important for marsh stability. We calculated tidal creek sediment fluxes within a highly modified, sediment-starved, 1...
Authors
Jordan A. Rosencranz, Neil K. Ganju, Richard F. Ambrose, Sandra M. Brosnahan, Patrick J. Dickhudt, Glenn R. Guntenspergen, Glen M. MacDonald, John Y. Takekawa, Karen M. Thorne
Sediment chemistry and toxicity in Barnegat Bay, New Jersey: Pre- and post-Hurricane Sandy, 2012–13 Sediment chemistry and toxicity in Barnegat Bay, New Jersey: Pre- and post-Hurricane Sandy, 2012–13
Hurricane Sandy made landfall in Barnegat Bay, October, 29, 2012, damaging shorelines and infrastructure. Estuarine sediment chemistry and toxicity were investigated before and after to evaluate potential environmental health impacts and to establish post-event baseline sediment-quality conditions. Trace element concentrations increased throughout Barnegat Bay up to two orders of...
Authors
Kristin M. Romanok, Zoltan Szabo, Timothy J. Reilly, Zafer Defne, Neil K. Ganju
Progress and challenges in coupled hydrodynamic-ecological estuarine modeling Progress and challenges in coupled hydrodynamic-ecological estuarine modeling
Numerical modeling has emerged over the last several decades as a widely accepted tool for investigations in environmental sciences. In estuarine research, hydrodynamic and ecological models have moved along parallel tracks with regard to complexity, refinement, computational power, and incorporation of uncertainty. Coupled hydrodynamic-ecological models have been used to assess...
Authors
Neil K. Ganju, Mark J. Brush, Brenda Rashleigh, Alfredo L. Aretxabaleta, Pilar del Barrio, Jason S. Grear, Lora A. Harris, Samuel J. Lake, Grant McCardell, James O'Donnell, David K. Ralston, Richard P. Signell, Jeremy Testa, Jamie M. P. Vaudrey
Estimating time-dependent connectivity in marine systems Estimating time-dependent connectivity in marine systems
Hydrodynamic connectivity describes the sources and destinations of water parcels within a domain over a given time. When combined with biological models, it can be a powerful concept to explain the patterns of constituent dispersal within marine ecosystems. However, providing connectivity metrics for a given domain is a three-dimensional problem: two dimensions in space to define the...
Authors
Zafer Defne, Neil K. Ganju, Alfredo Aretxabaleta
Colored dissolved organic matter in shallow estuaries: relationships between carbon sources and light attenuation Colored dissolved organic matter in shallow estuaries: relationships between carbon sources and light attenuation
Light availability is of primary importance to the ecological function of shallow estuaries. For example, benthic primary production by submerged aquatic vegetation is contingent upon light penetration to the seabed. A major component that attenuates light in estuaries is colored dissolved organic matter (CDOM). CDOM is often measured via a proxy, fluorescing dissolved organic matter...
Authors
W.K. Oestreich, Neil K. Ganju, John W. Pohlman, Steven E. Suttles
Non-USGS Publications**
Defne, Z., N. K. Ganju, and A. Aretxabaleta
(2016), Estimating time-dependent
connectivity in marine systems, Geophys.
Res. Lett., 43, doi:10.1002/2015GL066888.
(2016), Estimating time-dependent
connectivity in marine systems, Geophys.
Res. Lett., 43, doi:10.1002/2015GL066888.
Ganju, N. K., Brush, M. J., Rashleigh, B., Aretxabaleta, A. L., del Barrio, P., Grear, J. S., ... & Vaudrey, J. M., 2015, Progress and challenges in coupled hydrodynamic-ecological estuarine modeling, Estuaries and Coasts, 1-22.
Ganju, N.K., Jaffe, B.E., and Schoellhamer, D.H., 2011, Discontinuous hindcast simulations of estuarine bathymetric change: a case study from Suisun Bay, California. Estuarine, Coastal and Shelf Science, 93, 142-150.
Ganju, N.K., and Schoellhamer, D.H., 2006, Annual sediment flux estimates in a tidal strait using surrogate measurements. Estuarine, Coastal and Shelf Science, 69, 165-178.
Ganju, N.K., Schoellhamer, D.H., and Jaffe, B.E., 2009, Hindcasting of decadal-timescale estuarine bathymetric change with a tidal-timescale model. Journal of Geophysical Research-Earth Surface, 114, F04019, doi:10.1029/2008JF001191.
Ganju, N.K., Schoellhamer, D.H., Warner, J.C., Barad, M.F., and Schladow, S.G., 2004, Tidal oscillation of sediment between a river and a bay: a conceptual model. Estuarine, Coastal and Shelf Science, 60(1), 81-90.
Ganju, N.K., and Sherwood, C.R., 2010, Effect of roughness formulation on the performance of a coupled wave, hydrodynamic, and sediment transport model. Ocean Modelling, 33, 299-313.
Gartner, J.W., and Ganju, N.K., 2007, Correcting acoustic Doppler current profiler discharge measurement bias from moving-bed conditions without global positioning during the 2004 Glen Canyon Dam controlled flood on the Colorado River. Limnology and Oceanography: Methods, 5, 156-162.
Leonardi, N., Ganju, N.K. and Fagherazzi, S., 2016. A linear relationship between wave power and erosion determines salt-marsh resilience to violent storms and hurricanes. Proceedings of the National Academy of Sciences, 113(1), pp.64-68.
Kirincich, A. R., Lentz, S. J., Farrar, J. T., and Ganju, N. K., 2013, The Spatial Structure of Tidal and Mean Circulation over the Inner Shelf South of Martha's Vineyard, Massachusetts. Journal of Physical Oceanography, 43(9).
Miselis, J.L., Andrews, B.D., Nicholson, R.S., Defne, Z., Ganju, N.K. and Navoy, A., 2015. Evolution of mid-Atlantic coastal and back-barrier estuary environments in response to a hurricane: Implications for barrier-estuary connectivity. Estuaries and Coasts, pp.1-19.
Oestreich, W. K., Ganju, N. K., Pohlman, J. W., and Suttles, S. E., 2016. Colored dissolved organic matter in shallow estuaries: relationships between carbon sources and light attenuation, Biogeosciences, 13, 583-595, doi:10.5194/bg-13-583-2016.
Rosencranz, J.A., Ganju, N.K., Ambrose, R.F., Brosnahan, S.M., Dickhudt, P.J., Guntenspergen, G.R., MacDonald, G.M., Takekawa, J.Y, and Thorne, K.M., 2015, Balanced sediment fluxes in southern California’s Mediterranean-climate zone salt marshes, Estuaries and Coasts, DOI 10.1007/s12237-015-0056-y.
**Disclaimer: The views expressed in Non-USGS publications are those of the author and do not represent the views of the USGS, Department of the Interior, or the U.S. Government.
Science and Products
Filter Total Items: 19
Filter Total Items: 76
Elevation of marsh units in Assateague Island National Seashore and Chincoteague Bay, Maryland and Virginia Elevation of marsh units in Assateague Island National Seashore and Chincoteague Bay, Maryland and Virginia
Elevation distribution in the Assateague Island National Seashore (ASIS) salt marsh complex and Chincoteague Bay is given in terms of mean elevation of conceptual marsh units defined by Defne and Ganju (2018). The elevation data is based on the 1-meter resolution Coastal National Elevation Database (CoNED). Through scientific efforts initiated with the Hurricane Sandy Science Plan, the U...
Mean tidal range in marsh units of Plum Island Estuary and Parker River salt marsh complex, Massachusetts Mean tidal range in marsh units of Plum Island Estuary and Parker River salt marsh complex, Massachusetts
Biomass production is positively correlated with mean tidal range in salt marshes along the Atlantic coast of the United States of America. Recent studies support the idea that enhanced stability of the marshes can be attributed to increased vegetative growth due to increased tidal range. This dataset displays the spatial variation of mean tidal range (i.e. Mean Range of Tides, MN) in...
Elevation of marsh units in Plum Island Estuary and Parker River salt marsh complex, Massachusetts Elevation of marsh units in Plum Island Estuary and Parker River salt marsh complex, Massachusetts
This data release provides elevation distribution in the Plum Island Estuary and Parker River (PIEPR) salt marsh complex. Elevation distribution was calculated in terms of mean elevation of conceptual marsh units defined by Defne and Ganju (2018). The elevation data was based on the 1-meter gridded Digital Elevation Model and supplemented by 1-meter resampled 1/9 arc-second resolution...
Unvegetated to vegetated marsh ratio in Plum Island Estuary and Parker River salt marsh complex, Massachusetts Unvegetated to vegetated marsh ratio in Plum Island Estuary and Parker River salt marsh complex, Massachusetts
Unvegetated to vegetated marsh ratio (UVVR) in the Plum Island Estuary and Parker River (PIEPR) salt marsh complex was computed based on conceptual marsh units defined by Defne and Ganju (2018). UVVR was calculated based on U.S. Department of Agriculture National Agriculture Imagery Program (NAIP) 1-meter resolution imagery. Through scientific efforts initiated with the Hurricane Sandy...
Conceptual marsh units for Plum Island Estuary and Parker River salt marsh complex, Massachusetts Conceptual marsh units for Plum Island Estuary and Parker River salt marsh complex, Massachusetts
The salt marsh complex of Plum Island Estuary and Parker River (PIEPR) was delineated to smaller, conceptual marsh units by geoprocessing of surface elevation data. Flow accumulation based on the relative elevation of each location was used to determine the ridge lines that separate each marsh unit while the surface slope was used to automatically assign each unit a drainage point, where...
Elevation of salt marsh units in Edwin B. Forsythe National Wildlife Refuge, New Jersey Elevation of salt marsh units in Edwin B. Forsythe National Wildlife Refuge, New Jersey
Elevation distribution in the Edwin B. Forsythe National Wildlife Refuge (EBFNWR), which spans over Great Bay, Little Egg Harbor, and Barnegat Bay in New Jersey, USA is given in terms of mean elevation of conceptual marsh units defined by Defne and Ganju (2016). The elevation data is based on the 1-meter resampled 1/9 arc-second resolution USGS National Elevation Data. As part of the...
Filter Total Items: 121
Quantification of storm-induced bathymetric change in a back-barrier estuary Quantification of storm-induced bathymetric change in a back-barrier estuary
Geomorphology is a fundamental control on ecological and economic function of estuaries. However, relative to open coasts, there has been little quantification of storm-induced bathymetric change in back-barrier estuaries. Vessel-based and airborne bathymetric mapping can cover large areas quickly, but change detection is difficult because measurement errors can be larger than the actual...
Authors
Neil K. Ganju, Steven E. Suttles, Alexis Beudin, Daniel J. Nowacki, Jennifer L. Miselis, Brian D. Andrews
Balanced sediment fluxes in southern California’s Mediterranean-climate zone salt marshes Balanced sediment fluxes in southern California’s Mediterranean-climate zone salt marshes
Salt marsh elevation and geomorphic stability depends on mineral sedimentation. Many Mediterranean-climate salt marshes along southern California, USA coast import sediment during El Niño storm events, but sediment fluxes and mechanisms during dry weather are potentially important for marsh stability. We calculated tidal creek sediment fluxes within a highly modified, sediment-starved, 1...
Authors
Jordan A. Rosencranz, Neil K. Ganju, Richard F. Ambrose, Sandra M. Brosnahan, Patrick J. Dickhudt, Glenn R. Guntenspergen, Glen M. MacDonald, John Y. Takekawa, Karen M. Thorne
Sediment chemistry and toxicity in Barnegat Bay, New Jersey: Pre- and post-Hurricane Sandy, 2012–13 Sediment chemistry and toxicity in Barnegat Bay, New Jersey: Pre- and post-Hurricane Sandy, 2012–13
Hurricane Sandy made landfall in Barnegat Bay, October, 29, 2012, damaging shorelines and infrastructure. Estuarine sediment chemistry and toxicity were investigated before and after to evaluate potential environmental health impacts and to establish post-event baseline sediment-quality conditions. Trace element concentrations increased throughout Barnegat Bay up to two orders of...
Authors
Kristin M. Romanok, Zoltan Szabo, Timothy J. Reilly, Zafer Defne, Neil K. Ganju
Progress and challenges in coupled hydrodynamic-ecological estuarine modeling Progress and challenges in coupled hydrodynamic-ecological estuarine modeling
Numerical modeling has emerged over the last several decades as a widely accepted tool for investigations in environmental sciences. In estuarine research, hydrodynamic and ecological models have moved along parallel tracks with regard to complexity, refinement, computational power, and incorporation of uncertainty. Coupled hydrodynamic-ecological models have been used to assess...
Authors
Neil K. Ganju, Mark J. Brush, Brenda Rashleigh, Alfredo L. Aretxabaleta, Pilar del Barrio, Jason S. Grear, Lora A. Harris, Samuel J. Lake, Grant McCardell, James O'Donnell, David K. Ralston, Richard P. Signell, Jeremy Testa, Jamie M. P. Vaudrey
Estimating time-dependent connectivity in marine systems Estimating time-dependent connectivity in marine systems
Hydrodynamic connectivity describes the sources and destinations of water parcels within a domain over a given time. When combined with biological models, it can be a powerful concept to explain the patterns of constituent dispersal within marine ecosystems. However, providing connectivity metrics for a given domain is a three-dimensional problem: two dimensions in space to define the...
Authors
Zafer Defne, Neil K. Ganju, Alfredo Aretxabaleta
Colored dissolved organic matter in shallow estuaries: relationships between carbon sources and light attenuation Colored dissolved organic matter in shallow estuaries: relationships between carbon sources and light attenuation
Light availability is of primary importance to the ecological function of shallow estuaries. For example, benthic primary production by submerged aquatic vegetation is contingent upon light penetration to the seabed. A major component that attenuates light in estuaries is colored dissolved organic matter (CDOM). CDOM is often measured via a proxy, fluorescing dissolved organic matter...
Authors
W.K. Oestreich, Neil K. Ganju, John W. Pohlman, Steven E. Suttles
Non-USGS Publications**
Defne, Z., N. K. Ganju, and A. Aretxabaleta
(2016), Estimating time-dependent
connectivity in marine systems, Geophys.
Res. Lett., 43, doi:10.1002/2015GL066888.
(2016), Estimating time-dependent
connectivity in marine systems, Geophys.
Res. Lett., 43, doi:10.1002/2015GL066888.
Ganju, N. K., Brush, M. J., Rashleigh, B., Aretxabaleta, A. L., del Barrio, P., Grear, J. S., ... & Vaudrey, J. M., 2015, Progress and challenges in coupled hydrodynamic-ecological estuarine modeling, Estuaries and Coasts, 1-22.
Ganju, N.K., Jaffe, B.E., and Schoellhamer, D.H., 2011, Discontinuous hindcast simulations of estuarine bathymetric change: a case study from Suisun Bay, California. Estuarine, Coastal and Shelf Science, 93, 142-150.
Ganju, N.K., and Schoellhamer, D.H., 2006, Annual sediment flux estimates in a tidal strait using surrogate measurements. Estuarine, Coastal and Shelf Science, 69, 165-178.
Ganju, N.K., Schoellhamer, D.H., and Jaffe, B.E., 2009, Hindcasting of decadal-timescale estuarine bathymetric change with a tidal-timescale model. Journal of Geophysical Research-Earth Surface, 114, F04019, doi:10.1029/2008JF001191.
Ganju, N.K., Schoellhamer, D.H., Warner, J.C., Barad, M.F., and Schladow, S.G., 2004, Tidal oscillation of sediment between a river and a bay: a conceptual model. Estuarine, Coastal and Shelf Science, 60(1), 81-90.
Ganju, N.K., and Sherwood, C.R., 2010, Effect of roughness formulation on the performance of a coupled wave, hydrodynamic, and sediment transport model. Ocean Modelling, 33, 299-313.
Gartner, J.W., and Ganju, N.K., 2007, Correcting acoustic Doppler current profiler discharge measurement bias from moving-bed conditions without global positioning during the 2004 Glen Canyon Dam controlled flood on the Colorado River. Limnology and Oceanography: Methods, 5, 156-162.
Leonardi, N., Ganju, N.K. and Fagherazzi, S., 2016. A linear relationship between wave power and erosion determines salt-marsh resilience to violent storms and hurricanes. Proceedings of the National Academy of Sciences, 113(1), pp.64-68.
Kirincich, A. R., Lentz, S. J., Farrar, J. T., and Ganju, N. K., 2013, The Spatial Structure of Tidal and Mean Circulation over the Inner Shelf South of Martha's Vineyard, Massachusetts. Journal of Physical Oceanography, 43(9).
Miselis, J.L., Andrews, B.D., Nicholson, R.S., Defne, Z., Ganju, N.K. and Navoy, A., 2015. Evolution of mid-Atlantic coastal and back-barrier estuary environments in response to a hurricane: Implications for barrier-estuary connectivity. Estuaries and Coasts, pp.1-19.
Oestreich, W. K., Ganju, N. K., Pohlman, J. W., and Suttles, S. E., 2016. Colored dissolved organic matter in shallow estuaries: relationships between carbon sources and light attenuation, Biogeosciences, 13, 583-595, doi:10.5194/bg-13-583-2016.
Rosencranz, J.A., Ganju, N.K., Ambrose, R.F., Brosnahan, S.M., Dickhudt, P.J., Guntenspergen, G.R., MacDonald, G.M., Takekawa, J.Y, and Thorne, K.M., 2015, Balanced sediment fluxes in southern California’s Mediterranean-climate zone salt marshes, Estuaries and Coasts, DOI 10.1007/s12237-015-0056-y.
**Disclaimer: The views expressed in Non-USGS publications are those of the author and do not represent the views of the USGS, Department of the Interior, or the U.S. Government.