Publications
This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.
Filter Total Items: 42888
Combining past and contemporary species occurrences with ordinal species distribution modeling to investigate responses to climate change Combining past and contemporary species occurrences with ordinal species distribution modeling to investigate responses to climate change
Many organisms leave evidence of their former occurrence, such as scat, abandoned burrows, middens, ancient eDNA or fossils, which indicate areas from which a species has since disappeared. However, combining this evidence with contemporary occurrences within a single modeling framework remains challenging. Traditional binary species-distribution modeling reduces occurrence to two...
Authors
Erik A. Beever, Marie L. Westover, Adam B. Smith, Francis D. Gerraty, Peter D. Billman, Felisa A. Smith
Constraining the earthquake recording threshold of intraslab earthquakes with turbidites in southcentral Alaska’s lakes and fjords Constraining the earthquake recording threshold of intraslab earthquakes with turbidites in southcentral Alaska’s lakes and fjords
Strong ground motion from intraslab earthquakes, which do not produce primary paleoseismic evidence, may initiate gravity-driven turbidity flows in subaqueous basins. The resulting deposits (turbidites) can provide a paleoseismic proxy if the conditions that initiate these flows are known. To better constrain the initiating conditions, we use two recent intraslab earthquakes in...
Authors
Drake Moore Singleton, Daniel S. Brothers, Peter J. Haeussler, Robert C. Witter, Jenna C. Hill
Outmigration behavior and survival of juvenile Chinook salmon (Oncorhynchus tshawytscha) in response to deep drawdown of the Lookout Point Project, Middle Fork Willamette River, Oregon Outmigration behavior and survival of juvenile Chinook salmon (Oncorhynchus tshawytscha) in response to deep drawdown of the Lookout Point Project, Middle Fork Willamette River, Oregon
An acoustic telemetry study was conducted during August 2023–February 2024 to evaluate outmigration behavior and survival of juvenile Chinook salmon (Oncorhynchus tshawytscha) in the Middle Fork Willamette River, Oregon, during an experimental operation that was designed to facilitate downstream passage through two reservoirs and two dams. The experimental operation consisted of lowering...
Authors
Dalton J. Hance, Tobias J. Kock, Jake R. Kelley, Amy C. Hansen, Russell W. Perry, Scott D Fielding
Distribution, abundance, breeding activities, and habitat use of the Least Bell's Vireo at Marine Corps Base Camp Pendleton, California—2023 annual report Distribution, abundance, breeding activities, and habitat use of the Least Bell's Vireo at Marine Corps Base Camp Pendleton, California—2023 annual report
Executive Summary The purpose of this report is to provide the Marine Corps with an annual summary of abundance, breeding activity, demography, and habitat use of endangered Least Bell’s Vireos (Vireo bellii pusillus) at Marine Corps Base Camp Pendleton, California (MCBCP or Base). Surveys for the Least Bell's Vireo were completed at MCBCP between April 11 and July 20, 2023. Core survey...
Authors
Suellen Lynn, Barbara E. Kus
Evaluation of the gap intercept method to measure rangeland connectivity Evaluation of the gap intercept method to measure rangeland connectivity
Characterizing the connectivity of materials, organisms, and energy on rangelands is critical to understanding and managing ecosystem response to disturbances. For over twenty years, scientists and rangeland managers have used the gap intercept method to monitor connectivity. However, using gap intercept measurements to infer ecosystem processes or inform management actions and...
Authors
Sarah E. McCord, Joseph R. Brehm, Lea A. Condon, Leah Dreesmann, Lisa M. Ellsworth, Matthew J. Germino, Jeffrey E. Herrick, Brian K. Howard, Emily Kachergis, Jason W. Karl, Anna C. Knight, Savannah Meadors, Aleta Nafus, Beth A. Newingham, Peter J. Olsoy, Nicole Pietrasiak, David S. Pilliod, Anthony Schaefer, Nicholas P. Webb, Brandi E. Wheeler, C. Jason Williams, Kristina E. Young
U.S. Geological Survey research and assessments supporting carbon dioxide removal U.S. Geological Survey research and assessments supporting carbon dioxide removal
Both carbon capture and storage (CCS) and carbon dioxide removal (CDR) are methods to limit future global temperature rise and ocean acidification. CCS sequesters (stores) carbon dioxide (CO2) captured from industrial sources thereby preventing the CO2 from reaching the atmosphere. The captured CO2 is injected into underground geologic reservoirs or is converted into stable industrial...
Authors
Peter D. Warwick, Madalyn S. Blondes, Judith Z. Drexler, Kevin D. Kroeger, Zhiliang Zhu
New technology for an ancient fish: A lamprey life cycle modeling tool with an R Shiny application New technology for an ancient fish: A lamprey life cycle modeling tool with an R Shiny application
Lampreys (Petromyzontiformes) are an ancient group of fishes with complex life histories. We created a life cycle model that includes an R Shiny interactive web application interface to simulate abundance by life stage. This will allow scientists and managers to connect available demographic information in a framework that can be applied to questions regarding lamprey biology and...
Authors
Dylan Gerald-Everett Gomes, Joseph R. Benjamin, Benjamin J. Clemens, Ralph Lampman, Jason Dunham
Predicted occurrence and abundance habitat suitability of invasive plants in the contiguous United States: Updates for the INHABIT web tool. Predicted occurrence and abundance habitat suitability of invasive plants in the contiguous United States: Updates for the INHABIT web tool.
Invasive plant species have substantial negative ecological and economic impacts. Geographic information on the potential and actual distributions of invasive plants is critical for their effective management. For many regions, numerous sources of predictive geographic information exist for invasive plants, often in the form of outputs from species distribution models (SDMs). The...
Authors
Catherine S. Jarnevich, Peder Engelstad, Demetra A. Williams, Keana S. Shadwell, Cameron J. Reimer, Grace C. Henderson, Janet S. Prevey, Ian S. Pearse
A hierarchical model for eDNA fate and transport dynamics accommodating low concentration samples A hierarchical model for eDNA fate and transport dynamics accommodating low concentration samples
Environmental DNA (eDNA) sampling is an increasingly important tool for answering ecological questions and informing aquatic species management; however, several factors currently limit the reliability of ecological inference from eDNA sampling. Two particular challenges are (1) determining species source location(s) and (2) accurately and precisely measuring low concentration eDNA...
Authors
Ben Augustine, Patrick Ross Hutchins, Devin Nicole Jones-Slobodian, Jacob R. Williams, Eric Leinonen, Adam Sepulveda
The cost of self-defense: Browsing effects in the rare plant species Salix arizonica The cost of self-defense: Browsing effects in the rare plant species Salix arizonica
Coevolution between plants and their animal predators has led to diverse defensive adaptations. Multiple theories of defense propose that there are resource allocation costs associated with producing chemical defenses. One leading hypothesis, optimal defense theory (ODT), suggests that natural selection will result in the allocation of resources to defenses that optimize the cost-to...
Authors
Shannon J. Lencioni, Robert Massatti, Ken Keefover-Ring, Liza M. Holeski
Declining ecological resilience and invasion resistance under climate change in the sagebrush region, United States Declining ecological resilience and invasion resistance under climate change in the sagebrush region, United States
In water-limited dryland ecosystems of the Western United States, climate change is intensifying the impacts of heat, drought, and wildfire. Disturbances often lead to increased abundance of invasive species, in part, because dryland restoration and rehabilitation are inhibited by limited moisture and infrequent plant recruitment events. Information on ecological resilience to...
Authors
Daniel Rodolphe Schlaepfer, Jeanne C. Chambers, Alexandra K. Urza, Brice B. Hanberry, Jessi L. Brown, David I. Board, Steven B. Campbell, Karen J. Clause, Michele R. Crist, John B. Bradford
Structurally selective ozonolysis of p-phenylenediamines and toxicity in coho salmon and rainbow trout Structurally selective ozonolysis of p-phenylenediamines and toxicity in coho salmon and rainbow trout
The tire-rubber-derived ozonation product of N-(1,3-dimethylbutyl)-N′-phenyl-p-phenylenediamine (6PPD), N-(1,3-dimethylbutyl)-N′-phenyl-p-phenylenediamine-quinone (6PPD-Q), was recently discovered to cause acute mortality in coho salmon (Oncorhynchus kisutch). para-Phenylenediamines (PPDs) with variable side chains distinct from 6PPD have been identified as potential replacement...
Authors
Linna Xie, Jie Yu, Pranav Nair, Jianxian Sun, Holly Barrett, Oliver Meek, Xing Qian, Diwen Yang, Lisa V. Kennedy, Derek Kozakiewicz, Chunyan Hao, John D. Hansen, Justin Blaine Greer, Jonathan P.D. Abbatt, Hui Peng