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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 42704

Evaluating time-removal models for estimating availability of boreal birds during point count surveys: Sample size requirements and model complexity Evaluating time-removal models for estimating availability of boreal birds during point count surveys: Sample size requirements and model complexity

We used conventional and finite mixture removal models with and without time-varying covariates to evaluate availability given presence for 152 bird species using data from point counts in boreal North America. We found that the choice of model had an impact on the estimability of unknown model parameters and affected the bias and variance of corrected counts. Finite mixture models...
Authors
Peter Solymos, Steven M. Matsuoka, Steven G. Cumming, Diana Stralberg, Patricia C. Fontaine, Fiona K. A. Schmiegelow, Samantha J. Song, Erin M. Bayne

Monitoring responses to variation in food supply for a migratory waterfowl: American Black Duck (Anas rubripes) in winter Monitoring responses to variation in food supply for a migratory waterfowl: American Black Duck (Anas rubripes) in winter

Wintering Black Ducks (Anas rubripes) concentrate in wetlands along the Atlantic coast where natural and anthropogenic disturbances have increased over the last 50 years, a period in which the population of Black Ducks has declined. We studied the sensitivity of Black Ducks to perturbations in food supply that often result from disturbances by storms, predators, and people. In the paper...
Authors
Perry S. Barboza, Dennis G. Jorde

Marine threats overlap key foraging habitat for two imperiled sea turtle species in the Gulf of Mexico Marine threats overlap key foraging habitat for two imperiled sea turtle species in the Gulf of Mexico

Effective management of human activities affecting listed species requires understanding both threats and animal habitat-use patterns. However, the extent of spatial overlap between high-use foraging areas (where multiple marine species congregate) and anthropogenic threats is not well known. Our modeling approach incorporates data on sea turtle spatial ecology and a suite of threats in...
Authors
Kristen M. Hart, Autumn R. Iverson, Ikuko Fujisaki, Margaret M. Lamont, David N. Bucklin, Donna J. Shaver

Aerial surveys of sea otters (Enhydra lutris) in Lower Cook Inlet, Alaska, May, 2017 Aerial surveys of sea otters (Enhydra lutris) in Lower Cook Inlet, Alaska, May, 2017

Portions of two stocks of northern sea otters (Enhydra lutris kenyoni) occur in Lower Cook Inlet (LCI), Alaska. Sea otters on the west side of LCI are considered part of the southwest Alaska stock; sea otters occupying eastern LCI are considered part of the southcentral Alaska stock. Information concerning the distributions and abundance of sea otters in LCI is needed to track the status...
Authors
Joel Gerlach-Miller, George G. Esslinger, Ben Weitzman

Behavioral differences following ingestion of large meals and consequences for management of a harmful invasive snake: A field experiment Behavioral differences following ingestion of large meals and consequences for management of a harmful invasive snake: A field experiment

Many snakes are uniquely adapted to ingest large prey at infrequent intervals. Digestion of large prey is metabolically and aerobically costly, and large prey boluses can impair snake locomotion, increasing vulnerability to predation. Cessation of foraging and use of refugia with microclimates facilitating digestion are expected to be strategies employed by free‐ranging snakes to cope...
Authors
Shane R. Siers, Amy A. Yackel Adams, Robert Reed

Quantifying geomorphic and vegetation change at sandbar campsites in response to flow regulation and controlled floods, Grand Canyon National Park, Arizona Quantifying geomorphic and vegetation change at sandbar campsites in response to flow regulation and controlled floods, Grand Canyon National Park, Arizona

Sandbars along the Colorado River in Grand Canyon National Park, USA, are an important recreational resource used as campsites by over 25,000 river runners and hikers annually. The number and size of campsites decreased following the completion of Glen Canyon Dam in 1963 due to reductions of sediment that replenish sandbars and increases in vegetation cover caused by flow regulation...
Authors
Daniel R. Hadley, Paul E. Grams, Matthew A. Kaplinski

Neutral genetic and phenotypic variation within and among isolated headwater Brook Trout populations Neutral genetic and phenotypic variation within and among isolated headwater Brook Trout populations

Isolated populations are challenging to manage and conserve as they are particularly vulnerable to genetic drift, allelic fixation, inbreeding, and may express markedly reduced phenotypic variability. We sought to improve our understanding of how spatial isolation, occupancy range, and restricted gene flow influence contemporary phenotypic variation within and among native populations of...
Authors
T. Casey Weathers, David C. Kazyak, Jay R. Stauffer, Matt A. Kulp, Steve E. Moore, Tim L. King, John E. Carlson

Geomorphometry in landscape ecology: Issues of scale, physiography, and application Geomorphometry in landscape ecology: Issues of scale, physiography, and application

Topographic measures are frequently used in a variety of landscape ecology applications, in their simplest form as elevation, slope, and aspect, but increasingly more complex measures are being employed. We explore terrain metric similarity with changes in scale, both grain and extent, and examine how selecting the best measures is sensitive to changes in application. There are three...
Authors
Kirsten E. Ironside, David J. Mattson, Terence R. Arundel, Tad Theimer, Brandon Holton, Michael Peters, Thomas C. Edwards, Jered R. Hansen

Effects of formaldehyde on nitrification in biofilters of small‐scale recirculating systems Effects of formaldehyde on nitrification in biofilters of small‐scale recirculating systems

Florfenicol (Aquaflor®) is the only U.S. Food and Drug Administration (FDA) approved drug for treating diseased fish reared in recirculating aquaculture systems (RAS). Treating diseased fish in RAS is challenging because of the potential to damage nitrifying bacteria in the biofilters. Impaired nitrification can lead to concentrations of ammonia and nitrite that compromise fish welfare...
Authors
Kim T. Fredricks, Aaron R. Cupp, Susan M. Schleis, Richard A. Erickson, Mark P. Gaikowski

Genetic diversity and structure from Antillean manatee (Trichechus manatus manatus) in the southern Gulf of Mexico: Comparison between connected and isolated populations Genetic diversity and structure from Antillean manatee (Trichechus manatus manatus) in the southern Gulf of Mexico: Comparison between connected and isolated populations

Antillean manatees (Trichechus manatus manatus), a subspecies of the West Indian manatee, is listed as endangered species in the Red List of Threatened Species of the International Union for Conservation of Nature. The aims of this research were to survey on the possible regional genetic structure in the southern Gulf of Mexico and to compare genetic status of a landlocked population in...
Authors
Guadalupe Gomez-Carrasco, Julia Maria Lesher-Gordillo, Leon David Olivera-Gomez, Robert K. Bonde, Stefan Arriaga-Weiss, Raymundo Hernandez-Martinez, Guillermo Castanon-Najera, Darwin Jimenez-Dominguez, Armando Romo-Lopez, Alberto Delgado-Estrella

Conflicting messages about camping near waterbodies in wilderness: A review of the scientific basis and need for flexibility Conflicting messages about camping near waterbodies in wilderness: A review of the scientific basis and need for flexibility

The preceding article by C. B. Griffin examines the differences in recommended camping distance from waterbodies from a perspective that there should be consistency between the guidance provided by land management agencies and low impact education and communication programs, such as Leave No Trace and Tread Lightly. We concur that regulatory and messaging consistency is a beneficial...
Authors
Jeffrey L. Marion, Jeremy Wimpey, Ben Lawhorn

Understanding and mitigating wilderness therapy impacts: The Grand Staircase-Escalante National Monument case study Understanding and mitigating wilderness therapy impacts: The Grand Staircase-Escalante National Monument case study

Studies demonstrate that wilderness therapy programs can be beneficial for participants; however, little research has explored the ecological impacts of these programs. A prominent wilderness therapy organization utilizes vast tracts of the Grand Staircase-Escalante National Monument (GSENM) for programming. This study examines the specific ecological impacts stemming from the program in...
Authors
Amelia Romo, Jeffrey L. Marion, Jeremy Wimpey, Derrick Taff, Forrest Schwartz
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