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Publications

Below is a list of available NOROCK peer reviewed and published science. If you are in search of a specific publication and cannot find it below or through a search, please contact twojtowicz@usgs.gov.

Filter Total Items: 1308

RAD sequencing yields a high success rate for westslope cutthroat and rainbow trout species-diagnostic SNP assays RAD sequencing yields a high success rate for westslope cutthroat and rainbow trout species-diagnostic SNP assays

Hybridization with introduced rainbow trout threatens most native westslope cutthroat trout populations. Understanding the genetic effects of hybridization and introgression requires a large set of high-throughput, diagnostic genetic markers to inform conservation and management. Recently, we identified several thousand candidate single-nucleotide polymorphism (SNP) markers based on RAD...
Authors
Stephen J. Amish, Paul A. Hohenlohe, Sally Painter, Robb F. Leary, Clint C. Muhlfeld, Fred W. Allendorf, Gordon Luikart

Examining spring wet slab and glide avalanche occurrence along the Going-to-the-Sun Road corridor, Glacier National Park, Montana, USA Examining spring wet slab and glide avalanche occurrence along the Going-to-the-Sun Road corridor, Glacier National Park, Montana, USA

Wet slab and glide snow avalanches are dangerous and yet can be particularly difficult to predict. Wet slab and glide avalanches are presumably triggered by free water moving through the snowpack and the subsequent interaction with layer or ground interfaces, and typically occur in the spring during warming and subsequent melt periods. In Glacier National Park (GNP), Montana, both types...
Authors
Erich H. Peitzsch, Jordy Hendrikx, Daniel B. Fagre, Blase Reardon

Climate change and infectious disease dynamics Climate change and infectious disease dynamics

No abstract available.
Authors
Raina K. Plowright, Paul C. Cross, Gary Tabor, Emily S. Almberg, Leslie Bienen, Peter J. Hudson

Genetic population substructure in bison at Yellowstone National Park Genetic population substructure in bison at Yellowstone National Park

The Yellowstone National Park bison herd is 1 of only 2 populations known to have continually persisted on their current landscape since pre-Columbian times. Over the last century, the census size of this herd has fluctuated from around 100 individuals to over 3000 animals. Previous studies involving radiotelemetry, tooth wear, and parturition timing provide evidence of at least 2...
Authors
Natalie D. Halbert, Peter J. Gogan, Philip W. Hedrick, Jacquelyn M. Wahl, James N. Derr

Assessing the status and trend of bat populations across broad geographic regions with dynamic distribution models Assessing the status and trend of bat populations across broad geographic regions with dynamic distribution models

Bats face unprecedented threats from habitat loss, climate change, disease, and wind power development, and populations of many species are in decline. A better ability to quantify bat population status and trend is urgently needed in order to develop effective conservation strategies. We used a Bayesian autoregressive approach to develop dynamic distribution models for Myotis lucifugus...
Authors
Thomas J. Rodhouse, Patricia C. Ormsbee, Kathryn M. Irvine, Lee A. Vierling, Joseph M. Szewczak, Kerri T. Vierling

Guidelines for collecting and maintaining archives for genetic monitoring Guidelines for collecting and maintaining archives for genetic monitoring

Rapid advances in molecular genetic techniques and the statistical analysis of genetic data have revolutionized the way that populations of animals, plants and microorganisms can be monitored. Genetic monitoring is the practice of using molecular genetic markers to track changes in the abundance, diversity or distribution of populations, species or ecosystems over time, and to follow...
Authors
Jennifer A. Jackson, Linda Laikre, C. Scott Baker, Katherine C. Kendall

Stable isotopes to detect food-conditioned bears and to evaluate human-bear management Stable isotopes to detect food-conditioned bears and to evaluate human-bear management

We used genetic and stable isotope analysis of hair from free-ranging black bears (Ursus americanus) in Yosemite National Park, California, USA to: 1) identify bears that consume human food, 2) estimate the diets of these bears, and 3) evaluate the Yosemite human–bear management program. Specifically, we analyzed the isotopic composition of hair from bears known a priori to be food...
Authors
John B. Hopkins, Paul L. Koch, Charles C. Schwartz, Jake M. Ferguson, Schuyler S. Greenleaf, Steven T. Kalinowski

What are plants doing and when? Using plant phenology to facilitate sustainable natural resources management What are plants doing and when? Using plant phenology to facilitate sustainable natural resources management

Climate change models for the northern Rocky Mountains predict changes in temperature and water availability that in turn will alter vegetation. Changes include timing of plant life-history events, or phenology, such as green-up, flowering and senescence, and shifts in species composition. Moreover, climate changes may favor different species, such as nonnative, annual grasses over...
Authors
Geneva W. Chong, Leslie A. Allen

Volcanogenic massive sulfide occurrence model Volcanogenic massive sulfide occurrence model

Volcanogenic massive sulfide deposits, also known as volcanic-hosted massive sulfide, volcanic-associated massive sulfide, or seafloor massive sulfide deposits, are important sources of copper, zinc, lead, gold, and silver (Cu, Zn, Pb, Au, and Ag). These deposits form at or near the seafloor where circulating hydrothermal fluids driven by magmatic heat are quenched through mixing with...
Authors
W.C. Pat Shanks, Randolph A. Koski, Dan L. Mosier, Klaus J. Schulz, Lisa A. Morgan, John F. Slack, W. Ian Ridley, Cynthia Dusel-Bacon, Robert R. Seal, Nadine M. Piatak

CDFISH: an individual-based, spatially-explicit, landscape genetics simulator for aquatic species in complex riverscapes CDFISH: an individual-based, spatially-explicit, landscape genetics simulator for aquatic species in complex riverscapes

We introduce Cost Distance FISHeries (CDFISH), a simulator of population genetics and connectivity in complex riverscapes for a wide range of environmental scenarios of aquatic organisms. The spatially-explicit program implements individual-based genetic modeling with Mendelian inheritance and k-allele mutation on a riverscape with resistance to movement. The program simulates...
Authors
Erin L. Landguth, Clint C. Muhlfeld, Gordon Luikart

WLCI researchers employ new approaches to help managers conserve deer migrations WLCI researchers employ new approaches to help managers conserve deer migrations

Elk, mule deer, pronghorn antelope, moose, and bighorn sheep are iconic animals of the American West. These hooved animals, known as ungulates, commonly travel 30–60 miles between seasonal ranges. These migrations between winter and summer ranges are vital for survival and reproduction. As habitat fragmentation continues, the conservation of ungulate migration routes has received...
Authors
Leslie A. Allen, Matthew J. Kauffman

Estimating westslope cutthroat trout (Oncorhynchus clarkii lewisi) movements in a river network using strontium isoscapes Estimating westslope cutthroat trout (Oncorhynchus clarkii lewisi) movements in a river network using strontium isoscapes

We used natural variation in the strontium concentration (Sr:Ca) and isotope composition (87Sr:86Sr) of stream waters and corresponding values recorded in otoliths of westslope cutthroat trout (Oncorhynchus clarkii lewisi) to examine movements during their life history in a large river network. We found significant spatial differences in Sr:Ca and 87Sr:86Sr values (strontium isoscapes)...
Authors
Clint C. Muhlfeld, Simon R. Thorrold, Thomas E. McMahon, Brian Marotz
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