Publications

A wetland restoration demonstration project examined the effects of a permanently flooded wetland on subsidence of peat soils. The project, started in 1997, was done on Twitchell Island, in the Sacramento-San Joaquin Delta of California. Conversion of agricultural land to a wetland has changed many of the biogeochemical processes controlling dissolved organic carbon (DOC) release from...

Flow-path and time-of-travel results for the Mojave River ground-water basin, southern California, calculated using the ground-water flow model MODFLOW and particle-tracking model MODPATH were similar to flow path and time-of-travel interpretations derived from delta-deuterium and carbon-14 data. Model and isotopic data both show short flow paths and young ground-water ages throughout...

Nesting chronology, habitat use, subcolony use, and hatchability were documented for the Black-crowned Night Heron (Nycticorax nycticorax) nesting at Alcatraz Island, San Francisco Bay, California during 1990-2002. Reproductive success was estimated using the Mayfield method and compared among years. Totals of monitored nests per year ranged from 68 in 2001 to 341 in 1996, with a trend...

The primary objective of the present study was to test whether agricultural chemical runoff was associated with in-stream genotoxicity in native fish. Using Sacramento sucker (Catostomus occidentalis), we combined field-caging experiments in an agriculturally dominated watershed with controlled laboratory exposures to field-collected water samples, and we coupled genotoxicity biomarker

In shallow waters surface gravity waves (tides) propagate with a speed proportional to the square root of water depth (c=g(h+η)). As the ratio of free surface displacement to mean depth (η/h) approaches unity the wave will travel noticeably faster at high tide than at low tide, creating asymmetries in the tidal form. This physical process is explained analytically by the increased...

Concentrations and loads of total mercury and methylmercury were measured in streams draining abandoned mercury mines and in the proximity of geothermal discharge in the Cache Creek watershed of California during a 17-month period from January 2000 through May 2001. Rainfall and runoff were lower than long-term averages during the study period. The greatest loading of mercury and...

Chemical contaminants disrupt ecosystems, but specific effects may be under-appreciated when poorly known processes such as uptake mechanisms, uptake via diet, food preferences, and food web dynamics are influential. Here we show that a combination of food web structure and the physiology of trace element accumulation explain why some species in San Francisco Bay are threatened by a...

Dissolved helium and bromide tracers were used to evaluate trapped gas during an infiltration pond experiment. Dissolved helium preferentially partitioned into trapped gas bubbles, or other pore air, because of its low solubility in water. This produced observed helium retardation factors of as much as 12 relative to bromide. Numerical simulations of helium breakthrough with both...

Shallow subembayments respond differently than deep channels to physical forces acting in estuaries. The U.S. Geological Survey measured suspended-sediment concentrations at five locations in Honker Bay, a shallow subembayment of San Francisco Bay, and the adjacent channel to investigate the spatial and temporal differences between deep and shallow estuarine environments. During the...

This study was implemented to determine if western mosquitofish (Gambusia affinis) populations in the Grassland Water District suffer from impaired reproduction because of seleniferous inflows of agricultural drainwater from the Grassland Bypass Project. During June to July 2001, laboratory trials with pregnant female fish collected from two seleniferous treatment sites exposed to...

A new method for frequency analysis of hydrologic time series was developed to facilitate the estimation and reconstruction of individual or groups of frequencies from hydrologic time-series and facilitate the comparison of these isolated time-series components across data types, between different hydrologic settings within a watershed, between watersheds, and across frequencies. While...

The methods used to obtain universal cover coefficient (Kc) values for a non-tidal restored wetland in the Sacramento-San Joaquin river delta, US, during the summer of the year 2002 and to investigate possible differences during changing wind patterns are described. A micrometeorological tower over the wetland was established to quantify actual evapotranspiration (ETa) rates and surface...