Publications

This chapter provides a non-technical overview of ‘closed population capture–recapture’ models, a class of well-established models that are widely applied in ecology, such as removal sampling, covariate models, and distance sampling. These methods are regularly adopted for studies of reptiles, in order to estimate abundance from counts of marked individuals while accounting for imperfect...

In this chapter we provide a basic definition of hierarchical models and introduce the two canonical hierarchical models in this book: site occupancy and N-mixture models. The former is a hierarchical extension of logistic regression and the latter is a hierarchical extension of Poisson regression. We introduce basic concepts of probability modeling and statistical inference including...

The U.S. Geological Survey, in cooperation with the Town of Framingham, Massachusetts, has investigated the potential of proposed groundwater withdrawals at the Birch Road well site to affect nearby surface water bodies and wetlands, including Lake Cochituate, the Sudbury River, and the Great Meadows National Wildlife Refuge in east-central Massachusetts. In 2012, the U.S. Geological...

Obtaining calibration data for models depicting conditions during pre-development periods can be challenging as such periods are characteristically data poor. This study presents two examples where simulation of historic water conveyance structures were used to help characterize historic, or pre-modern, conditions in calibration of groundwater flow models. Persian water conveyance...

There is widespread concern regarding the impacts of anthropogenic activities on connectivity among populations of plants and animals, and understanding how contemporary and historical processes shape metapopulation dynamics is crucial for setting appropriate conservation targets. We used genetic data to identify population clusters and quantify gene flow over historical and contemporary...

Rocks with potential for karst formation are found in all 50 states. Damage due to karst subsidence and sinkhole collapse is a natural hazard of national scope. Repair of damage to buildings, highways, and other infrastructure represents a significant national cost. Sparse and incomplete data show that the average cost of karst-related damages in the United States over the last 15 years...

The Phosphoria Formation and related rocks were deposited over an 8.9 m.y. interval beginning approximately 274.0Ma and ending approximately 265.1Ma. The Meade Peak Phosphatic Shale Member was deposited in southeastern Idaho and adjacent Wyoming over 5.4 m.y. from approximately 273.2 to 268.6 Ma. The Retort Phosphatic Shale Member was deposited in southwestern Montana and west-central...

As the most fossiliferous and least deformed succession of unequivocally Laurentian lower Paleozoic strata in Alaska, the Jones Ridge Limestone has provided critical data for numerous stratigraphic studies (e. g. Palmer 1968; Harris et al. 1995; Dumoulin et al. 2002; Dumoulin and Harris 2012) focused on the Cambrian and Ordovician of northwestern North America/northeastern Laurentia...

Performance of compost and biochar amendments for in situ risk mitigation of aged DDT, DDE and dieldrin residues in an old orchard soil was examined. The change in bioavailability of pesticide residues to Lumbricus terrestris L. relative to the unamended control soil was assessed using 4-L soil microcosms with and without plant cover in a 48-day experiment. The use of aged dairy manure...

Explosives used in construction have been implicated as sources of NO3– contamination in groundwater, but direct forensic evidence is limited. Identification of blasting-related NO3– can be complicated by other NO3– sources, including agriculture and wastewater disposal, and by hydrogeologic factors affecting NO3– transport and stability. Here we describe a study that used hydrogeology...

We describe a new approach that couples hydrograph separation with high-frequency nitrate data to quantify time-variable groundwater and runoff loading of nitrate to streams, and the net in-stream fate of nitrate at the watershed-scale. The approach was applied at three sites spanning gradients in watershed size and land use in the Chesapeake Bay watershed. Results indicate that 58-73%...

The conodont species Caenodontus serrulatus Behnken is a rare coniform element first described in 1975 from Guadalupian strata exposed in the Guadalupe and Delaware Mountains of West Texas. Because it is rare, coniform, and occurs long after most coniform elements supposedly disappeared, it has been hauntingly mysterious. Based on new material containing a varied assemblage of coniform...