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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 42784

Reframing fish passage prioritization for human nutrition outcomes Reframing fish passage prioritization for human nutrition outcomes

Water control infrastructure forms barriers that fragment river habitats, reducing aquatic biodiversity and the ecosystem services it provides. Irrigation infrastructure, for example, although implemented to support food production, highlights problematic trade-offs against wild food systems like inland fisheries which are a critical food resource for tens of millions of people...
Authors
Nicolette Duncan, Ana Horta, John Conallin, Tim Marsden, Abigail J. Lynch, Ivor Stuart

Improving efficiency of disease vector sampling in the field: An automatic solar-powered mosquito trapping system Improving efficiency of disease vector sampling in the field: An automatic solar-powered mosquito trapping system

Trapping mosquitoes to quantify their distribution and abundance is often a key step in monitoring dynamics of vector-borne diseases. This is the case in Hawaii, where avian malaria is devastating native forest birds that are highly susceptible to non-native diseases. However, mosquito trapping is difficult and labor intensive. A typical operation requires traps to be visited multiple...
Authors
Eben H. Paxton, Laura van Bergeijk

Distribution, abundance, and habitat characteristics of Coastal Cactus Wrens (Campylorhynchus brunneicapillus) in San Diego County, California—2024 data summary Distribution, abundance, and habitat characteristics of Coastal Cactus Wrens (Campylorhynchus brunneicapillus) in San Diego County, California—2024 data summary

Executive Summary We surveyed for coastal Cactus Wren (Campylorhynchus brunneicapillus) in 507 established plots in San Diego County in 2024, encompassing four genetic clusters (Otay, Lake Jennings, Sweetwater/Encanto, and San Pasqual). Of the 507 plots, 376 have been surveyed every year starting in 2020. Two surveys were completed at each plot between March 1 and July 31, 2024. Cactus...
Authors
Suellen Lynn, Barbara E. Kus

From critical minerals to food security, the benefits of data collaboration From critical minerals to food security, the benefits of data collaboration

The volume of data in the public geoscience sphere is rapidly and continually expanding. At Geoscience Australia (GA) we saw an over 500% increase in data points within our relational databases between 2018 and 2024, over the life of the Exploring for the Future (EFTF) program. With the Resourcing Australia’s Prosperity initiative, a continued increase in data quantity will be seen for...
Authors
Steph G. Hawkins, K Waltenberg, Catherine A. Stuart, Evgeniy Bastrakov, George N.D. Case, Jagoda Crawford, Lian Flick, Geoff Fraser, Christoph Gerber, Garth E. Graham, Kristin Guerin, Albert H. Hofstra, Cath Hughes, David L. Huston, Chris J.M. Lawley, Nina Welti, Bronwen Wang, Aaron Sedgmen, Vladimir A. Lisistin, Paul Abhijit, Tim Stobaus, Axel Suckow

Factors structuring macrofaunal communities of hydrocarbon seeps along the Cascadia margin Factors structuring macrofaunal communities of hydrocarbon seeps along the Cascadia margin

Cold seeps, fueled by hydrocarbon-based chemosynthesis, support unique benthic communities that can vary across small spatial scales influenced by local geochemistry. We examined the community structure and function of macrofauna in cold seeps along the Cascadia margin on the edge of gas hydrate stability—a dynamic environment that may fluctuate as seafloor temperatures change. These...
Authors
Penny Jo Mccowen, Jill R. Bourque, Donald C. Behringer, Nancy G. Prouty, Amanda W.J. Demopoulos

Detection and genetic characterization of red-spotted grouper nervous necrosis virus and a novel genotype of nervous necrosis virus in black sea bass from the U.S. Atlantic coast Detection and genetic characterization of red-spotted grouper nervous necrosis virus and a novel genotype of nervous necrosis virus in black sea bass from the U.S. Atlantic coast

Nervous necrosis virus (NNV) causes a neurologic disease in a wide range of marine fish and poses serious disease risks to marine aquaculture worldwide. Little is known about the presence of NNV along the Atlantic coast of the United States, aside from the presence of barfin flounder nervous necrosis virus (BFNNV) in coldwater species in the northern part of this range. Herein we...
Authors
Jan Lovy, Miriam Abbadi, Anna Toffan, Nilanjana Das, James Neugebauer, William Batts, Peter Clarke

Causal interpretations can be based on mechanistic knowledge Causal interpretations can be based on mechanistic knowledge

There exists a long-standing disconnect between statistical and mechanistic approaches to the development of causal understanding. Statistical approaches, which have dominated the literature, have focused on the need to obtain perfectly unbiased estimates of causal effects often using either experimental, quasi-experimental or other methods. Mechanistic approaches have instead focused on
Authors
James Grace, Glenn Guntenspergen, Kevin Buffington, Justine Annaliese Neville, Karen M. Thorne, Michael J. Osland, Melinda Martinez, Joel Carr, Debra A. Willard

Movements and habitat use vary across the Rocky Mountain Population of trumpeter swans Movements and habitat use vary across the Rocky Mountain Population of trumpeter swans

The Rocky Mountain Population (RMP) of trumpeter swans Cygnus buccinator (hereafter, swans) in North America includes breeders in the Greater Yellowstone Area (GYA) and other western states (together, United States segment) and western provinces of Canada (Canada segment). Conservation concern for the United States segment stems from its slow population growth and the resident nature of...
Authors
Sharon A. Poessel, Todd Sanders, William Long, Andrea Kristof, Brandon Reishus, Matt Proett, Claire Gower, Nicole Ibrahim, Todd E. Katzner

Assessing survey design for long-term population trend detection in piping plovers Assessing survey design for long-term population trend detection in piping plovers

Determining appropriate spatio-temporal scales for monitoring migratory shorebirds is challenging. Effective surveys must detect population trends without excessive or insufficient sampling, yet many programs lack formal evaluations of survey effectiveness. Using data from 2012 to 2019 on Louisiana’s barrier islands (Whiskey, west Raccoon, east Raccoon, and Trinity), we assessed how...
Authors
Eve Bohnett, Jessica Schulz, Robert C. Dobbs, Thomas Hoctor, Bilal Ahmad, Wajid Rashid, J. Hardin Waddle

Changes in aeolian saltation cloud properties with wind speed and ripples Changes in aeolian saltation cloud properties with wind speed and ripples

Aeolian sediment transport shapes landscapes on Earth and other planetary surfaces, yet key uncertainties remain in how the near-bed saltation cloud responds to changing wind and surface conditions. Leveraging recent advances in image-based particle tracking, we conducted wind tunnel experiments using high-speed imaging and Particle Tracking Velocimetry to quantify sand grain...
Authors
Madeline Margaret Kelley, Ian J. Walker, Mark W. Schmeeckle, Christy Swann, Ron Dorn, Michaela Roberts, Patrick O'Brien

Impacts of onshore wind energy production on biodiversity Impacts of onshore wind energy production on biodiversity

Wind is increasingly used as a renewable source of energy worldwide. However, harvesting wind energy can have negative consequences for biodiversity. In this Review, we summarize the growth of onshore wind power, its impacts on species and ecosystems, and how those impacts are assessed and mitigated. Across the construction, operation and decommissioning stages, wind facilities are...
Authors
Todd E. Katzner, David M. Nelson, Ana Teresa Marques, Christian C. Voigt, Sergio A Lambertucci, Natalia Rebolo, Enrico Bernard, Robert H. Diehl, Megan Murgatroyd

Seasonal variation in bay-marsh sediment exchange through a back-barrier salt marsh tidal creek Seasonal variation in bay-marsh sediment exchange through a back-barrier salt marsh tidal creek

Salt marsh resilience to sea-level rise largely depends on the balance of sediment exchanges with surrounding bays. In this study, we investigate mechanisms that determine residual sediment fluxes using continuous measurements of bay-marsh sediment exchange conducted in a tidal creek spanning 13 months (753 tidal cycles) in an intertidal marsh recently subsidized with sediment via thin...
Authors
Gregg A. Snedden, S. Jarrell Smith
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