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Collin Eagles-Smith

I am a Research Ecologist with the USGS Forest and Rangeland Ecosystem Science Center in Corvallis, Oregon. My research focuses on the interactions among ecological processes, contaminant bioaccumulation, and effects on wild populations. 

My work specifically focuses on (1) the ecological factors regulating contaminant bioaccumulation and trophic transfer, with an emphasis on food web processes and contaminant cycling, (2) land use practices and ecosystem restoration effects on contaminant cycling through food webs, and (3) the sublethal effects of contaminants on individuals and contaminant-induced impairment to reproduction in the wild. My research is broadly applied across taxa - primarily fish and waterbirds, and habitat types - including lakes, freshwater wetlands, agricultural fields, and estuarine habitats. 

Professional Experience

  • 2010-present: Supervisory Research Ecologist, USGS Forest and Rangeland Ecosystem Science Center, Corvallis, OR

  • 2007-2010: Wildlife Biologist, USGS Western Ecological Research Center, Davis, CA

  • 2003-2007: Biologist, U.S. Fish and Wildlife Service, Sacramento, CA

Education and Certifications

  • Ph.D., Ecology, University of California, Davis, CA (2006)

  • B.S., Environmental Resource Sciences - Magna Cum Laude, University of California, Davis, CA (2000)

Science and Products

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Contaminant Ecology Research Team (FRESC)

The FRESC Contaminant Ecology research program evaluates the distribution, movement, and ecological effects of environmental contaminants across the landscape and strives to provide relevant science in support of natural resource conservation, management, and decision making.
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Forest and Rangeland Ecosystem Science Center
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Contaminant Ecology Research Team (FRESC)

The FRESC Contaminant Ecology research program evaluates the distribution, movement, and ecological effects of environmental contaminants across the landscape and strives to provide relevant science in support of natural resource conservation, management, and decision making.
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If you are unable to access or download a product, email fresc_outreach@usgs.gov a request, including the full citation, or call (541) 750-1030.

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If you are unable to access or download a product, email fresc_outreach@usgs.gov a request, including the full citation, or call (541) 750-1030.

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Identifying nest predators of American avocets (Recurvirostra americana) and black-necked stilts (Himantopus mexicanus) in San Francisco Bay, California

We evaluated predation on nests and methods to detect predators using a combination of infrared cameras and plasticine eggs at nests of American avocets (Recurvirostra americana) and black-necked stilts (Himantopus mexicanus) in Don Edwards San Francisco Bay National Wildlife Refuge, San Mateo and Santa Clara counties, California. Each technique indicated that predation was prevalent; 59% of monit

A nonlethal microsampling technique to monitor the effects of mercury on wild bird eggs

Methylmercury is the predominant chemical form of mercury reported in the eggs of wild birds, and the embryo is the most sensitive life stage to methylmercury toxicity. Protective guidelines have been based mainly on captive-breeding studies with chickens (Gallus gallus), mallards (Anas platyrhynchos), and ring-necked pheasants (Phasianus colchicus) or on field studies where whole eggs were colle
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Ecosystems Mission Area, Eastern Ecological Science Center, Patuxent Wildlife Research Center, Western Ecological Research Center (WERC)

Organochlorine and PBDE concentrations in relation to cytochrome P450 activity in livers of Forster’s Terns (Sterna forsteri) and Caspian Terns (Hydroprogne caspia), in San Francisco Bay, California

We measured halogenated organic contaminants (HOCs) [polybrominated diphenyl ethers (PBDEs), polychlorinated biphenyls (PCBs), and dichloro-diphenyl-trichloroethane (DDT)] and P450 [e.g., ethoxyresorufin-O-dealkylase (EROD)] stress in livers from Caspian tern (Hydroprogne caspia) adults and Forster’s tern (Sterna forsteri) adults and chicks in San Francisco Bay (SFB). Penta BDEs and tetra PBDEs co
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Ecosystems Mission Area, Contaminant Biology, Environmental Health Program, Western Ecological Research Center (WERC)

Methylmercury cycling, bioaccumulation, and export from agricultural and non-agricultural wetlands in the Yolo Bypass

This 18-month field study addresses the seasonal and spatial patterns and processes controlling methylmercury (MeHg) production, bioaccumulation, and export from natural and agricultural wetlands of the Yolo Bypass Wildlife Area (YBWA). The data were collected in conjuntion with a Proposition 40 grant from the State Water Resources Control Board in support of the development of Best Management Pra
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Water Resources Mission Area, Ecosystems Mission Area, Toxic Substances Hydrology, Environmental Health Program, Forest and Rangeland Ecosystem Science Center

Predicting climate change impacts on Great Basin wetlands, migratory birds, and their prey: workshop

No abstract available.

Embryo malposition as a potential mechanism for mercury-induced hatching failure in bird eggs

We examined the prevalence of embryo malpositions and deformities in relation to total mercury (THg) and selenium (Se) concentrations in American avocet (Recurvirostra americana), black‐necked stilt (Himantopus mexicanus), and Forster's tern (Sterna forsteri) eggs in San Francisco Bay (CA, USA) during 2005 to 2007. Overall, 11% of embryos were malpositioned in eggs ≥18 d of age (n = 282) and 2% of
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Ecosystems Mission Area, Contaminant Biology, Environmental Health Program

Sexing California gulls using morphometrics and discriminant function analysis

A discriminant function analysis (DFA) model was developed with DNA sex verification so that external morphology could be used to sex 203 adult California Gulls (Larus californicus) in San Francisco Bay (SFB). The best model was 97% accurate and included head-to-bill length, culmen depth at the gonys, and wing length. Using an iterative process, the model was simplified to a single measurement (he

Invertebrate mercury bioaccumulation in permanent, seasonal, and flooded rice wetlands within California's Central Valley

We examined methylmercury (MeHg) bioavailability in four of the most predominant wetland habitats in California's Central Valley agricultural region during the spring and summer: white rice, wild rice, permanent wetlands, and shallowly-flooded fallow fields. We sampled MeHg and total mercury (THg) concentrations in two aquatic macroinvertebrate taxa at the inlets, centers, and outlets of four repl
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Ecosystems Mission Area, Contaminant Biology, Environmental Health Program, Western Ecological Research Center (WERC)

Agricultural wetlands as potential hotspots for mercury bioaccumulation: Experimental evidence using caged fish

Wetlands provide numerous ecosystem services, but also can be sources of methylmercury (MeHg) production and export. Rice agricultural wetlands in particular may be important sites for MeHg bioaccumulation due to their worldwide ubiquity, periodic flooding schedules, and high use by wildlife. We assessed MeHg bioaccumulation within agricultural and perennial wetlands common to California’s Central
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Ecosystems Mission Area, Contaminant Biology, Environmental Health Program

Accuracy of egg flotation throughout incubation to determine embryo age and incubation day in waterbird nests

Floating bird eggs to estimate their age is a widely used technique, but few studies have examined its accuracy throughout incubation. We assessed egg flotation for estimating hatch date, day of incubation, and the embryo's developmental age in eggs of the American Avocet (Recurvirostra americana), Black-necked Stilt (Himantopus mexicanus), and Forster's Tern (Sterna forsteri). Predicted hatch dat
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Ecosystems Mission Area, Western Ecological Research Center (WERC)

California gull intrusions on breeding waterbird colonies and impacts to reproductive success: implications for the South Bay Salt Pond Restoration Project.

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Ecosystems Mission Area, Western Ecological Research Center (WERC)

Selenium bioaccumulation and body condition in shorebirds and terns breeding in San Francisco Bay, California, USA

The present study evaluated Se bioaccumulation in four waterbird species (n = 206 birds) that breed within San Francisco Bay, California, USA: American avocets (Recurvirostra americana), black-necked stilts (Himantopus mexicanus), Forster's terns (Sterna forsteri), and Caspian terns (Hydroprogne caspia). Selenium concentrations were variable and influenced by several factors, including species, re
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Ecosystems Mission Area, Western Ecological Research Center (WERC)

Non-USGS Publications**

Suchanek, T.H., Cooke, J., Keller, K., Richerson, P.J., Eagles-Smith, C.A., Harner, E.J., Adam, D.P., 2009, A mass balance mercury budget for a mine-dominated lake - Clear Lake, California: Water, Air, & Soil Pollution, v. 196, p. 51-73.
Richerson, P.J., Suchanek, T.H., Zierenberg, R.A., Osleger, D.A., Heyvaert, A.C., Slotton, D.G., Eagles-Smith, C.A., Vaughn, C.E., 2008, Anthropogenic stressors and changes in the Clear Lake ecosystem as recorded in sediment cores: Ecological Applications, v. 18, no. 8, p. A257-A283.
Suchanek, T.H., Eagles-Smith, C.A., Harner, E.J., 2008, Is Clear Lake methylmercury distribution decoupled from bulk mercury loading?: Ecological Applications, v. 18, no. 8, p. A107-A127.
Suchanek, T.H., Eagles-Smith, C.A., Slotton, D.G., Harner, E.J., Adam, D.P., 2008, Mercury in abiotic matrices of Clear Lake, California- Human health and ecotoxicological implications: Ecological Applications, v. 18, no. 8, p. A128-A157.
Anderson, D.W., Suchanek, T.H., Eagles-Smith, C.A., Cahill, Jr., T.M., 2008, Mercury residues and productivity in osprey and grebes from a mine-dominated ecosystem: Ecological Applications, v. 18, no. 8, p. A227-A238.
Suchanek, T.H., Eagles-Smith, C.A., Slotton, D.G., Harner, E.J., Adam, D.P., Colwell, A.E., Anderson, N.L., Woodward, D.L., 2008, Mine-derived mercury- Effects on lower trophic species in Clear Lake, California: Ecological Applications, v. 18, no. 8, p. A158-A176.
Suchanek, T.H., Eagles-Smith, C.A., Slotton, D.G., Harner, E.J., Colwell, A.E., Anderson, N.L., Mullen, L.H., Flanders, J.R., Adam, D.P., McElroy, K.J., 2008, Spatiotemporal trends in fish mercury from a mine-dominated ecosystem- Clear Lake, California: Ecological Applications, v. 18, no. 8, p. A177-A195.
McEachern, M.B., Eagles-Smith, C.A., Efferson, C.M., Van Vuren, D.H., 2006, Evidence for local specialization in a generalist mammalian herbivore, Neotoma fuscipes: Oikos, v. 113, p. 440-448.

**Disclaimer: The views expressed in Non-USGS publications are those of the author and do not represent the views of the USGS, Department of the Interior, or the U.S. Government.

To request an interview, contact fresc_outreach@usgs.gov or call (541) 750-1030.

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