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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 42768

Occurrence of Batrachochytrium dendrobatidis in anurans of the Mediterranean region of Baja California, México Occurrence of Batrachochytrium dendrobatidis in anurans of the Mediterranean region of Baja California, México

Chytridiomycosis is caused by the fungal pathogen Batrachochytrium dendrobatidis (Bd) and is regarded as one of the most significant threats to global amphibian populations. In México, Bd was first reported in 2003 and has now been documented in 13 states. We visited 33 localities and swabbed 199 wild-caught anurans from 7 species (5 native, 2 exotic) across the Mediterranean region of...
Authors
Anny Peralta-Garcia, Andrea J. Adams, Cheryl J. Briggs, Patricia Galina-Tessaro, Jorge H. Valdez-Villavicencio, Bradford Hollingsworth, H. Bradley Shaffer, Robert N. Fisher

Artificial light at night confounds broad-scale habitat use by migrating birds Artificial light at night confounds broad-scale habitat use by migrating birds

With many of the world's migratory bird populations in alarming decline, broad-scale assessments of responses to migratory hazards may prove crucial to successful conservation efforts. Most birds migrate at night through increasingly light-polluted skies. Bright light sources can attract airborne migrants and lead to collisions with structures, but might also influence selection of...
Authors
James D. McLaren, Jeffrey J. Buler, Tim Schreckengost, Jaclyn A. Smolinsky, Matthew Boone, E. Emiel van Loon, Deanna K. Dawson, Eric L. Walters

Conservation and restoration of mangroves: Global status, perspectives, and prognosis Conservation and restoration of mangroves: Global status, perspectives, and prognosis

Mangrove forests provide critical services around the globe to both human populations and the ecosystems they occupy. However, losses of mangrove habitat of more than 50% have been recorded in some parts of the world, and these losses are largely attributable to human activities. The importance of mangroves and the threats to their persistence have long been recognized, leading to...
Authors
Stephanie S. Romanach, Donald L. DeAngelis, Hock Lye Koh, Yuhong Li, Su Yean Teh, Raja Sulaiman Raja Barizan, Lu Zhai

Evidence of repeated long-distance movements by lake charr Salvelinus namaycush in Lake Huron Evidence of repeated long-distance movements by lake charr Salvelinus namaycush in Lake Huron

Movements and dispersal distances of acoustically-tagged adult lake charr Salvelinus namaycush were estimated based on detections at acoustic receivers in Lake Huron during 2010–2014. Most lake charr were detected only at receivers proximate to their release location or were not detected at all, but 3–9% of tagged lake charr were detected at receivers located over 100 km from their...
Authors
Stephen Riley, Tom Binder, Taaja R. Tucker, Charles C. Krueger

Effects of host species and environment on the skin microbiome of Plethodontid salamanders Effects of host species and environment on the skin microbiome of Plethodontid salamanders

The amphibian skin microbiome is recognized for its role in defence against pathogens, including the deadly fungal pathogen Batrachochytrium dendrobatidis (Bd). Yet, we have little understanding of evolutionary and ecological processes that structure these communities, especially for salamanders and closely related species. We investigated patterns in the distribution of bacterial...
Authors
Carly R. Muletz-Wolz, Stephanie A. Yarwood, Evan H. Campbell Grant, Robert C. Fleischer, Karen R. Lips

On the exchange of sensible and latent heat between the atmosphere and melting snow On the exchange of sensible and latent heat between the atmosphere and melting snow

The snow energy balance is difficult to measure during the snowmelt period, yet critical for predictions of water yield in regions characterized by snow cover. Robust simplifications of the snowmelt energy balance can aid our understanding of water resources in a changing climate. Research to date has demonstrated that the net turbulent flux (FT) between a melting snowpack and the...
Authors
Paul C. Stoy, Erich H. Peitzsch, David J. A. Wood, Daniel Rottinghaus, Georg Wohlfahrt, Michael Goulden, Helen Ward

Improving estimation of flight altitude in wildlife telemetry studies Improving estimation of flight altitude in wildlife telemetry studies

Altitude measurements from wildlife tracking devices, combined with elevation data, are commonly used to estimate the flight altitude of volant animals. However, these data often include measurement error. Understanding this error may improve estimation of flight altitude and benefit applied ecology. There are a number of different approaches that have been used to address this...
Authors
Sharon A. Poessel, Adam E. Duerr, Jonathan C. Hall, Melissa A. Braham, Todd E. Katzner

Imperfect pathogen detection from non-invasive skin swabs biases disease inference Imperfect pathogen detection from non-invasive skin swabs biases disease inference

1. Conservation managers rely on accurate estimates of disease parameters, such as pathogen prevalence and infection intensity, to assess disease status of a host population. However, these disease metrics may be biased if low-level infection intensities are missed by sampling methods or laboratory diagnostic tests. These false negatives underestimate pathogen prevalence and overestimate...
Authors
Graziella V. DiRenzo, Evan H. Campbell Grant, Ana V. Longo, Christian Che-Castaldo, Kelly R. Zamudio, Karen Lips

Delineating and identifying long-term changes in the whooping crane (Grus americana) migration corridor Delineating and identifying long-term changes in the whooping crane (Grus americana) migration corridor

Defining and identifying changes to seasonal ranges of migratory species is required for effective conservation. Historic sightings of migrating whooping cranes (Grus americana) have served as sole source of information to define a migration corridor in the Great Plains of North America (i.e., Canadian Prairies and United States Great Plains) for this endangered species. We updated this...
Authors
Aaron T. Pearse, Matt Rabbe, Lara M. Juliusson, Mark T. Bidwell, Lea Craig-Moore, David A. Brandt, Wade C. Harrell

Evaluating GPS biologging technology for studying spatial ecology of large constricting snakes Evaluating GPS biologging technology for studying spatial ecology of large constricting snakes

Background: GPS telemetry has revolutionized the study of animal spatial ecology in the last two decades. Until recently, it has mainly been deployed on large mammals and birds, but the technology is rapidly becoming miniaturized, and applications in diverse taxa are becoming possible. Large constricting snakes are top predators in their ecosystems, and accordingly they are often a...
Authors
Brian Smith, Kristen M. Hart, Frank J. Mazzotti, Mathieu Basille, Christina M. Romagosa

Genomic evolution, recombination, and inter-strain diversity of chelonid alphaherpesvirus 5 from Florida and Hawaii green sea turtles with fibropapillomatosis Genomic evolution, recombination, and inter-strain diversity of chelonid alphaherpesvirus 5 from Florida and Hawaii green sea turtles with fibropapillomatosis

Chelonid alphaherpesvirus 5 (ChHV5) is a herpesvirus associated with fibropapillomatosis (FP) in sea turtles worldwide. Single-locus typing has previously shown differentiation between Atlantic and Pacific strains of this virus, with low variation within each geographic clade. However, a lack of multi-locus genomic sequence data hinders understanding of the rate and mechanisms of ChHV5
Authors
Cheryl L. Morrison, Luke R. Iwanowicz, Thierry M. Work, Elizabeth Fahsbender, Mya Breitbart, Cynthia R. Adams, Deborah D. Iwanowicz, Lakyn Sanders, Mathias Ackermann, Robert S. Cornman

Foraging and fasting can influence contaminant concentrations in animals: an example with mercury contamination in a free-ranging marine mammal Foraging and fasting can influence contaminant concentrations in animals: an example with mercury contamination in a free-ranging marine mammal

Large fluctuations in animal body mass in relation to life-history events can influence contaminant concentrations and toxicological risk. We quantified mercury concentrations in adult northern elephant seals (Mirounga angustirostris) before and after lengthy at sea foraging trips (n = 89) or fasting periods on land (n = 27), and showed that mercury concentrations in blood and muscle...
Authors
Sarah H. Peterson, Joshua T. Ackerman, Daniel E. Crocker, Daniel P. Costa
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