Publications
This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.
Filter Total Items: 42999
Extensive shared polymorphism at non-MHC immune genes in recently diverged North American prairie grouse Extensive shared polymorphism at non-MHC immune genes in recently diverged North American prairie grouse
Gene polymorphisms shared between recently diverged species are thought to be widespread and most commonly reflect introgression from hybridization or retention of ancestral polymorphism through incomplete lineage sorting. Shared genetic diversity resulting from incomplete lineage sorting is usually maintained for a relatively short period of time, but under strong balancing selection it...
Authors
Piotr Minias, Zachary W. Bateson, Linda A. Whittingham, Jeff A. Johnson, Sara J. Oyler-McCance, Peter O. Dunn
Facultative parasitism by the bivalve Kurtiella pedroana in the sand crab Emerita analoga Facultative parasitism by the bivalve Kurtiella pedroana in the sand crab Emerita analoga
It is rare that an organism capable of independent or commensalistic existence can also become endoparasitic on a host. In this study, we documented a potential step toward parasitism in the commensal clam Kurtiella pedroana (Bivalvia: Galeommatoidea). Galeommatoideans are known commensals of various invertebrates, including crustaceans. Emerita analoga (Decapoda: Hippidae) is an...
Authors
Ritin Bhaduri, Paul Valentich-Scott, Mark Hilgers, Rajvir Singh, Mikaila Hickman, Kevin D. Lafferty
Food abundance, prey morphology, and diet specialization influence individual sea otter tool use Food abundance, prey morphology, and diet specialization influence individual sea otter tool use
Sea otters are well-known tool users, employing objects such as rocks or shells to break open invertebrate prey. We used a series of generalized linear mixed effect models to examine observational data on prey capture and tool use from 211 tagged individuals from 5 geographically defined study areas throughout the sea otter’s range in California. Our best supported model was able to...
Authors
Jessica A. Fujii, Katherine Ralls, M. Tim Tinker
Standardization and application of an index of community integrity for waterbirds in the Chesapeake Bay, USA Standardization and application of an index of community integrity for waterbirds in the Chesapeake Bay, USA
In recent decades, there has been increasing interest in the application of ecological indices to assess ecosystem condition in response to anthropogenic activities. An Index of Waterbird Community Integrity was previously developed for the Chesapeake Bay, USA. However, the scoring criteria were not defined well enough to generate scores for new species that were not observed in the...
Authors
Diann J. Prosser, Jessica L. Nagel, Paul Marban, Luo Ze, Daniel D. Day, R. Michael Erwin
The extremely divergent maternally- and paternally-transmitted mitochondrial genomes are co-expressed in somatic tissues of two freshwater mussel species with doubly uniparental inheritance of mtDNA The extremely divergent maternally- and paternally-transmitted mitochondrial genomes are co-expressed in somatic tissues of two freshwater mussel species with doubly uniparental inheritance of mtDNA
Freshwater mussel species with doubly uniparental inheritance (DUI) of mtDNA are unique because they are naturally heteroplasmic for two extremely divergent mtDNAs with ~50% amino acid differences for protein-coding genes. The paternally-transmitted mtDNA (or M mtDNA) clearly functions in sperm in these species, but it is still unknown whether it is transcribed when present in male or...
Authors
Sophie Breton, Karim Bouvet, Gabrielle Auclair, Stephanie Ghazal, Bernard E. Sietman, Nathan A. Johnson, Stefano Bettinazzi, Donald T. Dtewart, Davide Guerra
Characterizing Golden Eagle risk to lead and anticoagulant rodenticide exposure: A review Characterizing Golden Eagle risk to lead and anticoagulant rodenticide exposure: A review
Contaminant exposure is among the many threats to Golden Eagle (Aquila chrysaetos) populations throughout North America, particularly lead poisoning and anticoagulant rodenticides (AR). These threats may act in concert with others (e.g., lead poisoning and trauma associated with striking objects) to exacerbate risk. Golden Eagles are skilled hunters but also exploit scavenging...
Authors
Garth Herring, Collin A. Eagles-Smith, Jeremy A. Buck
Comparison of four modeling tools for the prediction of potential distribution for non-indigenous weeds in the United States Comparison of four modeling tools for the prediction of potential distribution for non-indigenous weeds in the United States
This study compares four models for predicting the potential distribution of non-indigenous weed species in the conterminous U.S. The comparison focused on evaluating modeling tools and protocols as currently used for weed risk assessment or for predicting the potential distribution of invasive weeds. We used six weed species (three highly invasive and three less invasive non-indigenous...
Authors
Roger Magarey, Leslie Newton, Seung C. Hong, Yu Takeuchi, Dave Christie, Catherine S. Jarnevich, Lisa Kohl, Martin Damus, Steven I. Higgins, Leah Miller, Karen Castro, Amanda M. West, John Hastings, Gericke Cook, John Kartesz, Anthony Koop
Fatal attraction? Intraguild facilitation and suppression among predators Fatal attraction? Intraguild facilitation and suppression among predators
Competition and suppression are recognized as dominant forces that structure predator communities. Facilitation via carrion provisioning, however, is a ubiquitous interaction among predators that could offset the strength of suppression. Understanding the relative importance of these positive and negative interactions is necessary to anticipate community-wide responses to apex predator...
Authors
Kelly J. Sivy, Casey B. Pozzanghera, James B. Grace, Laura R. Prugh
Seasonality of intraspecific mortality by gray wolves Seasonality of intraspecific mortality by gray wolves
Of 41 adult wolf-killed gray wolves (Canis lupus) and 10 probably or possibly killed by wolves from 1968 through 2014 in the Superior National Forest (SNF) in northeastern Minnesota, most were killed in months leading up to and immediately following the breeding season, which was primarily February. This finding is similar to a published sample from Denali National Park, and the...
Authors
L. David Mech, Shannon Barber-Meyer
No evidence for ecological segregation protecting native trout from invasive hybridization No evidence for ecological segregation protecting native trout from invasive hybridization
We appreciate the comments of Young et al. (2017) on our recent paper (Muhlfeld et al., 2017) concerning spatiotemporal dynamics of hybridization between native westslope cutthroat trout (Oncorhynchus clarkii lewisi; WCT) and introduced coastal rainbow trout (Oncorhynchus mykiss irideus; RBT). Nevertheless, we believe there is no evidence for “ecological segregation” protecting WCT from
Authors
Ryan Kovach, Clint C. Muhlfeld, Robert K. Al-Chokhachy, Stephen J. Amish, Jeffrey L. Kershner, Robb F. Leary, Winsor H. Lowe, Gordon Luikart, Phil Matson, David Schmetterling, Bradley Shepard, Peter A. H. Westley, Diane Whited, Andrew R. Whiteley, Fred W. Allendorf
Glacial conditioning of stream position and flooding in the braid plain of the Exit Glacier foreland, Alaska Glacial conditioning of stream position and flooding in the braid plain of the Exit Glacier foreland, Alaska
Flow spilling out of an active braid plain often signals the onset of channel migration or avulsion to previously occupied areas. In a recently deglaciated environment, distinguishing between shifts in active braid plain location, considered reversible by fluvial processes at short timescales, and more permanent glacier-conditioned changes in stream position can be critical to...
Authors
Janet H. Curran, Michael G. Loso, Haley B. Williams
Observations of raccoon (Procyon lotor) predation on the invasive Maculata apple snail (Pomacea maculata) in southern Louisiana Observations of raccoon (Procyon lotor) predation on the invasive Maculata apple snail (Pomacea maculata) in southern Louisiana
We used camera traps to determine which predators were responsible for depredated Pomacea maculata (Maculata Apple Snail) shells at 2 different study sites. Evidence of predation at these sites included operculums near the shells with a small amount of flesh attached and shells accumulating a meter or more from the water’s edge with no evidence of recent flooding. In both locations, the...
Authors
Jacoby Carter, Sergio Merino, Drew Prejean, Gary LaFleur