Publications

Occupancy models are widely used to analyze presence–absence data for a variety of taxa while accounting for observation error (MacKenzie et al. 2002, 2006; Tyre et al. 2003; Royle and Dorazio 2008). Hayes and Monfils (2015) question their use for analyzing avian point count data based on purported violations of model assumptions incurred by avian mobility. Animal mobility is an...

Streambed scour potential was evaluated at 18 river- and stream-spanning bridges in Alaska that have unknown foundation details or a lack of existing scour analysis. All sites were evaluated for stream stability and long-term scour potential. Contraction scour and abutment scour were calculated for 17 bridges, and pier scour was calculated for 7 bridges that had piers. Vertical...

The seismic signatures of calving events, i.e., calving icequakes, offer an opportunity to examine calving variability with greater precision than is available with other methods. Here using observations from Yahtse Glacier, Alaska, we describe methods to detect, locate, and characterize calving icequakes. We combine these icequake records with a coincident, manually generated record of...

Warming in the Arctic has caused the transition from winter to summer to occur weeks earlier over the last half century, yet little is known about whether avian migrants have altered their timing of arrival on breeding areas to match this earlier seasonal transition. Over a 50-yr period, we examined trends in the timing of the first arrival for 16 avian migrant species at the terminus of...

We report here the genome sequence of a circular virus isolated from samples of an Alaskan black-capped chickadee (Poecile atricapillus) gastrointestinal tract. The genome is 2,152 bp in length and is most similar (30 to 44.5% amino acid identity) to the genome sequences of other single-stranded DNA (ssDNA) circular viruses belonging to the gemycircularvirus group.

Fire-induced permafrost degradation is well documented in boreal forests, but the role of fires in initiating thermokarst development in Arctic tundra is less well understood. Here we show that Arctic tundra fires may induce widespread thaw subsidence of permafrost terrain in the first seven years following the disturbance. Quantitative analysis of airborne LiDAR data acquired two and...

Physiological constraints dictate animals’ ability to exploit habitats. For marine mammals, it is important to quantify physiological limits that influence diving and their ability to alter foraging behaviors. We characterized age-specific dive limits of walruses by measuring anaerobic (acid-buffering capacity) and aerobic (myoglobin content) capacities of the muscles that power hind...

The Queen Charlotte fault (QCF) is a dextral transform system located offshore of southeastern Alaska and western Canada, accommodating ∼4.4  cm/yr of relative motion between the Pacific and North American plates. Oblique convergence along the fault increases southward, and how this convergence is accommodated is still debated. Using seismic reflection data, we interpret offshore...

Pacific blue mussels (Mytilus trossulus) are abundant and wide-spread primary consumers in the intertidal zone throughout the Gulf of Alaska (GOA). As a component of the Gulf Watch Alaska monitoring program, they represent a key member of intertidal communities and an important prey resource to a number of nearshore vertebrate predators. Our goal is to understand variation in abundance...

Diet estimation is an important field within quantitative ecology, providing critical insights into many aspects of ecology and community dynamics. Quantitative fatty acid signature analysis (QFASA) is a prominent method of diet estimation, particularly for marine mammal and bird species. Investigators using QFASA commonly use computer simulation to evaluate statistical characteristics...

It is unknown how the current Asian origin highly pathogenic avian influenza H5 viruses arrived, but these viruses are now poised to become endemic in North America. Wild birds harbor these viruses and have dispersed them at regional scales. What is unclear is how the viruses may be moving from the wild bird reservoir into poultry holdings. Active surveillance of live wild birds is...

We compared migration movements and chronology between Northern Pintails (Anas acuta) marked with dorsally mounted satellite transmitters and pintails marked only with tarsus rings. During weekly intervals of spring and autumn migration between their wintering area in Japan and nesting areas in Russia, the mean distance that ringed pintails had migrated was up to 1000 km farther than the...