Aaron Cupp
Aaron is a Supervisory Biologist (Branch Chief) for the Aquatic Ecosystem Health Branch at the USGS-Upper Midwest Environmental Sciences Center in La Crosse, Wisconsin.
Science and Products
Registration of Carbon Dioxide–Carp
Registration of new fishery chemicals is critical for resource managers to incorporate chemical controls as part of their Integrated Pest Management plans. In 2019, the U.S. Geological Survey (USGS) and U.S. Fish and Wildlife Service (USFWS) obtained a Section 3 registration from the U.S. Environmental Protection Agency for carbon dioxide (CO2) as a new pesticide under the name Carbon Dioxide–Carp...
Invasive Carp Control: Carbon Dioxide
Invasive carps (silver, bighead, black, grass) cause considerable economic and ecological damage to important fishery and water resources in the United States. Carbon dioxide (CO2) applied into water is being developed as a new chemical method to control invasive carps and other aquatic invasive species. Ongoing studies are evaluating the effectiveness of CO2 as a behavioral deterrent to limit...
Effects of Carbon Dioxide on Non-Target Organisms
Chemical controls are a vital component of many effective Integrated Pest Management plans. Carbon dioxide (CO2) is being evaluated as a new fishery chemical for invasive carps as a general toxicant or behavioral deterrent. Administration of non-selective chemicals, such as CO2, into public waters could pose a risk to non-target organisms (e.g. native mussels, native fishes) through direct or...
Carbon Dioxide for General Aquatic Invasive Species Control
Carbon dioxide (CO2) is being evaluated as a new fishery chemical for general aquatic invasive species control. Most research has focused on its effectiveness as a behavioral deterrent and lethal control or invasive carps. However, because CO2 is generally non-selective, there is potential for this new control chemical to be applied across a wide range of aquatic invasive species challenges.
Carbon Dioxide as an Invasive Carp Lethal Control
Management agencies often rely on commercial harvest for invasive carp population control. Piscicides, or fish toxicants, are an alternative method that could supplement Integrated Pest Management plans to kill and remove large quantities of invasive carps in a relatively short period of time. This non-selective removal strategy could greatly improve removal efficiency, particularly where high...
Engineering and Testing of Carbon Dioxide Infusion Systems
Management agencies have identified key pinch-points where there is a need to block invasive carp passage. Recent studies have shown that carbon dioxide (CO2) can be an effective behavioral deterrent for invasive carps and could be used independently or in combination with other deterrents to reduce the risk of migration into new areas. Installation of a deterrent at these management locations...
Anesthetic properties of carbon dioxide on native and invasive fishes Anesthetic properties of carbon dioxide on native and invasive fishes
This study evaluated the anesthetic properties of dissolved carbon dioxide on six fish species to determine its efficacy for use in sedating wild caught fish for surgeries. Phase I of this study aimed to inform induction time, recovery time, and short-term survival of fish using five different concentrations of carbon dioxide at one water temperature. Phase II determined the induction...
Acute Toxicity of Carbon Dioxide to Crayfish Acute Toxicity of Carbon Dioxide to Crayfish
This study evaluated the use of dissolved carbon dioxide as a control method for invasive crayfish. Five concentrations of CO2 were administered to twenty-four test tanks at a water temperature of 5°C. Initially, Red Swamp Crayfish (RSC; Procambarus clarkii) were intended to be the test species used in the study. However, problems with obtaining a healthy population of RSC occurred, so...
Trial data for Field Effectiveness of florfenicol and oxytetracycline dihydrate in Controlling Mortality in Walleye (Sander vitreus) due to Motile Aeromonad Infections Trial data for Field Effectiveness of florfenicol and oxytetracycline dihydrate in Controlling Mortality in Walleye (Sander vitreus) due to Motile Aeromonad Infections
This is the mortality and water quality data for 2 efficacy trials of medicated feed for controlling mortality in Walleye (Sander vitreus) due to motile aeromonad infections. Top-coated feed with florfenicol or oxytetracycline or control feed were administered in both trials to fingerling walleye. Daily mortality counts and water quality measurements for dissolved oxygen, pH, temperature...
Data release for an experimental translocation of invasive bigheaded carps and upstream passage success at a navigation lock Data release for an experimental translocation of invasive bigheaded carps and upstream passage success at a navigation lock
This dataset accompanies the article 'Upstream experience and experimental translocation of invasive bigheaded carps results in increased upstream passage success at a navigation lock in a large river'. The data come from the experimental capture and tagging of invasive bigheaded carp with acoustic transmitters and physically moving some groups farther downstream. These transmitters emit...
Acoustic Telemetry Evaluation of Invasive Red Swamp Crayfish (Procambarus clarkii) Behavior in Southern Michigan (Summer 2021) Acoustic Telemetry Evaluation of Invasive Red Swamp Crayfish (Procambarus clarkii) Behavior in Southern Michigan (Summer 2021)
This study deployed acoustic telemetry into a red swamp crayfish-infested water retention pond (1.0 ac) near Novi, Michigan to document the movements and behavior of telemetered red swamp crayfish (Procambarus clarkii). Telemetry was setup in the pond for approximately 3 months. Spreadsheets include telemetry data with position estimates for individual crayfish.
Acoustic Telemetry Evaluation of Invasive Carp in Kaukauna, Wisconsin (Summer 2019) Acoustic Telemetry Evaluation of Invasive Carp in Kaukauna, Wisconsin (Summer 2019)
This study deployed acoustic telemetry at the Fox River Navigational System Authority (FRNSA) in lock #2 and the upstream and downstream pools in Kaukauna, WI to document movements and behavior of telemetered fish species in response to injection of carbon dioxide. Telemetry equipment was setup in the test area for approximately 2 months during the summer of 2019. CSV metadata includes...
Filter Total Items: 40
Movement patterns of invasive red swamp crayfish vary with sex and environmental factors Movement patterns of invasive red swamp crayfish vary with sex and environmental factors
Invasive species disproportionately invade freshwater ecosystems, threatening biodiversity. Defining when, where, and why aquatic invasive species move can help inform management strategies, yet the movement ecology of some of the most pervasive invasive species remains unknown. Red swamp crayfish (Procambarus clarkii; RSC) are the most widespread invasive crayfish and negatively affect...
Authors
Maggie Jo Raboin, Brian M. Roth, Aaron Sullivan, Ann L. Allert, Jim A. Stoeckel, Lucas R. Nathan, Kathleen B. Quebedeaux, Matthew D. Sholtis, Justin R. Smerud, Richard A. Erickson, Aaron R. Cupp
Evaluation of a carbon dioxide fish barrier through numerical modelling Evaluation of a carbon dioxide fish barrier through numerical modelling
The Chicago Area Waterway System (CAWS) is a potential route for the migration of aquatic invasive species from the Mississippi River Basin into the Great Lakes. Electric dispersal barriers were installed in the Chicago Sanitary Ship Canal, within CAWS, to prevent invasive fish from reaching the Great Lakes. Despite the high efficiency of these barriers, occasional maintenance events...
Authors
Marcela Politano, Aaron R. Cupp, David Smith, Avery Schemmel, P. Ryan Jackson, Jeff Zuercher
Silver carp experience metabolic and behavioral changes when exposed to water from the Chicago Area Waterway Silver carp experience metabolic and behavioral changes when exposed to water from the Chicago Area Waterway
One of the hallmarks of invasive species is their propensity to spread. Removing an invasive species after establishment is virtually impossible, and so considerable effort is invested in preventing the range expansion of invaders. Silver carp (Hypophthalmichthys molitrix) were discovered in the Mississippi River in 1981 and have spread throughout the basin. Despite their propensity to...
Authors
Amy E. Schneider, Andrew J. Esbaugh, Aaron R. Cupp, C.D. Suski
Multi-scale effects of behavioral movement deterrents on invasive carp metapopulations Multi-scale effects of behavioral movement deterrents on invasive carp metapopulations
Behavioral deterrents of among-pool movement represent a promising tool for controlling invasive fish populations. To date, much of the research in this area has been focused on the direct effectiveness of different methods of deterrence. However, the effect of these structures on populations in spatially complex habitats is unknown. We combine a metacommunity model with movement data of...
Authors
Donald R. Schoolmaster, Aaron R. Cupp, Alison A. Coulter, Richard A. Erickson
Summary of data collected during field efficacy trials of florfenicol and oxytetracycline dihydrate in controlling mortality in walleye (Sander vitreus) because of motile Aeromonad infections Summary of data collected during field efficacy trials of florfenicol and oxytetracycline dihydrate in controlling mortality in walleye (Sander vitreus) because of motile Aeromonad infections
Motile Aeromonad septicemia is a substantial concern during fish propagation and can be catastrophic for fish hatcheries. We tested the efficacy of two different drugs (florfenicol and oxytetracycline) offered with feed as possible treatment options to control mortality because of motile Aeromonad infection. We offered top-coated medicated feeds to hatchery-reared Sander vitreus (walleye...
Authors
Christopher M. Merkes, Maren T. Tuttle-Lau, Susan M. Schleis, Aaron R. Cupp
Upstream experience and experimental translocation of invasive bigheaded carps results in increased upstream passage success at a navigation lock in a large river Upstream experience and experimental translocation of invasive bigheaded carps results in increased upstream passage success at a navigation lock in a large river
Fish movements in regulated rivers can be challenging to study because anthropogenic modifications, such as locks and dams, can influence animal behavior. Upper Mississippi River Lock and Dam 19 (LD 19), for example, is an invasive carp movement bottleneck due to an impassable dam. Upstream fish passage at LD19 is restricted to the lock chamber, making it an optimal location to test...
Authors
Andrea K. Fritts, Daniel Gibson-Reinemer, Brent Knights, Amanda S. Milde, Jessica C. Stanton, Marybeth K. Brey, Douglas Appel, Aaron R. Cupp, Sarah Tripp, James T. Lamer, Mark W. Fritts
Application of MetaIPM to the Upper Mississippi River for Fish Passage including Graphical User Interfaces Application of MetaIPM to the Upper Mississippi River for Fish Passage including Graphical User Interfaces
This repository contains applications of the Metapopulation Integral PRojection Model (MetaIPM; https://doi.org/10.5066/P9427H6M), which is a Python package that uses a integral projection model (IPM) to model meta-population dynamics and continuous growth rates of species living in spatially discrete habitat units. In this particular implementation, we use MetaIPM to model invasive...
Coregonid Coregonid
This repository contains code for the analysis from a study that examined mortality and qPCR detection in 4 groups of fish: an uninfected control group, an infected control group, and two treatment groups. The main goals were to determine if their were differences in mortality and qPCR detection of the parasite among the differing groups. Mortality was addressed using a Generalized...
Science and Products
Registration of Carbon Dioxide–Carp
Registration of new fishery chemicals is critical for resource managers to incorporate chemical controls as part of their Integrated Pest Management plans. In 2019, the U.S. Geological Survey (USGS) and U.S. Fish and Wildlife Service (USFWS) obtained a Section 3 registration from the U.S. Environmental Protection Agency for carbon dioxide (CO2) as a new pesticide under the name Carbon Dioxide–Carp...
Invasive Carp Control: Carbon Dioxide
Invasive carps (silver, bighead, black, grass) cause considerable economic and ecological damage to important fishery and water resources in the United States. Carbon dioxide (CO2) applied into water is being developed as a new chemical method to control invasive carps and other aquatic invasive species. Ongoing studies are evaluating the effectiveness of CO2 as a behavioral deterrent to limit...
Effects of Carbon Dioxide on Non-Target Organisms
Chemical controls are a vital component of many effective Integrated Pest Management plans. Carbon dioxide (CO2) is being evaluated as a new fishery chemical for invasive carps as a general toxicant or behavioral deterrent. Administration of non-selective chemicals, such as CO2, into public waters could pose a risk to non-target organisms (e.g. native mussels, native fishes) through direct or...
Carbon Dioxide for General Aquatic Invasive Species Control
Carbon dioxide (CO2) is being evaluated as a new fishery chemical for general aquatic invasive species control. Most research has focused on its effectiveness as a behavioral deterrent and lethal control or invasive carps. However, because CO2 is generally non-selective, there is potential for this new control chemical to be applied across a wide range of aquatic invasive species challenges.
Carbon Dioxide as an Invasive Carp Lethal Control
Management agencies often rely on commercial harvest for invasive carp population control. Piscicides, or fish toxicants, are an alternative method that could supplement Integrated Pest Management plans to kill and remove large quantities of invasive carps in a relatively short period of time. This non-selective removal strategy could greatly improve removal efficiency, particularly where high...
Engineering and Testing of Carbon Dioxide Infusion Systems
Management agencies have identified key pinch-points where there is a need to block invasive carp passage. Recent studies have shown that carbon dioxide (CO2) can be an effective behavioral deterrent for invasive carps and could be used independently or in combination with other deterrents to reduce the risk of migration into new areas. Installation of a deterrent at these management locations...
Anesthetic properties of carbon dioxide on native and invasive fishes Anesthetic properties of carbon dioxide on native and invasive fishes
This study evaluated the anesthetic properties of dissolved carbon dioxide on six fish species to determine its efficacy for use in sedating wild caught fish for surgeries. Phase I of this study aimed to inform induction time, recovery time, and short-term survival of fish using five different concentrations of carbon dioxide at one water temperature. Phase II determined the induction...
Acute Toxicity of Carbon Dioxide to Crayfish Acute Toxicity of Carbon Dioxide to Crayfish
This study evaluated the use of dissolved carbon dioxide as a control method for invasive crayfish. Five concentrations of CO2 were administered to twenty-four test tanks at a water temperature of 5°C. Initially, Red Swamp Crayfish (RSC; Procambarus clarkii) were intended to be the test species used in the study. However, problems with obtaining a healthy population of RSC occurred, so...
Trial data for Field Effectiveness of florfenicol and oxytetracycline dihydrate in Controlling Mortality in Walleye (Sander vitreus) due to Motile Aeromonad Infections Trial data for Field Effectiveness of florfenicol and oxytetracycline dihydrate in Controlling Mortality in Walleye (Sander vitreus) due to Motile Aeromonad Infections
This is the mortality and water quality data for 2 efficacy trials of medicated feed for controlling mortality in Walleye (Sander vitreus) due to motile aeromonad infections. Top-coated feed with florfenicol or oxytetracycline or control feed were administered in both trials to fingerling walleye. Daily mortality counts and water quality measurements for dissolved oxygen, pH, temperature...
Data release for an experimental translocation of invasive bigheaded carps and upstream passage success at a navigation lock Data release for an experimental translocation of invasive bigheaded carps and upstream passage success at a navigation lock
This dataset accompanies the article 'Upstream experience and experimental translocation of invasive bigheaded carps results in increased upstream passage success at a navigation lock in a large river'. The data come from the experimental capture and tagging of invasive bigheaded carp with acoustic transmitters and physically moving some groups farther downstream. These transmitters emit...
Acoustic Telemetry Evaluation of Invasive Red Swamp Crayfish (Procambarus clarkii) Behavior in Southern Michigan (Summer 2021) Acoustic Telemetry Evaluation of Invasive Red Swamp Crayfish (Procambarus clarkii) Behavior in Southern Michigan (Summer 2021)
This study deployed acoustic telemetry into a red swamp crayfish-infested water retention pond (1.0 ac) near Novi, Michigan to document the movements and behavior of telemetered red swamp crayfish (Procambarus clarkii). Telemetry was setup in the pond for approximately 3 months. Spreadsheets include telemetry data with position estimates for individual crayfish.
Acoustic Telemetry Evaluation of Invasive Carp in Kaukauna, Wisconsin (Summer 2019) Acoustic Telemetry Evaluation of Invasive Carp in Kaukauna, Wisconsin (Summer 2019)
This study deployed acoustic telemetry at the Fox River Navigational System Authority (FRNSA) in lock #2 and the upstream and downstream pools in Kaukauna, WI to document movements and behavior of telemetered fish species in response to injection of carbon dioxide. Telemetry equipment was setup in the test area for approximately 2 months during the summer of 2019. CSV metadata includes...
Filter Total Items: 40
Movement patterns of invasive red swamp crayfish vary with sex and environmental factors Movement patterns of invasive red swamp crayfish vary with sex and environmental factors
Invasive species disproportionately invade freshwater ecosystems, threatening biodiversity. Defining when, where, and why aquatic invasive species move can help inform management strategies, yet the movement ecology of some of the most pervasive invasive species remains unknown. Red swamp crayfish (Procambarus clarkii; RSC) are the most widespread invasive crayfish and negatively affect...
Authors
Maggie Jo Raboin, Brian M. Roth, Aaron Sullivan, Ann L. Allert, Jim A. Stoeckel, Lucas R. Nathan, Kathleen B. Quebedeaux, Matthew D. Sholtis, Justin R. Smerud, Richard A. Erickson, Aaron R. Cupp
Evaluation of a carbon dioxide fish barrier through numerical modelling Evaluation of a carbon dioxide fish barrier through numerical modelling
The Chicago Area Waterway System (CAWS) is a potential route for the migration of aquatic invasive species from the Mississippi River Basin into the Great Lakes. Electric dispersal barriers were installed in the Chicago Sanitary Ship Canal, within CAWS, to prevent invasive fish from reaching the Great Lakes. Despite the high efficiency of these barriers, occasional maintenance events...
Authors
Marcela Politano, Aaron R. Cupp, David Smith, Avery Schemmel, P. Ryan Jackson, Jeff Zuercher
Silver carp experience metabolic and behavioral changes when exposed to water from the Chicago Area Waterway Silver carp experience metabolic and behavioral changes when exposed to water from the Chicago Area Waterway
One of the hallmarks of invasive species is their propensity to spread. Removing an invasive species after establishment is virtually impossible, and so considerable effort is invested in preventing the range expansion of invaders. Silver carp (Hypophthalmichthys molitrix) were discovered in the Mississippi River in 1981 and have spread throughout the basin. Despite their propensity to...
Authors
Amy E. Schneider, Andrew J. Esbaugh, Aaron R. Cupp, C.D. Suski
Multi-scale effects of behavioral movement deterrents on invasive carp metapopulations Multi-scale effects of behavioral movement deterrents on invasive carp metapopulations
Behavioral deterrents of among-pool movement represent a promising tool for controlling invasive fish populations. To date, much of the research in this area has been focused on the direct effectiveness of different methods of deterrence. However, the effect of these structures on populations in spatially complex habitats is unknown. We combine a metacommunity model with movement data of...
Authors
Donald R. Schoolmaster, Aaron R. Cupp, Alison A. Coulter, Richard A. Erickson
Summary of data collected during field efficacy trials of florfenicol and oxytetracycline dihydrate in controlling mortality in walleye (Sander vitreus) because of motile Aeromonad infections Summary of data collected during field efficacy trials of florfenicol and oxytetracycline dihydrate in controlling mortality in walleye (Sander vitreus) because of motile Aeromonad infections
Motile Aeromonad septicemia is a substantial concern during fish propagation and can be catastrophic for fish hatcheries. We tested the efficacy of two different drugs (florfenicol and oxytetracycline) offered with feed as possible treatment options to control mortality because of motile Aeromonad infection. We offered top-coated medicated feeds to hatchery-reared Sander vitreus (walleye...
Authors
Christopher M. Merkes, Maren T. Tuttle-Lau, Susan M. Schleis, Aaron R. Cupp
Upstream experience and experimental translocation of invasive bigheaded carps results in increased upstream passage success at a navigation lock in a large river Upstream experience and experimental translocation of invasive bigheaded carps results in increased upstream passage success at a navigation lock in a large river
Fish movements in regulated rivers can be challenging to study because anthropogenic modifications, such as locks and dams, can influence animal behavior. Upper Mississippi River Lock and Dam 19 (LD 19), for example, is an invasive carp movement bottleneck due to an impassable dam. Upstream fish passage at LD19 is restricted to the lock chamber, making it an optimal location to test...
Authors
Andrea K. Fritts, Daniel Gibson-Reinemer, Brent Knights, Amanda S. Milde, Jessica C. Stanton, Marybeth K. Brey, Douglas Appel, Aaron R. Cupp, Sarah Tripp, James T. Lamer, Mark W. Fritts
Application of MetaIPM to the Upper Mississippi River for Fish Passage including Graphical User Interfaces Application of MetaIPM to the Upper Mississippi River for Fish Passage including Graphical User Interfaces
This repository contains applications of the Metapopulation Integral PRojection Model (MetaIPM; https://doi.org/10.5066/P9427H6M), which is a Python package that uses a integral projection model (IPM) to model meta-population dynamics and continuous growth rates of species living in spatially discrete habitat units. In this particular implementation, we use MetaIPM to model invasive...
Coregonid Coregonid
This repository contains code for the analysis from a study that examined mortality and qPCR detection in 4 groups of fish: an uninfected control group, an infected control group, and two treatment groups. The main goals were to determine if their were differences in mortality and qPCR detection of the parasite among the differing groups. Mortality was addressed using a Generalized...