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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 42710

Physiological and gene transcription assays to assess responses of mussels to environmental changes Physiological and gene transcription assays to assess responses of mussels to environmental changes

Coastal regions worldwide face increasing management concerns due to natural and anthropogenic forces that have the potential to significantly degrade nearshore marine resources. The goal of our study was to develop and test a monitoring strategy for nearshore marine ecosystems in remote areas that are not readily accessible for sampling. Mussel species have been used extensively to...
Authors
Katrina Counihan, Lizabeth Bowen, Brenda Ballachey, Heather A. Coletti, Tuula Hollman, Benjamin Pister, Tammy L Wilson

Estimating sightability of greater sage-grouse at leks using an aerial infrared system and N-mixture models Estimating sightability of greater sage-grouse at leks using an aerial infrared system and N-mixture models

Counts of grouse present at leks (breeding grounds) during spring are widely used to monitor population numbers and assess trends. However, only a proportion of birds available to count are detected resulting in a biased population index. We designed a study using an aerial integrated infrared imaging system (AIRIS) and experimental pseudo-leks to quantify sightability (proportion of...
Authors
Peter S. Coates, Gregory T. Wann, Gifford L. Gillette, Mark A. Ricca, Brian G. Prochazka, John P. Severson, Katie M. Andrle, Shawn P. Espinosa, Michael L. Casazza, David J. Delehanty

Reaffirmed occurrence of two vulnerable caddisfly species of conservation concern Reaffirmed occurrence of two vulnerable caddisfly species of conservation concern

Maramec Spring is home to two Ozark endemic caddisfly Species of Conservation Concern (SOCC). The Missouri Glyphospsyche Caddisfly, Glyphospsyche missouri, (Critically Imperiled; State Rank-S1; Global Rank-G1) is known from Maramec Spring and the receiving spring branch and nowhere else in the world. Similarly, the Artesian Agapetus Caddisfly, Agapetus artesus, (Vulnerable; State Rank-S3...
Authors
William Mabee, Andrea Schuhmann, Barry C. Poulton, Jennifer Girondo, Wes Swee, Tealetha Buckley, David Bowles, Beth Bowles, Russell Rhodes

Reducing wet ammonium deposition in Rocky Mountain National Park: The development and evaluation of a pilot early warning system for agricultural operations in eastern Colorado Reducing wet ammonium deposition in Rocky Mountain National Park: The development and evaluation of a pilot early warning system for agricultural operations in eastern Colorado

Agricultural emissions are the primary source of ammonia (NH3) deposition in Rocky Mountain National Park (RMNP), a Class I area, that is granted special air quality protections under the Clean Air Act. Between 2014 and 2016, the pilot phase of the Colorado agricultural nitrogen early warning system (CANEWS) was developed for agricultural producers to voluntarily and temporarily minimize...
Authors
Aaron Pena, Russ Schumacher, Scott Denning, William Faulkner, Jill Baron, Jay Ham, Dennis S. Ojima, Jeffrey Collett

Understanding reproductive allometry in turtles: A slippery “slope” Understanding reproductive allometry in turtles: A slippery “slope”

Measures of reproductive output in turtles are generally positively correlated with female body size. However, a full understanding of reproductive allometry in turtles requires logarithmic transformation of reproductive and body size variables prior to regression analyses. This allows for slope comparisons with expected linear or cubic relationships for linear to linear and linear to...
Authors
John B. Iverson, Peter V. Lindeman, Jeffrey E. Lovich

Differential plague susceptibility in species and populations of prairie dogs Differential plague susceptibility in species and populations of prairie dogs

Laboratory trials conducted over the past decade at U.S. Geological Survey National Wildlife Health Center indicate that wild populations of prairie dogs (Cynomys spp.) display different degrees of susceptibility to experimental challenge with fully virulent Yersinia pestis, the causative agent of plague. We evaluated patterns in prairie dog susceptibility to plague to determine whether...
Authors
Robin E. Russell, Daniel W. Tripp, Tonie E. Rocke

Interactive effects of food supplementation and snake fungal disease on pregnant Pygmy Rattlesnakes and their offspring Interactive effects of food supplementation and snake fungal disease on pregnant Pygmy Rattlesnakes and their offspring

In viviparous organisms, the ability to feed while pregnant may mitigate energetic trade-offs experienced during the reproductive process and enhance fecundity. However, anorexia during pregnancy has been reported in many crotaline snakes. The potential costs and benefits of feeding while pregnant are not completely described in the literature, and experimental studies have been...
Authors
Craig M. Lind, Amber Clark, Sarah A Smiley-Walters, Daniel Taylor, Marcos Isidoro Ayza, Jeffrey M. Lorch, Terence M. Farrell

Applying the ecology of aquatic–terrestrial linkages to freshwater and riparian management Applying the ecology of aquatic–terrestrial linkages to freshwater and riparian management

Global stressors such as climate change, invasive species, urbanization, agricultural practices, and pollution can alter aquatic resource subsidies to terrestrial consumers. The effects of these stressors on timing, quality, and quantity of aquatic subsidies, such as adult aquatic insects, to birds, herpetofauna, and mammals, have large implications for wildlife management (Baxter et al...
Authors
Johanna M. Kraus

Genomic pedigree reconstruction identifies predictors of mating and reproductive success in an invasive vertebrate Genomic pedigree reconstruction identifies predictors of mating and reproductive success in an invasive vertebrate

The persistence of an invasive species is influenced by its reproductive ecology, and a successful control program must operate on this premise. However, the reproductive ecology of invasive species may be enigmatic due to factors that also limit their management, such as cryptic coloration and behavior. We explored the mating and reproductive ecology of the invasive Brown Treesnake (BTS...
Authors
Brenna A Levine, Marlis R Douglas, Amy A. Yackel Adams, Bjorn Lardner, Robert Reed, Julie A. Savidge, Michael E Douglas

Examining progress toward achieving the Ten Steps of the Rome Declaration on Responsible Inland Fisheries Examining progress toward achieving the Ten Steps of the Rome Declaration on Responsible Inland Fisheries

Inland capture fisheries provide food for nearly a billion people and are important in the livelihoods of millions of households worldwide. Although there are limitations to evaluating many of the contributions made by inland capture fisheries, there is growing recognition by the international community that these services make critical contributions, most notably to food security and...
Authors
Abigail Lynch, Devin M. Bartley, Douglas Beard, Ian. G. Cowx, Simon Funge-Smith, William W. Taylor, Steve J. Cooke

Effects of ocean climate on the length and condition of forage fish in the Gulf of Alaska Effects of ocean climate on the length and condition of forage fish in the Gulf of Alaska

Climatic drivers of the size and body condition of forage fish in the North Pacific are poorly known. We hypothesized that length and condition of forage fish in the Gulf of Alaska (GoA) should vary in relation to ocean temperature on multiple scales. To test this hypothesis, we analyzed morphometric data for capelin (Mallotus catervarius) and Pacific sand lance (PSL; Ammodytes...
Authors
Sarah Ann Thompson, Marisol Garcia-Reyes, William Sydeman, Mayumi L. Arimitsu, Scott Hatch, John F. Piatt

In vitro immune function in laboratory-reared age-0 smallmouth bass (Micropterus dolomieu) relative to diet In vitro immune function in laboratory-reared age-0 smallmouth bass (Micropterus dolomieu) relative to diet

Smallmouth bass (Micropterus dolomieu) are used as an indicator species in environmental monitoring and assessment studies. However, laboratory-based studies for methods development and effector assessment are limited for this species. Nutrition, a known modulator of teleost physiological responses including immune function, is a critical knowledge-gap sometimes overlooked in the design...
Authors
Christopher Ottinger, Cheyenne R. Smith, Vicki S. Blazer
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