Publications
Browse publications authored by our scientists. Publications available are: USGS-authored journal articles, series reports, book chapters, other government publications, and more. **Disclaimer: The views expressed in Non-USGS publications are those of the author and do not represent the views of the USGS, Department of the Interior, or the U.S. Government.
Filter Total Items: 5022
Importance of a lake-wetland complex for a resilient Walleye fishery Importance of a lake-wetland complex for a resilient Walleye fishery
Wetlands serve as unique habitats that can support high biodiversity. Large-scale loss of wetland habitats can threaten important linkages between lake and wetland habitats that could affect diversity and growth of aquatic organisms. In this study, we compare prey diversity and abundance as well as Walleye (Sander vitreus) diets and condition in a large glacial lake (Lake Kampeska, South...
Authors
Logan M. Cutler, Steven R. Chipps, Brian G. Blackwell, Alison A. Coulter
An integrative approach to assessing bridle shiner (Notropis bifrenatus) distribution using environmental DNA and traditional techniques An integrative approach to assessing bridle shiner (Notropis bifrenatus) distribution using environmental DNA and traditional techniques
The bridle shiner (Notropis bifrenatus) is a small cyprinid native to the eastern United States and Canada. Bridle shiner populations have declined across their range, and the species now receives concern status or legal protection in 13 states and two provinces. Bridle shiners were historically found in southern and western Maine in densely vegetated, shallow habitats along the...
Authors
Lara S. Katz, Stephen M. Jr. Coghlan, Erik J. Blomberg, Michael T. Kinnison, Geneva York, Joseph D. Zydlewski
Intraguild interactions and abiotic conditions mediate occupancy of mammalian carnivores: Co-occurrence of coyotes–fishers–martens Intraguild interactions and abiotic conditions mediate occupancy of mammalian carnivores: Co-occurrence of coyotes–fishers–martens
The widespread eradication of large carnivores and subsequent expansion of top mesopredators has the potential to impact species and community interactions with ecosystem-wide implications. An example of these trophic dynamics is the widespread establishment of coyotes following extirpation of wolves and mountain lions in eastern North America. Here, we examined occupancy of three...
Authors
Joshua P. Twining, Jennifer L. Brazeal, Paul G. Jensen, Angela K. Fuller
Predicting the odds of chronic wasting disease with Habitat Risk software Predicting the odds of chronic wasting disease with Habitat Risk software
Chronic wasting disease (CWD) is a transmissible spongiform encephalopathy that was first detected in captive cervids in Colorado, United States (US) in 1967, but has since spread into free-ranging white-tailed deer (Odocoileus virginianus) across the US and Canada as well as to Scandinavia and South Korea. In some areas, the disease is considered endemic in wild deer populations, and...
Authors
W. David Walter, Brenda J. Hanley, Cara E. Them, Corey I. Mitchell, James Kelly, Daniel Grove, Nicholas Hollingshead, Rachel C. Abbott, Krysten L. Schuler
Integrating presence-only and detection/non-detection data to estimate distributions and expected abundance of difficult-to-monitor species on a landscape-scale Integrating presence-only and detection/non-detection data to estimate distributions and expected abundance of difficult-to-monitor species on a landscape-scale
Estimating species distribution and abundance is foundational to effective management and conservation.Using an integrated species distribution model that combines presence-only data from various sources with detection/non-detection data from structured surveys, we estimated the distribution and expected abundance of three difficult-to-monitor mammals of management concern across New...
Authors
Joshua P. Twining, Angela K. Fuller, Catherine C. Sun, Camilo A. Calderon-Acevedo, Matthew D. Schlesinger, Melanie Berger, David Kramer, Jacqueline L. Frair
Quantifying uncertainty when extrapolating the relationship between snorkel counts and mark-recapture estimates of juvenile salmonids Quantifying uncertainty when extrapolating the relationship between snorkel counts and mark-recapture estimates of juvenile salmonids
Snorkel surveys are frequently used to monitor stream-dwelling fish. Inferring local abundance from snorkel surveys is complicated by two primary factors: variable fish detection probabilities and the relative abundance of fish in habitat types below the recommended minimum depth for snorkeling. We examine these factors across three salmonid species (Oncorhynchus spp.), 4 years, and 113...
Authors
Matthew Richard Falcy, Ronald J. Constable Jr.
Treed Gaussian processes for animal movement modeling Treed Gaussian processes for animal movement modeling
Wildlife telemetry data may be used to answer a diverse range of questions relevant to wildlife ecology and management. One challenge to modeling telemetry data is that animal movement often varies greatly in pattern over time, and current continuous-time modeling approaches to handle such nonstationarity require bespoke and often complex models that may pose barriers to practitioner
Authors
Camille J. Rieber, Trevor J. Hefley, David A. Haukos
Broad-scale changes in lesser prairie-chicken habitat Broad-scale changes in lesser prairie-chicken habitat
Lesser prairie-chicken (Tympanuchus pallidicinctus) populations of in the Sand Sagebrush Prairie Ecoregion of southwest Kansas and southeast Colorado, USA, have declined sharply since the mid-1980s. Decreased quality and availability of habitat are believed to be the main drivers of declines. Our objective was to reconstruct broad-scale change in the ecoregion since 1985 as a potential...
Authors
Megan P. Vhay, David A. Haukos, Daniel S. Sullins, Mindy B. Rice
Evaluating satellite-transmitter backpack-harness effects on greater sage-grouse survival and device retention in the Great Basin Evaluating satellite-transmitter backpack-harness effects on greater sage-grouse survival and device retention in the Great Basin
Wildlife tracking studies have become ubiquitous in ecology and now provide previously unobtainable data regarding individual movement, vital rates, and population demographics. However, tracking devices can potentially reduce survival of study subjects, generating biases in the vital rates they seek to measure. Previous studies have found that greater sage-grouse (Centrocercus...
Authors
Carl G. Lundblad, Christopher R. Anthony, Tyler Dungannon, Kimberly A. Haab, Elizabeth M. Schuyler, Chelsea E. Sink, Katie Dugger, Christian A. Hagen
Comparing risk of chronic wasting disease occurrence using Bayesian hierarchical spatial models and different surveillance types Comparing risk of chronic wasting disease occurrence using Bayesian hierarchical spatial models and different surveillance types
Spatial modeling of wildlife diseases can be used to describe patterns of disease risk, understand biological mechanisms of disease occurrence, and for spatial prediction. Risk of wildlife disease occurrence in relation to environmental variables is often modeled and predicted using Markov chain Monte Carlo (MCMC) methods, which are unsuitable for large datasets and those covering large...
Authors
Kristin J. Bondo, Christopher S. Rosenberry, David Stainbrook, W. David Walter
Prion seeding activity in plant tissues detected by RT-QuIC Prion seeding activity in plant tissues detected by RT-QuIC
Prion diseases such as scrapie, bovine spongiform encephalopathy (BSE), and chronic wasting disease (CWD) affect domesticated and wild herbivorous mammals. Animals afflicted with CWD, the transmissible spongiform encephalopathy of cervids (deer, elk, and moose), shed prions into the environment, where they may persist and remain infectious for years. These environmental prions may remain...
Authors
Kate Burgener, Stuart Siegfried Lichtenberg, Daniel P. Walsh, Heather Inzalaco, Aaron Lomax, Joel Pedersen
Behavioral trade-offs and multitasking by elk in relation to predation risk from Mexican gray wolves Behavioral trade-offs and multitasking by elk in relation to predation risk from Mexican gray wolves
Predator non-consumptive effects (NCE) can alter prey foraging time and habitat use, potentially reducing fitness. Prey can mitigate NCEs by increasing vigilance, chewing-vigilance synchronization, and spatiotemporal avoidance of predators. We quantified the relationship between Mexican wolf (Canis lupus baileyi) predation risk and elk (Cervus canadensis) behavior. We conducted...
Authors
Zachary J. Farley, Cara J. Thompson, Scott T. Boyle, Nicole M. Tatman, James W. Cain