Data

Viral erythrocytic necrosis (VEN) is a disease of marine and anadromous fishes, which is poorly understood, largely because its causative iridovirus, erythrocytic necrosis virus (ENV), is intractable to cell culture. Natural VEN epizootics and observations studies in wild populations suggest that temperature may be an important disease cofactor. Here, a controlled laboratory exposure...

This software contains four separate R scripts and one Matlab script that comprise an analysis to estimate the posterior probability of pathogen presence when sample misclassification and partial observations occur. We develop a Bayesian hierarchal framework that accommodates false negative, false positive, and uncertain detections and apply this framework to a case study of the fungal...

We examined nest survival of Greater Sage-grouse (Centrocercus urophasianus; hereafter, sage-grouse) in relation to fine-scale habitat patterns that influenced nest site selection, using data from nests of telemetered females at 17 sites across 6 years in Nevada and northeastern California, USA. Importantly, sites spanned mesic and xeric average precipitation conditions and concomitant...

These data were compiled to assess the size, structure, and health of various populations of Actinemys pallida along the length of the Mojave River. Objective(s) of our study were to determine the extent of injuries and abnormalities within our Actinemys pallida populations (including statistical analyses comparing injuries with turtle sex and size) and estimate the cause(s) of the...

The R package inlcolor provides access to a variety color schemes. Used to support packages and scripts written by researchers at the United States Geological Survey (USGS) Idaho National Laboratory Project Office (INLPO). Key features of this package are (1) a simple and consistent API, (2) support for qualitative, diverging, and sequential color schemes, (3) support for combining color...

This data release contains the model inputs, outputs, and source code (written in R) for the boosted regression tree (BRT) and artificial neural network (ANN) models developed for four sites in Upper Klamath Lake which were used to simulate daily maximum pH and daily minimum dissolved oxygen (DO) from May 18th to October 4th in 2005-12 and 2015-19 at four sites, and to evaluate variable...

Canadian discrete water quality data and daily streamflow records were evaluated using the Weighted Regression on Time, Discharge, and Seasons (WRTDS) model implemented with the EGRET R package (Hirsch et al. 2010, Hirsch and De Cicco 2015). Models were used to estimate loads of solutes and evaluate trends for three constituents of interest (selenium, nitrogen, and sulfate). Six models...

This data release complements Murray et al. (2023) which presents a framework for incorporating earthquake magnitude estimates based on real-time Global Navigation Satellite System (GNSS) data into the ShakeAlert® earthquake early warning system for the west coast of the United States. Murray et al. (2023) assess the impact of time-dependent noise in GNSS real-time position estimates on...

Chronic wasting disease (CWD) is a transmissible spongiform encephalopathy that was first detected in captive cervids in Colorado, United States (US) in 1967, but has since spread into free-ranging white-tailed deer (Odocoileus virginianus) populations across the US and Canada. In some areas, the disease is considered endemic in wild deer populations, and governmental wildlife agencies...

A software library and set of tools to support ingestion, processing, and analysis of planetary science data. Version 8.0.2

This repository contains analysis codes to interpolate missing data from the Upper Mississippi River LTRM dataset.

This is a shapefile of points summarizing inundation metrics and geomorphic variables for bends in the downstream-most 800 km of the Lower Missouri River. Points are located at the centroids of 10-km bends of the river. The metrics were developed through analysis of inundation maps calculated from a 1-dimensional hydraulic model for the channel and floodplain. Water-surface elevations...