Coral reefs are important for supporting biodiversity, fisheries, tourism, and coastal protection, but are in decline worldwide, primarily due to extreme heat waves and subsequent coral bleaching, in addition to other stressors.
Kimberly Yates, Ph.D.
Dr. Kimberly Yates is a senior research oceanographer at the U.S. Geological Survey, St. Petersburg Center for Coastal and Marine Science (SPCMSC).
Dr. Yates is also a member of the U.S. Interagency Work Group on Ocean Acidification (IWG-OA), the Executive and founding Steering Committees of the Southeast Ocean and Coastal Acidification Network (SOCAN), and served as Co-Chair of the Ocean Carbon & Biogeochemistry – Ocean Acidification Subcommittee (OCB-OA). She specializes in integrated science studies that examine how changes in coastal ecosystem processes may impact or mitigate risks from coastal hazards, using a whole system perspective that considers the interactions and linkages among chemistry, biology and the physical environment. Much of her recent work has focused on how coral reef seafloor erosion changes risks from sea level rise, waves and storms; impacts on coral reefs and estuaries from coastal and ocean acidification; and identifying and characterizing coastal climate change refuges.
Professional Experience
Senior Research Oceanographer, U.S. Geological Survey, St. Petersburg, FL 2007 – Present
Research Oceanographer, U.S. Geological Survey, St. Petersburg, FL 1998 – 2007
Research Assistant, University of South Florida, Department of Geology 1989 – 1997
Education and Certifications
University of South Florida (USF), Honors Program & Geology, B.A., 1992
University of South Florida, Geology (Biogeochemistry), Ph.D., 1996
Affiliations and Memberships*
Executive Committee Member and Steering Committee Member, Southeast Ocean and Coastal Acidification Network, 2015-present
Committee Member, Interagency Working Group on Ocean Acidification, National Ocean Science and Technology Subcommittee, 2009-present
Co-Chair, Ocean Carbon and Biogeochemistry Program – Ocean Acidification Subcommittee, 2011-2016
Committee Member, Gulf of Mexico Coastal Acidification Network, 2016-present
Science and Products
Quantifying Flood Risk and Reef Risk Reduction Benefits in Florida and Puerto Rico: The Consequences of Hurricane Damage, Long-term Degradation, and Restoration Opportunities
Coral Reef Ecosystem Studies (CREST)
Coral Reef Seafloor Erosion and Coastal Hazards
Coral Reef Community Calcification and Metabolism
Underwater Photogrammetry Products of Looe Key, Florida From Images Acquired Using the SQUID-5 System in July 2022
Underwater Photogrammetry Products of Big Pine Ledge, Florida From Images Acquired Using the SQUID-5 System in July 2022
Underwater Photogrammetry Products of Summerland Ledge, Florida From Images Acquired Using the SQUID-5 System in July 2022
Underwater photogrammetry products of Big Pine Ledge, Florida from images acquired using the SQUID-5 system in July 2021
CO2 System Measurements in Hillsborough River, Florida
Overlapping seabed images and location data acquired using the SQUID-5 system at Looe Key, Florida, in July 2021, with structure-from-motion derived point cloud, digital elevation model and orthomosaic of submerged topography
Overlapping seabed images and location data acquired using the SQUID-5 system at Eastern Dry Rocks coral reef, Florida, in May 2021, with derived point cloud, digital elevation model and orthomosaic of submerged topography
Time Series of Autonomous Carbonate System Parameter Measurements in Middle Tampa Bay, Florida, USA
Projected Seafloor Elevation Change and Relative Sea Level Rise along the Florida Reef Tract from Miami to Boca Chica Key 25, 50, 75, and 100 Years from 2016
Projected Seafloor Elevation Change and Relative Sea Level Rise Surrounding Maui, Hawaii 25, 50, 75, and 100 Years from 1999
Projected Seafloor Elevation Change and Relative Sea Level Rise Near St. Thomas, U.S. Virgin Islands 25, 50, 75, and 100 Years from 2014
Projected Seafloor Elevation Change and Relative Sea Level Rise Near St. Croix, U.S. Virgin Islands 25, 50, 75, and 100 Years from 2014
Coral reefs are important for supporting biodiversity, fisheries, tourism, and coastal protection, but are in decline worldwide, primarily due to extreme heat waves and subsequent coral bleaching, in addition to other stressors.
Coral reefs are important for supporting biodiversity, fisheries, tourism, and coastal protection, but are in decline worldwide, primarily due to extreme heat waves and subsequent coral bleaching, in addition to other stressors.
Coral reefs are important for supporting biodiversity, fisheries, tourism, and coastal protection, but are in decline worldwide, primarily due to extreme heat waves and subsequent coral bleaching, in addition to other stressors.
The R/V Sallenger tows the structure-from-motion quantitative underwater imaging device with 5 cameras (SQUID-5) across the water over Looe Key Reef in the Florida Keys.
The R/V Sallenger tows the structure-from-motion quantitative underwater imaging device with 5 cameras (SQUID-5) across the water over Looe Key Reef in the Florida Keys.
The SQUID-5 system is pulled behind the USGS research vessel the R/V Sallenger near Looe Key. The SQUID-5 is taking images of the seafloor which will be made into 3-dimensional models.
The SQUID-5 system is pulled behind the USGS research vessel the R/V Sallenger near Looe Key. The SQUID-5 is taking images of the seafloor which will be made into 3-dimensional models.
Studying Seafloor Erosion in the Florida Keys
The challenge:
Studying Seafloor Erosion in the Florida Keys
The challenge:
These Elkhorn corals (Acropora palmata) near Buck Island, U.S. Virgin Islands have died and collapsed into rubble. As coral reef structure degrades, valuable habitat for marine life is lost and nearby coastlines become more susceptible to storms, waves and erosion.
These Elkhorn corals (Acropora palmata) near Buck Island, U.S. Virgin Islands have died and collapsed into rubble. As coral reef structure degrades, valuable habitat for marine life is lost and nearby coastlines become more susceptible to storms, waves and erosion.
Data logger and underwater sensor deployed at a mangrove coral site in Otter Creek to measure light reaching corals under the mangroves.
Data logger and underwater sensor deployed at a mangrove coral site in Otter Creek to measure light reaching corals under the mangroves.
Underwater light sensor deployed under the mangrove canopy where corals are growing.
Underwater light sensor deployed under the mangrove canopy where corals are growing.
Above (top of picture) and below (bottom of picture) image of mangroves in Otter Creek where corals grow under and attached to mangrove prop roots.
Above (top of picture) and below (bottom of picture) image of mangroves in Otter Creek where corals grow under and attached to mangrove prop roots.
Impact of Hurricane Irma on coral reef sediment redistribution at Looe Key Reef, Florida, USA
Nutrient and carbonate chemistry patterns associated with Karenia brevis blooms in three West Florida Shelf estuaries 2020-2023
An assessment of HgII to preserve carbonate system parameters in organic-rich estuarine waters
This work assesses the effectiveness of sample preservation techniques for measurements of pHT (total scale), total dissolved inorganic carbon (CT), and total alkalinity (AT) in organic-rich estuarine waters as well as the internal consistency of measurements and calculations (e.g., AT, pHT, and CT) in these waters. Using mercuric chloride (HgCl2)-treated and untreated water samples, measurements
Coastal acidification trends and controls in a subtropical estuary, Tampa Bay, Florida USA
Many coastal estuaries have experienced declines in pH over the past few decades due to coastal acidification. However, mean monthly water column pH values (collected during daylight hours) have increased in Tampa Bay, Florida over recent decades concurrent with seagrass recovery. We measured changes in carbonate system and water quality variables in Tampa Bay and the near-coastal Gulf of Mexico e
Increasing hypoxia on global coral reefs under ocean warming
Ocean deoxygenation is predicted to threaten marine ecosystems globally. However, current and future oxygen concentrations and the occurrence of hypoxic events on coral reefs remain underexplored. Here, using autonomous sensor data to explore oxygen variability and hypoxia exposure at 32 representative reef sites, we reveal that hypoxia is already pervasive on many reefs. Eighty-four percent of re
Ocean acidification in the Gulf of Mexico: Drivers, impacts, and unknowns
Ocean acidification (OA) has resulted in global-scale changes in ocean chemistry, which can disturb marine organisms and ecosystems. Despite its extensively populated coastline, many marine-dependent communities, and valuable economies, the Gulf of Mexico (GOM) remains a relatively understudied region with respect to acidification. In general, the warm waters of the GOM are better buffered from ac
Subsampling large-scale digital elevation models to expedite geospatial analyses in coastal regions
Large-area, high-resolution digital elevation models (DEMs) created from light detection and ranging (LIDAR) and/or multibeam echosounder data sets are commonly used in many scientific disciplines. These DEMs can span thousands of square kilometers, typically with a spatial resolution of 1 m or finer, and can be difficult to process and analyze without specialized computers and software. Such DEMs
Biology: Integrating core to essential variables (Bio-ICE) task team report for hard corals
Rigorously valuing the impact of projected coral reef degradation on coastal hazard risk in Florida
Integrating high-resolution coastal acidification monitoring data across seven United States estuaries
Beginning in 2015, the United States Environmental Protection Agency’s (EPA’s) National Estuary Program (NEP) started a collaboration with partners in seven estuaries along the East Coast (Barnegat Bay; Casco Bay), West Coast (Santa Monica Bay; San Francisco Bay; Tillamook Bay), and the Gulf of Mexico (GOM) Coast (Tampa Bay; Mission-Aransas Estuary) of the United States to expand the use of autono
Measuring coastal acidification using in situ sensors in the National Estuary Program
Identifying mangrove-coral habitats in the Florida Keys
Multi-grid Analysis of Point Stability Tool
Science and Products
Quantifying Flood Risk and Reef Risk Reduction Benefits in Florida and Puerto Rico: The Consequences of Hurricane Damage, Long-term Degradation, and Restoration Opportunities
Coral Reef Ecosystem Studies (CREST)
Coral Reef Seafloor Erosion and Coastal Hazards
Coral Reef Community Calcification and Metabolism
Underwater Photogrammetry Products of Looe Key, Florida From Images Acquired Using the SQUID-5 System in July 2022
Underwater Photogrammetry Products of Big Pine Ledge, Florida From Images Acquired Using the SQUID-5 System in July 2022
Underwater Photogrammetry Products of Summerland Ledge, Florida From Images Acquired Using the SQUID-5 System in July 2022
Underwater photogrammetry products of Big Pine Ledge, Florida from images acquired using the SQUID-5 system in July 2021
CO2 System Measurements in Hillsborough River, Florida
Overlapping seabed images and location data acquired using the SQUID-5 system at Looe Key, Florida, in July 2021, with structure-from-motion derived point cloud, digital elevation model and orthomosaic of submerged topography
Overlapping seabed images and location data acquired using the SQUID-5 system at Eastern Dry Rocks coral reef, Florida, in May 2021, with derived point cloud, digital elevation model and orthomosaic of submerged topography
Time Series of Autonomous Carbonate System Parameter Measurements in Middle Tampa Bay, Florida, USA
Projected Seafloor Elevation Change and Relative Sea Level Rise along the Florida Reef Tract from Miami to Boca Chica Key 25, 50, 75, and 100 Years from 2016
Projected Seafloor Elevation Change and Relative Sea Level Rise Surrounding Maui, Hawaii 25, 50, 75, and 100 Years from 1999
Projected Seafloor Elevation Change and Relative Sea Level Rise Near St. Thomas, U.S. Virgin Islands 25, 50, 75, and 100 Years from 2014
Projected Seafloor Elevation Change and Relative Sea Level Rise Near St. Croix, U.S. Virgin Islands 25, 50, 75, and 100 Years from 2014
Coral reefs are important for supporting biodiversity, fisheries, tourism, and coastal protection, but are in decline worldwide, primarily due to extreme heat waves and subsequent coral bleaching, in addition to other stressors.
Coral reefs are important for supporting biodiversity, fisheries, tourism, and coastal protection, but are in decline worldwide, primarily due to extreme heat waves and subsequent coral bleaching, in addition to other stressors.
Coral reefs are important for supporting biodiversity, fisheries, tourism, and coastal protection, but are in decline worldwide, primarily due to extreme heat waves and subsequent coral bleaching, in addition to other stressors.
Coral reefs are important for supporting biodiversity, fisheries, tourism, and coastal protection, but are in decline worldwide, primarily due to extreme heat waves and subsequent coral bleaching, in addition to other stressors.
The R/V Sallenger tows the structure-from-motion quantitative underwater imaging device with 5 cameras (SQUID-5) across the water over Looe Key Reef in the Florida Keys.
The R/V Sallenger tows the structure-from-motion quantitative underwater imaging device with 5 cameras (SQUID-5) across the water over Looe Key Reef in the Florida Keys.
The SQUID-5 system is pulled behind the USGS research vessel the R/V Sallenger near Looe Key. The SQUID-5 is taking images of the seafloor which will be made into 3-dimensional models.
The SQUID-5 system is pulled behind the USGS research vessel the R/V Sallenger near Looe Key. The SQUID-5 is taking images of the seafloor which will be made into 3-dimensional models.
Studying Seafloor Erosion in the Florida Keys
The challenge:
Studying Seafloor Erosion in the Florida Keys
The challenge:
These Elkhorn corals (Acropora palmata) near Buck Island, U.S. Virgin Islands have died and collapsed into rubble. As coral reef structure degrades, valuable habitat for marine life is lost and nearby coastlines become more susceptible to storms, waves and erosion.
These Elkhorn corals (Acropora palmata) near Buck Island, U.S. Virgin Islands have died and collapsed into rubble. As coral reef structure degrades, valuable habitat for marine life is lost and nearby coastlines become more susceptible to storms, waves and erosion.
Data logger and underwater sensor deployed at a mangrove coral site in Otter Creek to measure light reaching corals under the mangroves.
Data logger and underwater sensor deployed at a mangrove coral site in Otter Creek to measure light reaching corals under the mangroves.
Underwater light sensor deployed under the mangrove canopy where corals are growing.
Underwater light sensor deployed under the mangrove canopy where corals are growing.
Above (top of picture) and below (bottom of picture) image of mangroves in Otter Creek where corals grow under and attached to mangrove prop roots.
Above (top of picture) and below (bottom of picture) image of mangroves in Otter Creek where corals grow under and attached to mangrove prop roots.
Impact of Hurricane Irma on coral reef sediment redistribution at Looe Key Reef, Florida, USA
Nutrient and carbonate chemistry patterns associated with Karenia brevis blooms in three West Florida Shelf estuaries 2020-2023
An assessment of HgII to preserve carbonate system parameters in organic-rich estuarine waters
This work assesses the effectiveness of sample preservation techniques for measurements of pHT (total scale), total dissolved inorganic carbon (CT), and total alkalinity (AT) in organic-rich estuarine waters as well as the internal consistency of measurements and calculations (e.g., AT, pHT, and CT) in these waters. Using mercuric chloride (HgCl2)-treated and untreated water samples, measurements
Coastal acidification trends and controls in a subtropical estuary, Tampa Bay, Florida USA
Many coastal estuaries have experienced declines in pH over the past few decades due to coastal acidification. However, mean monthly water column pH values (collected during daylight hours) have increased in Tampa Bay, Florida over recent decades concurrent with seagrass recovery. We measured changes in carbonate system and water quality variables in Tampa Bay and the near-coastal Gulf of Mexico e
Increasing hypoxia on global coral reefs under ocean warming
Ocean deoxygenation is predicted to threaten marine ecosystems globally. However, current and future oxygen concentrations and the occurrence of hypoxic events on coral reefs remain underexplored. Here, using autonomous sensor data to explore oxygen variability and hypoxia exposure at 32 representative reef sites, we reveal that hypoxia is already pervasive on many reefs. Eighty-four percent of re
Ocean acidification in the Gulf of Mexico: Drivers, impacts, and unknowns
Ocean acidification (OA) has resulted in global-scale changes in ocean chemistry, which can disturb marine organisms and ecosystems. Despite its extensively populated coastline, many marine-dependent communities, and valuable economies, the Gulf of Mexico (GOM) remains a relatively understudied region with respect to acidification. In general, the warm waters of the GOM are better buffered from ac
Subsampling large-scale digital elevation models to expedite geospatial analyses in coastal regions
Large-area, high-resolution digital elevation models (DEMs) created from light detection and ranging (LIDAR) and/or multibeam echosounder data sets are commonly used in many scientific disciplines. These DEMs can span thousands of square kilometers, typically with a spatial resolution of 1 m or finer, and can be difficult to process and analyze without specialized computers and software. Such DEMs
Biology: Integrating core to essential variables (Bio-ICE) task team report for hard corals
Rigorously valuing the impact of projected coral reef degradation on coastal hazard risk in Florida
Integrating high-resolution coastal acidification monitoring data across seven United States estuaries
Beginning in 2015, the United States Environmental Protection Agency’s (EPA’s) National Estuary Program (NEP) started a collaboration with partners in seven estuaries along the East Coast (Barnegat Bay; Casco Bay), West Coast (Santa Monica Bay; San Francisco Bay; Tillamook Bay), and the Gulf of Mexico (GOM) Coast (Tampa Bay; Mission-Aransas Estuary) of the United States to expand the use of autono
Measuring coastal acidification using in situ sensors in the National Estuary Program
Identifying mangrove-coral habitats in the Florida Keys
Multi-grid Analysis of Point Stability Tool
*Disclaimer: Listing outside positions with professional scientific organizations on this Staff Profile are for informational purposes only and do not constitute an endorsement of those professional scientific organizations or their activities by the USGS, Department of the Interior, or U.S. Government