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Publications

Browse publications authored by our scientists.  Publications available are: USGS-authored journal articles, series reports, book chapters, other government publications, and more. **Disclaimer: The views expressed in Non-USGS publications are those of the author and do not represent the views of the USGS, Department of the Interior, or the U.S. Government.

Filter Total Items: 5022

Approaching the upper boundary of driver-response relationships: Identifying factors using a novel framework integrating quantile regression with interpretable machine learning Approaching the upper boundary of driver-response relationships: Identifying factors using a novel framework integrating quantile regression with interpretable machine learning

The identification of factors that may be forcing ecological observations to approach the upper boundary provides insight into potential mechanisms affecting driver-response relationships, and can help inform ecosystem management, but has rarely been explored. In this study, we propose a novel framework integrating quantile regression with interpretable machine learning. In the first...
Authors
Zhongyao Liang, Yaoyang Xu, Gang Zhao, Wentao Lu, Zhenghui Fu, Shuhang Wang, Tyler Wagner

Density effects on native and non-native trout survival in streams Density effects on native and non-native trout survival in streams

Environmental stressors associated with a changing climate and non-native fish, individually, represent significant threats to native fish conservation. These threats can exacerbate risks to native fishes when conditions interact at the trailing edge of a population's distribution. We collected capture–mark–recapture data for Rio Grande cutthroat trout (RGCT, Oncorhynchus clarkii...
Authors
Brock M. Huntsman, Lauren Flynn, Colleen A. Caldwell, Abigail Lynch, Fitsum Abadi

Spatial modeling of two mosquito vectors of West Nile virus using integrated nested Laplace approximations Spatial modeling of two mosquito vectors of West Nile virus using integrated nested Laplace approximations

The abundance of Culex restuans and Culex pipiens in relation to ecological predictors is poorly understood in regions of the United States where their ranges overlap. It is suspected that these species play different roles in spreading West Nile virus (WNV) in these regions, but few studies have modeled these species separately or accounted for spatial correlation using Bayesian methods...
Authors
Kristin J. Bondo, Diego Montecino-Latorre, Lisa Williams, Matt Helwig, Kenneth Duren, Mike Hutchinson, W. David Walter

Density-habitat relationships of white-tailed deer (Odocoileus virginianus) in Finland Density-habitat relationships of white-tailed deer (Odocoileus virginianus) in Finland

In heterogeneous landscapes, resource selection constitutes a crucial link between landscape and population-level processes such as density. We conducted a non-invasive genetic study of white-tailed deer in southern Finland in 2016 and 2017 using fecal DNA samples to understand factors influencing white-tailed deer density and space use in late summer prior to the hunting season. We...
Authors
Jenni Poutanen, Angela K. Fuller, Jyrki Pusenius, Andy Royle, Mikael Wikström, Jon E Brommer

Influence of camera model and alignment on the performance of paired camera stations Influence of camera model and alignment on the performance of paired camera stations

The probability of obtaining images of target species may vary across camera models or relative position of cameras at survey locations. Alignment of cameras within paired camera stations (hereafter, stations) could affect species detection due to issues with image exposure. We quantified effects of 3 camera models and alignment (staggered, offset by a perpendicular distance of 4.6 m...
Authors
Tim Swearingen, Robert W. Klaver, Charles R. Anderson, Christopher N. Jacques

DNA metabarcoding-based evaluation of the diet of Big Brown Bats (Eptesicus fuscus) in the Mid-Atlantic region DNA metabarcoding-based evaluation of the diet of Big Brown Bats (Eptesicus fuscus) in the Mid-Atlantic region

High-throughput DNA sequencing can generate large genetic datasets in a cost-effective manner. Although the diet of Eptesicus fuscus (Big Brown Bat) has been studied widely in natural and rural systems using visual identification of prey items in feces, our aim was to more completely assess diet using a metabarcoding approach across a wide urban–natural landscape gradient in the mid...
Authors
Sabrina Deeley, Lin Kang, Pawel Michalak, Eric M. Hallerman, W. Mark Ford

Body mass dynamics in wintering mallards (Anas platyrhynchos) in the Lower Mississippi Alluvial Valley Body mass dynamics in wintering mallards (Anas platyrhynchos) in the Lower Mississippi Alluvial Valley

Body mass in overwintering waterfowl is an important fitness attribute as it affects winter survival, timing of spring migration, and subsequent reproductive success. Recent research in Europe and the western United States indicates body mass of mallards (Anas platyrhynchos) has increased from the late 1960s to early 2000s. The underlying mechanism is currently unknown; however...
Authors
John T. Veon, Brett Alexander DeGregorio, Luke W. Naylor, Kenneth J. Reinecke, Brad C. Dabbert, Dean W. Demarest, Kevin M. Hartke, David G. Krementz

Wind-energy development alters pronghorn migration at multiple scales Wind-energy development alters pronghorn migration at multiple scales

Migration is a critical behavioral strategy necessary for population persistence and ecosystem functioning, but migration routes have been increasingly disrupted by anthropogenic activities, including energy development. Wind energy is the world's fastest growing source of electricity and represents an important alternative to hydrocarbon extraction, but its effects on migratory species...
Authors
Megan C. Milligan, Aaron N. Johnston, Jeffery L. Beck, Kaitlyn L. Taylor, Embere Hall, Lee Knox, Teal Cufaude, Cody F. Wallace, Geneva W. Chong, Matthew Kauffman

Territories within groups: The dynamic competition of drift-feeding juvenile Chinook salmon in 3-dimensional space Territories within groups: The dynamic competition of drift-feeding juvenile Chinook salmon in 3-dimensional space

Salmonid populations are often regulated by territorial competition among juveniles for food and space. In the canonical view, salmonid territories are spaced horizontally across the river bottom in a 2-D mosaic. However, some juveniles instead feed in tight, three-dimensional (3-D) social groups. To investigate whether territoriality is possible within such groups, we applied a new...
Authors
Jason R. Neuswanger, Amanda E. Rosenberger, M. S. Wipfli, Nicholas F. Hughes

A comprehensive multi-state conditional occupancy model for evaluating interactions of non-native and native species A comprehensive multi-state conditional occupancy model for evaluating interactions of non-native and native species

A major challenge in ecology is disentangling interactions of non-native, potentially invasive species on native species. Conditional two-species occupancy models examine the effects of dominant species (e.g., non-native) on subordinate species (e.g., native) while considering the possibility that occupancy of one species may affect occupancy and/ or detection of the other. Although...
Authors
Patti J. Wohner, Paul D. Scheerer, Michael H. Meeuwig, James Peterson

Multi-scale effects of land cover, weather, and fire on Columbian sharp-tailed grouse Multi-scale effects of land cover, weather, and fire on Columbian sharp-tailed grouse

Columbian sharp-tailed grouse (Tympanuchus phasianellus columbianus) are endemic to grassland and shrub-steppe ecosystems of western North America, yet their distribution has contracted to
Authors
Bryan S. Stevens, Courtney J. Conway, Jeffrey M. Knetter, Shane B. Roberts, Patrick Donnelly

Aerial application of organic pellets eliminates Lake Trout recruitment from a primary spawning reef in Yellowstone Lake Aerial application of organic pellets eliminates Lake Trout recruitment from a primary spawning reef in Yellowstone Lake

Invasive Lake Trout Salvelinus namaycush in the Yellowstone Lake ecosystem have been gillnetted since 1995 to suppress the population and allow for recovery of native Yellowstone Cutthroat Trout Oncorhynchus clarkii bouvieri. Although gillnetting is effective (Lake Trout population growth rate λ ≤ 0.6 during 2012–2022), the effort only targets free-swimming, age-2 and older Lake Trout...
Authors
Todd M. Koel, Philip D. Doepke, Drew J. MacDonald, Nathan A. Thomas, Cody W. Vender, Hayley C. Glassic, Alex S. Poole, Christopher S. Guy, Alexander V. Zale
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