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Publications

Publications from USGS science centers throughout the Southeast Region.

Filter Total Items: 10380

Low streamflows in Massachusetts: Variability over space and time and relations with climatic and basin variables Low streamflows in Massachusetts: Variability over space and time and relations with climatic and basin variables

Streamflows in Massachusetts have set record lows in recent years despite generally wetter conditions than during the drought of the 1960s, and the reasons for this are not known. To analyse potential drivers of low streamflows in Massachusetts, six low-flow metrics were computed at 107 streamgages. These metrics represent low-flow magnitude, magnitude normalized to median flows, and...
Authors
Catherine A. Chamberlin, Glenn Hodgkins

Mangrove ecosystems: Importance, threats and opportunities for restoration Mangrove ecosystems: Importance, threats and opportunities for restoration

Mangroves are crucial for biodiversity conservation, coastal protection, and supporting local livelihoods. Mangroves may also protect coasts from storms and rising sea levels and can play a major role in climate mitigation. Threats to their health include activities such as infrastructural development, urban encroachment, aquaculture and crop farming, and oil and gas exploration. We...
Authors
Elijah I. Ohimain, Robert Eugene Turner, Beth A. Middleton

Groundwater drought in the United States: Spatial and temporal variability Groundwater drought in the United States: Spatial and temporal variability

Many communities and ecosystems in the United States that are dependent on groundwater are potentially adversely affected by groundwater drought. We computed yearly groundwater-drought metrics and mean groundwater levels at well locations across the conterminous United States (CONUS), using data from wells and remotely sensed and modeled Gravity Recovery and Climate Experiment Drought...
Authors
Glenn Hodgkins, Caelan Simeone, Melissa A. Lombard, Todd Caldwell, John C. Hammond, Michael Wieczorek, Robert W. Dudley

Scenarios and strategies for future-proofing ecosystem management under climatic novelty Scenarios and strategies for future-proofing ecosystem management under climatic novelty

Climate change is driving unprecedented declines in dominant, habitat-forming foundation species across marine and terrestrial ecosystems globally. As climatic novelty becomes the norm, ecosystem reassembly will become increasingly common. Predicting and understanding these transitions, and their implications for future ecosystem functioning, is essential for designing effective forward...
Authors
Lauren T. Toth, Elizabeth T. Borer, Deron E. Burkepile, Joan Dudney, Nathan P. Lemoine, Julianna J. Renzi, Kathryn E.L. Smith, Travis A. Courtney, Sara A. Goeking, William M. Hammond, David L. Hoover, Sandra MacFayden, Michael J. Osland, Joseph E. Townsend, Robert Young Fidler

Measuring storm waves and water levels from a fixed structure with a rapidly deployable oceanographic radar Measuring storm waves and water levels from a fixed structure with a rapidly deployable oceanographic radar

A new oceanographic radar instrument package was developed by the U.S. Geological Survey (USGS) to measure storm waves and water levels in the nearshore, capable of being deployed rapidly and transmitting data in near real-time. To test the performance and accuracy of the sensor, multiple years of data were collected over various hydrodynamic conditions and compared to long-term...
Authors
Jenna A. Brown, Bryce J McClenney, Patrick J. Dickhudt

Hyperspectral retrieval of phytoplankton absorption and community composition from NASA’s PACE-OCI in estuarine–coastal waters using a hybrid framework combining mixture-of-experts and Variational Autoencoder Hyperspectral retrieval of phytoplankton absorption and community composition from NASA’s PACE-OCI in estuarine–coastal waters using a hybrid framework combining mixture-of-experts and Variational Autoencoder

Retrieving the phytoplankton absorption coefficient (aphy; m−1), one of the most spectrally rich inherent optical properties, remains challenging in optically complex coastal waters worldwide. Leveraging NASA's new hyperspectral mission, PACE, we introduce Hyper-MoE-VAE, a deep-learning architecture that integrates a Mixture-of-Experts with a Variational Autoencoder to retrieve high...
Authors
Xingyu Bai, Bingqing Liu, Jiang Li, Yuanheng Xiong, Eurico J. D'Sa, Melissa Millman Baustian, Xiaodong Zhang, Brice K. Grunert, Chisom O. Emeghiebo, Cassie Glasspie, Xu Yuan

Short-term estuarine phytoplankton dynamics in response to hurricanes along the Gulf Coast of America: A Variational Autoencoder (VAE) approach with satellite and bio-optical observations Short-term estuarine phytoplankton dynamics in response to hurricanes along the Gulf Coast of America: A Variational Autoencoder (VAE) approach with satellite and bio-optical observations

Hurricanes drive diverse estuarine phytoplankton responses and can trigger cascading ecological and physicochemical impacts. Capturing these short-term dynamics requires high spatiotemporal resolution. Here, we applied a globally-applicable coastal ocean color algorithm, Variational Autoencoder (VAE), to Sentinel-2 MSI imagery for chlorophyll-a (Chl-a) estimation and validated its strong
Authors
Jiang Li, Bingqing Liu, Jiadong Lou, Xu Yuan, Eurico J. D'Sa, Melissa Millman Baustian, Megan La Peyre, Angelina Freeman, Vitor S. Martins, Emad Habib

Erosion potential and flood vulnerability of streams and stream crossings at Acadia National Park, Maine Erosion potential and flood vulnerability of streams and stream crossings at Acadia National Park, Maine

Acadia National Park has had increases in the frequency and magnitude of precipitation in recent years, leading to increased flood flows, stream erosion, and costly infrastructure damage. To improve infrastructure management in a changing climate, the U.S. Geological Survey, in cooperation with the National Park Service, has developed multiple datasets that can help natural resource...
Authors
Ian P. Armstrong, Meghan A. McCallister, Kristina M. Hyslop, Adam J. Benthem

A tool to monitor hydrologic conditions on tree islands in the Everglades A tool to monitor hydrologic conditions on tree islands in the Everglades

Tree islands are patchy upland forested habitats in Florida's Everglades that face degradation and disappearance due to altered hydrologic patterns. The U.S. Geological Survey coordinated with the Miccosukee Tribe of Indians of Florida and the Seminole Tribe of Florida to co-develop a decision-support tool based on tree-island hydrologic conditions. Everglades managers can use this tool...
Authors
Saira M. Haider, Craig van der Heiden, Marcel Bozas, Stephanie S. Romañach

Chronic exposure to waterborne nickel significantly reduced growth of juvenile crayfish (Faxonius virilis) Chronic exposure to waterborne nickel significantly reduced growth of juvenile crayfish (Faxonius virilis)

Crayfish are critical functional components of aquatic ecosystems. Previous research has documented adverse effects of mineral extraction on crayfish. Here, we characterize potential risks of mining-derived waterborne nickel (Ni) to crayfish by documenting the effects of dissolved Ni on growth and food consumption of juvenile virile crayfish (Faxonius virilis) in a 28-day chronic...
Authors
Adrian Parr Moore, Mark L. Wildhaber, Zachary D Beaman, Kendell Ray Bennett, Karlie K Ditter, Danielle M. Cleveland, J. Blanton, Tyler J. Grant

Future aquatic invaders of the Northeast U.S.: How climate change, human vectors, and natural history could bring southern and western species north Future aquatic invaders of the Northeast U.S.: How climate change, human vectors, and natural history could bring southern and western species north

As environmental conditions change, land managers are increasingly concerned about the potential for new aquatic invasive species to move into their jurisdictions. Because managers may have limited resources, detecting invasive species early is important as prevention is more effective and less costly than ongoing mitigation of established populations. Tools built to assist early...
Authors
Catherine S. Jarnevich, Peder Engelstad, Shelby K. LeClare, Richard D. Inman, Ian A. Pfingsten, Wesley M. Daniel

Assessment of antibiotic resistance genes in Caribbean corals, including those treated with amoxicillin Assessment of antibiotic resistance genes in Caribbean corals, including those treated with amoxicillin

The decimation of reefs from stony coral tissue loss disease prompted the use of a topical amoxicillin treatment to prevent coral mortality. Application of this treatment led to concerns about unintentional impacts such as potential alteration of the coral microbiome and possible spread of antibiotic resistance. We used three different methodologies—microbial RNA sequencing, 16S rRNA...
Authors
Karen L. Neely, Christina A. Kellogg, Julie Jenice Voelschow, Allison R. Cauvin, Sydney A.M. Reed, Ewelina Rubin, Julie L. Meyer
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