Publications

Coral disease is a global problem. Diseases are typically named or described based on macroscopic changes, but broad signs of coral distress such as tissue loss or discoloration are unlikely to be specific to a particular pathogen. For example, there appear to be multiple diseases that manifest the rapid tissue loss that characterizes ‘white plague.’ PhyloChip™ G3 microarrays were used...

The U.S. Geological Survey (USGS) conducts baseline and storm response photography missions to document and understand the changes in vulnerability of the Nation's coasts to extreme storms (Morgan, 2009). On February 7, 2012, the USGS conducted an oblique aerial photographic survey from Pensacola, Fla., to Breton Islands, La., aboard a Piper Navajo Chieftain at an altitude of 500 feet...

The U.S. Geological Survey anchored a sediment trap in the northern Gulf of Mexico beginning in 2008 to collect seasonal time-series data on the flux and assemblage composition of live planktic foraminifers. This report provides an update of the previous time-series data to include results from 2012. Ten species, or varieties, constituted ~92 percent of the 2012 assemblage...

Marine surface waters are being acidified due to uptake of anthropogenic carbon dioxide, resulting in surface ocean areas of undersaturation with respect to carbonate minerals, including aragonite. In the Arctic Ocean, acidification is expected to occur at an accelerated rate with respect to the global oceans, but a paucity of baseline data has limited our understanding of the extent of...

A study was conducted to understand the marine-influenced environments of Mobile Bay, Alabama, by collecting a series of box cores and gravity cores. One gravity core in particular demonstrates a long reference for changing paleoenvironmental parameters in Mobile Bay. Due to lack of abundance of foraminifers and (or) lack of diversity, the benthic foraminiferal data for two of the three...

Use of different approaches for manipulating seawater chemistry during ocean acidification experiments has confounded comparison of results from various experimental studies. Some of these discrepancies have been attributed to whether addition of acid (such as hydrochloric acid, HCl) or carbon dioxide (CO2) gas has been used to adjust carbonate system parameters. Experimental simulations...

Coastal areas are essential to the economic, cultural, and environmental health of the Nation, yet by nature coastal areas are constantly changing due to a variety of events and processes. Extreme storms can cause dramatic changes to our shorelines in a matter of hours, while sea-level rise can profoundly alter coastal environments over decades. These changes can have a devastating...

The U.S. Geological Survey (USGS) mounted a substantial effort in response to Hurricane Sandy including an assessment of the morphological impacts to the beach and dune system at Fire Island, New York. Field surveys of the beach and dunes collected just prior to and after landfall were used to quantify change in several focus areas. In order to quantify morphologic change along the...

Recently, viruses have been recognized as the most numerous entities and the primary drivers of evolution on Earth. Historically, viruses have been mostly ignored in the field of astrobiology due to the view that they are not alive in the classical sense and if encountered would not present risk due to their host-specific nature. What we currently know of viruses is that we are most...

Resource managers need to make decisions to plan for future environmental conditions, particularly sea level rise, in the face of substantial uncertainty. Many interacting processes factor in to the decisions they face. Advances in process models and the quantification of uncertainty have made models a valuable tool for this purpose. Long-simulation runtimes and, often, numerical...

The U.S. Geological Survey anchored a sediment trap in the northern Gulf of Mexico to collect seasonal time-series data on the flux and assemblage composition of live planktic foraminifers. This report provides an update of the previous time-series data to include results from 2011. Ten species, or varieties, constituted ~92 percent of the 2011 assemblage: Globigerinoides ruber (pink and...

Seabed classification is essential to assessing environmental associations and physical status in coral reef ecosystems. At Pulaski Shoal in Dry Tortugas National Park, Florida, nearly continuous underwater-image coverage was acquired in 15.5 hours in 2009 along 70.2 km of transect lines spanning ~0.2 km2. The Along-Track Reef-Imaging System (ATRIS), a boat-based, high-speed, digital...