Publications
Read publications and other informational products to learn more about USGS science occurring in the Mississippi Basin.
Filter Total Items: 5566
Opportunities and challenges of macrogenetic studies Opportunities and challenges of macrogenetic studies
The rapidly emerging field of macrogenetics focuses on analysing publicly accessible genetic datasets from thousands of species to explore large-scale patterns and predictors of intraspecific genetic variation. Facilitated by advances in evolutionary biology, technology, data infrastructure, statistics and open science, macrogenetics addresses core evolutionary hypotheses (such as...
Authors
Deborah M. Leigh, Charles B. van Rees, Katie L Millette, Martin F Breed, Chloé Schmidt, Laura D. Bertola, Brian K. Hand, Margaret Hunter, Evelyn L. Jensen, Francine Kershaw, Libby Liggins, Gordon Luikart, Stephanie Manel, Joachim Mergeay, Joshua M. Miller, Gernot Segelbacher, Sean M. Hoban, Ivan Paz-Vinas
General water-quality conditions, long-term trends, and network analysis at selected sites within the Ambient Water-Quality Monitoring Network in Missouri, water years 1993–2017 General water-quality conditions, long-term trends, and network analysis at selected sites within the Ambient Water-Quality Monitoring Network in Missouri, water years 1993–2017
The U.S. Geological Survey, in cooperation with the Missouri Department of Natural Resources, collects data pertaining to the surface-water resources of Missouri. Established in 1964, the Ambient Water-Quality Monitoring Network (AWQMN) consisted of 69 sites in 2017. Two additional sites from the National Water-Quality Program are included with the AWQMN sites for the analyses in this...
Authors
Joseph M. Richards, Miya N. Barr
Genetic diversity of immature Kemp's ridley (Lepidochelys kempii) sea turtles from the northern Gulf of Mexico Genetic diversity of immature Kemp's ridley (Lepidochelys kempii) sea turtles from the northern Gulf of Mexico
The Kemp’s ridley (Lepidochelys kempii) is the world’s most endangered sea turtle species. Predominately nesting at only one beach in Mexico, this species declined to an estimated 300 females in the mid-1980s. Conservation efforts in the United States and Mexico, including a head start programme in southern Texas in which hatchlings were reared in captivity for several months before...
Authors
Margaret Lamont, Nickolas Moreno, Fatima Y. Camacho-Sanchez, H. Hugo Acosta-Sanchez, Scott Glaberman, Miguel A. Reyes-Lopez, Ylenia Chiari
Native mammals lack resilience to invasive generalist predator Native mammals lack resilience to invasive generalist predator
Invasive predators have caused catastrophic declines in native wildlife across the globe. Though research has focused on the initial establishment, rapid growth, and spread of invasive predators, our understanding of prey resilience to established invasive predators remains limited. As a direct result of invasive Burmese pythons (Python molurus bivittatus), medium- to large-bodied native...
Authors
Paul J. Taillie, Kristen Hart, Adia R. Sovie, Robert A. McCleery
Chronic exposure to glyphosate in Florida manatee Chronic exposure to glyphosate in Florida manatee
Florida manatees depend on freshwater environments as a source of drinking water and as warm-water refuges. These freshwater environments are in direct contact with human activities were glyphosate-based herbicides are being used. Glyphosate is the most used herbicide worldwide and it is intensively used in Florida as a sugarcane ripener and to control invasive aquatic plants. The...
Authors
Maite De María, Cecilia Silva-Sanchez, Kevin J. Kroll, Michael T. Walsh, Mohammad-Zaman Nouri, Margaret E. Hunter, Monica Ross, Tonya M. Clauss, Nancy D. Denslow
Coastal observations of alligator snapping turtles in the Florida Panhandle Coastal observations of alligator snapping turtles in the Florida Panhandle
The genus Macrochelys (alligator snapping turtles) inhabits river systems that empty into the Gulf of Mexico from Florida to Texas and contains the largest freshwater turtles in North America (Pritchard 2006). This paper details observations of Macrochelys on the coast and barrier islands in Franklin and Gulf counties, Florida, that contribute to our knowledge of their movements in...
Authors
Kevin M. Enge, Bradley S. Smith, Brooke L. Talley, Terri Cannon, Travis M. Thomas, Daniel J. Catizone
New amphibian and reptile parish records from Louisiana, USA New amphibian and reptile parish records from Louisiana, USA
Dundee and Rossman (1989) published distribution maps of Louisiana herpetofaunal species in The Amphibians and Reptiles of Louisiana over 30 years ago. Since then many records have been published, mostly in Herpetological Review, documenting additions to these original maps. Though many are single species additions, several compilations of new Louisiana records have been published...
Authors
Brad Glorioso
Range-wide population genetic analysis of Seaside Sparrows (Ammospiza maritima) supports at least five distinct population segments that do not align with current subspecies descriptions Range-wide population genetic analysis of Seaside Sparrows (Ammospiza maritima) supports at least five distinct population segments that do not align with current subspecies descriptions
As an obligate salt marsh species, Seaside Sparrows (Ammospiza maritima) are vulnerable to numerous threats including climate change, coastal erosion, sea-level rise, and both natural and anthropogenic disasters. Of the 9 recognized subspecies, 2 are extinct and 1 is endangered. Previous genetic analyses of mitochondrial DNA (mtDNA) and microsatellite loci showed that current taxonomy...
Authors
Kathryn E.C. Davis, Amie E. Settlecowski, Mackenzie R. Roeder, Carolyn Enloe, Thomas Virzi, Margaret Hunter, Stefan Woltmann, Sabrina S. Taylor
Establishing conservation units to promote recovery of two threatened freshwater mussel species (Bivalvia: Unionida: Potamilus) Establishing conservation units to promote recovery of two threatened freshwater mussel species (Bivalvia: Unionida: Potamilus)
Population genomics has significantly increased our ability to make inferences about microevolutionary processes and demographic histories, which have the potential to improve protection and recovery of imperiled species. Freshwater mussels (Bivalvia: Unionida) represent one of the most imperiled groups of organisms globally. Despite systemic decline of mussel abundance and diversity...
Authors
Chase H. Smith, Nathan Johnson, Clinton R. Robertson, Robert D. Doyle, Charles R. Randklev
FLUXNET-CH4: A global, multi-ecosystem database and analysis of methane seasonality from freshwater wetlands FLUXNET-CH4: A global, multi-ecosystem database and analysis of methane seasonality from freshwater wetlands
Methane (CH4) emissions from natural landscapes constitute roughly half of global CH4 contributions to the atmosphere, yet large uncertainties remain in the absolute magnitude and the seasonality of emission quantities and drivers. Eddy covariance (EC) measurements of CH4 flux are ideal for constraining ecosystem-scale CH4 emissions due to quasi-continuous and high-temporal-resolution...
Authors
Kyle B. Delwiche, Sarah Knox, Avni Malhotra, Etienne Fluet-Chouinard, Gavin McNicol, Sarah Feron, Zutao Ouyang, Dario Papale, Carlo Trotta, Eleonora Canfora, You-Wei Cheah, Danielle Christianson, Ma. Carmelita R. Alberto, Pavel Alekseychik, Mika Aurela, Dennis Baldocchi, Sheel Bansal, David P. Billesbach, Gil Bohrer, Rosvel Bracho, Nina Buchmann, David I. Campbell, Gerardo Celis, Weinan Chen, Jiquan Chen, Housen Chu, Higo J Dalmagro, Sigrid Dengel, Ankur R. Desai, Matteo Detto, Han Dolman, Elke Eichelmann, Eugenie S. Euskirchen, Daniela Famulari, Kathrin Fuchs, Mathias Goeckede, Sébastien Gogo, Mangaliso J Gondwe, Jordan P. Goodrich, Pia Gottschalk, Scott L. Graham, Martin Heimann, Manuel Helbig, Carole Helfter, Kyle S. Hemes, Takashi Hirano, David Hollinger, Lukas Hortnagl, Hiroki Iwata, Adrien Jacotot, Joachim Jansen, Gerald Jurasinski, Minseok Kang, Kuno Kasak, John King, Janina Klatt, Franziska Koebsch, Ken Krauss, Derrick Y.F. Lai, Annalea Lohila, Ivan Mammarella, Luca B Marchesini, Giovanni Manca, Jaclyn H Matthes, Trofim Maximov, Lutz Merbold, Bhaskar Mitra, Timothy H. Morin, Eiko Nemitz, Mats B. Nilsson, Shuli Niu, Walter C. Oechel, Patricia Y. Oikawa, Keisuke Ono, Matthias Peichl, Olli Peltola, Michele L. Reba, Andrew D. Richardson, William Riley, Benjamin RK Runkle, Youngryel Ryu, Torsten Sachs, Ayaka Sakabe, Camilo Rey Sanchez, Edward A. Schuur, Karina VR Schafer, Oliver Sonnentag, Jed P. Sparks, Ellen Stuart-Haëntjens, Cove Sturtevant, Ryan C. Sullivan, Daphne J. Szutu, Jonathan E Thom, Margaret S. Torn, Eeva-Stiina Tuittila, Jessica Turner, Masahito Ueyama, Alex C. Valach, Rodrigo Vargas, Andrej Varlagin, Alma Vazquez-Lule, Joseph G. Verfaillie, Timo Vesala, George L Vourlitis, Eric Ward, Christian Wille, Georg Wohlfahrt, Guan Xhuan Wong, Zhen Zhang, Donatella Zona, Lisamarie Windham-Myers, Benjamin Poulter, Robert B. Jackson
The Everglades vulnerability analysis—Integrating ecological models and addressing uncertainty The Everglades vulnerability analysis—Integrating ecological models and addressing uncertainty
The Everglades vulnerability analysis (EVA) is a project led by the U.S. Geological Survey in cooperation with the National Park Service and U.S. Army Corps of Engineers to accomplish one of the science goals of Restoration Coordination & Verification (RECOVER), a multiagency group responsible for providing scientific and technical evaluations and assessments for improving the ability of...
Authors
Laura E. D’Acunto, Stephanie S. Romanach, Saira M. Haider, Caitlin E. Hackett, Jennifer H. Nestler, Dilip Shinde, Leonard G. Pearlstine
Modeling the bioavailability of nickel and zinc to Ceriodaphnia dubia and Neocloeon triangulifer in toxicity tests with Natural Waters Modeling the bioavailability of nickel and zinc to Ceriodaphnia dubia and Neocloeon triangulifer in toxicity tests with Natural Waters
We studied biotic ligand model (BLM) predictions of toxicity of nickel (Ni) and zinc (Zn) in natural waters from Illinois and Minnesota USA which had combinations of pH, hardness, and dissolved organic carbon (DOC) more extreme than 99.7% of waters in a nationwide database. We conducted 7-d chronic tests with Ceriodaphnia dubia, and 96-hr acute test and 14-d chronic tests with Neocloeon
Authors
John M. Besser, Chris D. Ivey, Jeffery A. Steevens, Danielle M. Cleveland, David J. Soucek, Amy Dickinson, Eric J. Van Genderen, Adam C. Ryan, Chris E. Schlekat, Emily R. Garman, Elizabeth Middleton, Robert C. Santore