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Publications

Publications from USGS science centers throughout the Southeast Region.

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Co-occurrence of invasive Cuban Treefrogs and native treefrogs in PVC pipe refugia Co-occurrence of invasive Cuban Treefrogs and native treefrogs in PVC pipe refugia

The Cuban Treefrog (Osteopilus septentrionalis) was first introduced to Florida at Key West. Since this introduction, Cuban Treefrogs have spread to Miami and are now established throughout most of peninsular Florida. Cuban Treefrogs can become very abundant in areas they colonize. Several reasons contribute to their success, including a generalist diet, high fecundity and the ability to...
Authors
Laura M. Elston, J. Hardin Waddle, Kenneth G. Rice, H. Franklin Percival

Comparing bacterial community composition between healthy and white plague-like disease states in Orbicella annularis using PhyloChip™ G3 microarrays Comparing bacterial community composition between healthy and white plague-like disease states in Orbicella annularis using PhyloChip™ G3 microarrays

Coral disease is a global problem. Diseases are typically named or described based on macroscopic changes, but broad signs of coral distress such as tissue loss or discoloration are unlikely to be specific to a particular pathogen. For example, there appear to be multiple diseases that manifest the rapid tissue loss that characterizes ‘white plague.’ PhyloChip™ G3 microarrays were used...
Authors
Christina A. Kellogg, Yvette M. Piceno, Lauren M. Tom, Todd Z. DeSantis, Michael A. Gray, David G. Zawada, Gary L. Andersen

Improving sediment-quality guidelines for nickel: development and application of predictive bioavailability models to assess chronic toxicity of nickel in freshwater sediments Improving sediment-quality guidelines for nickel: development and application of predictive bioavailability models to assess chronic toxicity of nickel in freshwater sediments

Within the framework of European Union chemical legislations an extensive data set on the chronic toxicity of sediment nickel has been generated. In the initial phase of testing, tests were conducted with 8 taxa of benthic invertebrates in 2 nickel-spiked sediments, including 1 reasonable worst-case sediment with low concentrations of acid-volatile sulfide (AVS) and total organic carbon...
Authors
Marnix L. U. Vangheluwe, Frederik A. M. Verdonck, John M. Besser, William G. Brumbaugh, Christopher G. Ingersoll, Christan E. Schlekat, Emily Rogevich Garman

Baseline coastal oblique aerial photographs collected from Pensacola, Florida, to Breton Islands, Louisiana, February 7, 2012 Baseline coastal oblique aerial photographs collected from Pensacola, Florida, to Breton Islands, Louisiana, February 7, 2012

The U.S. Geological Survey (USGS) conducts baseline and storm response photography missions to document and understand the changes in vulnerability of the Nation's coasts to extreme storms (Morgan, 2009). On February 7, 2012, the USGS conducted an oblique aerial photographic survey from Pensacola, Fla., to Breton Islands, La., aboard a Piper Navajo Chieftain at an altitude of 500 feet...
Authors
Karen L.M. Morgan, M. Dennis Krohn, Kara Doran, Kristy K. Guy

Improving regression-model-based streamwater constituent load estimates derived from serially correlated data Improving regression-model-based streamwater constituent load estimates derived from serially correlated data

A regression-model based approach is a commonly used, efficient method for estimating streamwater constituent load when there is a relationship between streamwater constituent concentration and continuous variables such as streamwater discharge, season and time. A subsetting experiment using a 30-year dataset of daily suspended sediment observations from the Mississippi River at Thebes...
Authors
Brent T. Aulenbach

Direct and indirect effects of land use on floral resources and flower-visiting insects across an urban landscape Direct and indirect effects of land use on floral resources and flower-visiting insects across an urban landscape

Although urban areas are often considered to have uniformly negative effects on biodiversity, cities are most accurately characterized as heterogeneous mosaics of buildings, streets, parks, and gardens that include both ‘good’ and ‘bad’ areas for wildlife. However, to date, few studies have evaluated how human impacts vary in direction and magnitude across a heterogeneous urban landscape...
Authors
K.C. Matteson, James B. Grace, E.S. Minor

Aquatic ecosystems as indicators of status and trends in water quality Aquatic ecosystems as indicators of status and trends in water quality

This chapter provides an introduction and overview of the use of aquatic ecosystems as indicators of water quality. The monitoring of biological communities (fish, algae, and invertebrates) as a means of assessing water quality conditions is emphasized along with ecotoxicological studies and measures of ecosystem function. Issues related to the design, implementation, and analysis of...
Authors
Thomas F. Cuffney, Jonathan G. Kennen, Ian R. Waite

Bayes and empirical Bayes estimators of abundance and density from spatial capture-recapture data Bayes and empirical Bayes estimators of abundance and density from spatial capture-recapture data

In capture-recapture and mark-resight surveys, movements of individuals both within and between sampling periods can alter the susceptibility of individuals to detection over the region of sampling. In these circumstances spatially explicit capture-recapture (SECR) models, which incorporate the observed locations of individuals, allow population density and abundance to be estimated...
Authors
Robert M. Dorazio

Historical records, sources, and spatial trends of PCBs along the Rhône River (France). Historical records, sources, and spatial trends of PCBs along the Rhône River (France).

Despite bans on PCB use since 1975 (open systems) and 1987 (closed systems), concentrations of PCBs in riverine fish in France continue to exceed regulatory levels. We present historical records of PCB concentrations in sediment cores from eight sites on the Rhône River, from Lake Geneva to the Mediterranean Sea. Maximum PCB concentrations (sum of seven indicator PCBs) increase...
Authors
Brice Mourier, Marc Desmet, Peter C. Van Metre, Barbara Mahler, Yves Perrodin, Gwenaelle Roux, Jean-Phillippe Bedell, Lynn W. Lefebvre, Marc Babut

Distribution of extant populations of Quadrula mitchelli (false spike) Distribution of extant populations of Quadrula mitchelli (false spike)

The False Spike, Quadrula mitchelli (Simpson 1896), is a rare species of mussel endemic to Central Texas and the Rio Grande drainage (Howells 2010). This species was thought to have been extinct until the discovery of several live individuals in the Guadalupe River and a fresh dead individual in the San Saba River in 2011 (Randklev et al. 2012; Randklev et al. in press). Since then, this...
Authors
Charles R. Randklev, Eric Tsakiris, Robert G. Howells, Julie Groce, Matthew S. Johnson, Joseph Bergmann, Clint Robertson, Andy Blair, Brad Littrell, Nathan Johnson

Temporal, spatial, and body size effects on growth rates of loggerhead sea turtles (Caretta caretta) in the Northwest Atlantic Temporal, spatial, and body size effects on growth rates of loggerhead sea turtles (Caretta caretta) in the Northwest Atlantic

In response to a call from the US National Research Council for research programs to combine their data to improve sea turtle population assessments, we analyzed somatic growth data for Northwest Atlantic (NWA) loggerhead sea turtles (Caretta caretta) from 10 research programs. We assessed growth dynamics over wide ranges of geography (9–33°N latitude), time (1978–2012), and body size...
Authors
Karen A. Bjorndal, Barbara A. Schroeder, Allen M. Foley, Blair E. Witherington, Michael Bresette, David Clark, Richard M. Herren, Michael D. Arendt, Jeffrey R. Schmid, Anne B. Meylan, Peter A. Meylan, Jane A. Provancha, Kristen M. Hart, Margaret M. Lamont, Raymond R. Carthy, Alan B. Bolten

Usefulness of hemocytometer as a counting chamber in a computer assisted sperm analyzer (CASA) Usefulness of hemocytometer as a counting chamber in a computer assisted sperm analyzer (CASA)

Several methods are used to determine sperm cell concentration, such as the haemocytometer, spectrophotometer, electronic cell counter and computer-assisted semen analysers (CASA). The utility of CASA systems has been limited due to the lack of characterization of individual systems and the absence of standardization among laboratories. The aims of this study were to: 1) validate and...
Authors
A. Eljarah, J. Chandler, J.A. Jenkins, J. Chenevert, A. Alcanal
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