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Publications

Browse publications authored by our scientists.  Publications available are: USGS-authored journal articles, series reports, book chapters, other government publications, and more. 

 

**Disclaimer: The views expressed in Non-USGS publications are those of the author and do not represent the views of the USGS, Department of the Interior, or the U.S. Government.

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The importance of phenology and thermal exposure to early life history success of nonnative Smallmouth Bass in the Yellowstone River The importance of phenology and thermal exposure to early life history success of nonnative Smallmouth Bass in the Yellowstone River

Knowledge of potential spread by introduced species is critical to effective management and conservation. The Smallmouth Bass Micropterus dolomieu is an example of a fish that has been introduced globally, often spreads after introduction, and has substantial predatory impacts on fish assemblages. Nonnative Smallmouth Bass in the free-flowing Yellowstone River, Montana, have expanded...
Authors
Nicholas S. Voss, Robert K. Al-Chokhachy, Adam Sepulveda, Christine E. Verhille, Michael P. Ruggles, Alexander V. Zale

Asking nicely: Best practices for requesting data Asking nicely: Best practices for requesting data

Compiling disparate datasets into publicly available composite databases helps natural resource communities explore ecological trends and effectively manage across spatiotemporal scales. Though some studies have reported on the database construction phase, fewer have evaluated the data acquisition and distribution process. To facilitate future data sharing collaborations, Louisiana State
Authors
Steve R. Midway, Nicholas A. Sievert, Abigail Lynch, Joanna B. Whittier, Kevin L. Pope

Water-level fluctuations and water temperature effects on young-of-year Largemouth Bass in a southwest irrigation reservoir Water-level fluctuations and water temperature effects on young-of-year Largemouth Bass in a southwest irrigation reservoir

The effects of a warming climate will alter the hydrological cycles of arid southwestern U.S. reservoirs which primarily support agricultural needs, provide flood control, and generate hydroelectric power while secondarily supporting fish communities and sport fishing opportunities. The success of littoral spawning fishes depends on the timing and variability of water levels. The onset...
Authors
Alexander Vaisvil, Colleen A. Caldwell, Eric Frey

Species distributions and the recognition of risk in restoration planning: A case study of salmonid fishes Species distributions and the recognition of risk in restoration planning: A case study of salmonid fishes

One of the risks faced by habitat restoration practitioners is whether habitats included in restoration planning will be used by the target species or, conversely, whether habitats excluded from restoration planning would have benefited the target species. With the goal of providing a quantitative decision-making approach that represented varying levels of risk tolerance, we used...
Authors
Eric J. Walther, Mara S. Zimmerman, Jeffrey A. Falke, Peter A. H. Westley

Hybridization decreases native cutthroat trout reproductive fitness Hybridization decreases native cutthroat trout reproductive fitness

Examining natural selection in wild populations is challenging, but crucial to understanding many ecological and evolutionary processes. Additionally, in hybridizing populations, natural selection may be an important determinant of the eventual outcome of hybridization. We characterized several components of relative fitness in hybridizing populations of Yellowstone cutthroat trout and...
Authors
William C. Rosenthal, John M. Fennell, Elizabeth G. Mandeville, Jason C. Burckhardt, Annika W. Walters, Catherine E. Wagner

Progression of infection and detection of Pseudoloma neurophilia in zebrafish Danio rerio Hamilton by PCR and histology Progression of infection and detection of Pseudoloma neurophilia in zebrafish Danio rerio Hamilton by PCR and histology

Pseudoloma neurophilia is a critical threat to the zebrafish (Danio rerio) model, as it is the most common infectious agent found in research facilities. In this study, our objectives were two-fold: (1) compare the application of diagnostic tools for P. neurophilia and (2) track the progression of infection using PCR and histology. The first experiment showed that whole-body analysis by...
Authors
Corbin J. Schuster, Taylor Kreul, Colleen E. Al-Samarrie, James T. Peterson, Justin L. Sanders, Michael L. Kent

Integrating monitoring and optimization modeling to inform flow decisions for Chinook salmon smolts Integrating monitoring and optimization modeling to inform flow decisions for Chinook salmon smolts

Monitoring is usually among the first actions taken to help inform recovery planning for declining species, but these data are rarely used formally to inform conservation decision making. For example, Central Valley Chinook salmon were once abundant, but anthropogenic activities have led to widespread habitat loss and degradation resulting in significant population declines. Monitoring...
Authors
Patti J. Wohner, Adam Duarte, John Wikert, Brad Cavallo, Steven C. Zeug, James T. Peterson

Informing surveillance through the characterization of outbreak potential of chronic wasting disease in white-tailed deer Informing surveillance through the characterization of outbreak potential of chronic wasting disease in white-tailed deer

Understanding the role that an environmental prion reservoir plays in the outbreak dynamics of chronic wasting disease (CWD) in free ranging white-tailed deer (Odocoileus virginianus) is critical for the allocation of disease surveillance resources by state and provincial wildlife agencies. We hypothesized that demographic, ecological, and epidemiological configurations naturally...
Authors
Brenda J. Hanley, Michelle Carstensen, Daniel P. Walsh, Sonja A. Christensen, Daniel J. Storm, James G. Boothe, Joseph Guinness, Cara E. Them, Md Sohel Ahmed, Krysten L. Schuler

Endemic Guadalupe bass (Micropterus treculii) are supported by isotopically distinct resources in tributary versus mainstem river food webs Endemic Guadalupe bass (Micropterus treculii) are supported by isotopically distinct resources in tributary versus mainstem river food webs

We used stable isotope analysis to investigate differences in Guadalupe bass (Micropterus treculii) resource use that might be associated with population-level variation in mainstem river versus tributary stream habitats. Guadalupe bass from mainstem sites had higher δ13C and δ15N values compared to those collected in tributaries, likely reflecting greater importance of algae as a basal...
Authors
Allison A. Pease, Jessica E. Pease, Preston T. Bean, Timothy B. Grabowski

Temporal segregation in spawning between native Yellowstone cutthroat trout and introduced rainbow trout Temporal segregation in spawning between native Yellowstone cutthroat trout and introduced rainbow trout

Hybridisation with introduced taxa poses a threat to native fish populations. Mechanisms of reproductive isolation can limit or prevent hybridisation between closely related species. Understanding how these mechanisms interact between the same species across geographically distinct occurrences of secondary contact, and how regional factors influence them, can inform our understanding of
Authors
John M. Fennell, William C. Rosenthal, Catherine E. Wagner, Jason C. Burckhardt, Annika W. Walters

Population genetics reveals bidirectional fish movement across the Continental Divide via an interbasin water transfer Population genetics reveals bidirectional fish movement across the Continental Divide via an interbasin water transfer

Interbasin water transfers are becoming an increasingly common tool to satisfy municipal and agricultural water demand, but their impacts on movement and gene flow of aquatic organisms are poorly understood. The Grand Ditch is an interbasin water transfer that diverts water from tributaries of the upper Colorado River on the west side of the Continental Divide to the upper Cache la...
Authors
Audrey Harris, Sara J. Oyler-McCance, Jennifer A. Fike, Matthew P Fairchild, Christopher M Kennedy, Harry J Crockett, Dana L. Winkelman, Yoichiro Kanno

Intrabrood variation in nestling mass among three sagebrush-associated songbirds Intrabrood variation in nestling mass among three sagebrush-associated songbirds

The young of some altricial bird species hatch asynchronously, which can lead to considerable size differences among siblings. Nestling traits such as body mass, moreover, can carry over and influence post-fledging survival. Despite the potential importance of nestling mass for reproductive outcomes, however, variation in nestling mass and relationships with brood size has been described...
Authors
Ashleigh M. Rhea, Jason D. Carlisle, Anna D. Chalfoun
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