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Publications

Dive into our publications and explore the science from the Environmental Health Program (Toxic Substances Hydrology and Contaminant Biology).

Filter Total Items: 4097

A noninvasive, direct real-time PCR method for sex determination in multiple avian species A noninvasive, direct real-time PCR method for sex determination in multiple avian species

Polymerase chain reaction (PCR)-based methods to determine the sex of birds are well established and have seen few modifications since they were first introduced in the 1990s. Although these methods allowed for sex determination in species that were previously difficult to analyse, they were not conducive to high-throughput analysis because of the laboriousness of DNA extraction and gel
Authors
Jessica L. Brubaker, Natalie K. Karouna-Renier, Yu Chen, Kathryn Jenko, Daniel T. Sprague, Paula F.P. Henry

A geospatial approach to identify water quality issues for National Wildlife Refuges in Oregon and Washington A geospatial approach to identify water quality issues for National Wildlife Refuges in Oregon and Washington

Many National Wildlife Refuges (Refuges) have impaired water quality resulting from historic and current land uses, upstream sources, and aerial pollutant deposition. Competing duties limit the time available for Refuge staff to identify and evaluate potential water quality issues. As a result, water quality–related issues may not be resolved until a problem has already arisen. This...
Authors
Jo Ellen Hinck, Kimberly Chojnacki, Susan E. Finger, Greg Linder, Kevin Kilbride

Suspended sediment and organic contaminants in the San Lorenzo River, California, water years 2009-2010 Suspended sediment and organic contaminants in the San Lorenzo River, California, water years 2009-2010

This report presents analyses of suspended sediment and organic contaminants measured during a two-year study of the San Lorenzo River, central California, which discharges into the Pacific Ocean within the Monterey Bay National Marine Sanctuary. Most suspended-sediment transport occurred during flooding caused by winter storms; 55 percent of the sediment load was transported by the...
Authors
Amy E. Draut, Christopher H. Conaway, Kathy R. Echols, Curt D. Storlazzi, Andrew Ritchie

Estimating occupancy dynamics in an anuran assemblage from Louisiana, USA Estimating occupancy dynamics in an anuran assemblage from Louisiana, USA

Effective monitoring programs are designed to track changes in the distribution, occurrence, and abundance of species. We developed an extension of Royle and Kéry's (2007) single species model to estimate simultaneously temporal changes in probabilities of detection, occupancy, colonization, extinction, and species turnover using data on calling anuran amphibians, collected from 2002 to...
Authors
Susan C. Walls, J. Hardin Waddle, Robert M. Dorazio

Threats of habitat and water-quality degradation to mussel diversity in the Meramec River Basin, Missouri, USA Threats of habitat and water-quality degradation to mussel diversity in the Meramec River Basin, Missouri, USA

The Meramec River Basin in east-central Missouri is an important stronghold for native freshwater mussels (Order: Unionoida) in the United States. Whereas the basin supports more than 40 mussel species, previous studies indicate that the abundance and distribution of most species are declining. Therefore, resource managers have identified the need to prioritize threats to native mussel...
Authors
Jo Ellen Hinck, Christopher G. Ingersoll, Ning Wang, Tom Augspurger, M. Christopher Barnhart, Stephen E. McMurray, Andrew D. Roberts, Lynn Schrader

Borehole geophysical investigation of a formerly used defense site, Machiasport, Maine, 2003-2006 Borehole geophysical investigation of a formerly used defense site, Machiasport, Maine, 2003-2006

The U.S. Geological Survey, in cooperation with the U.S. Army Corps of Engineers, collected borehole geophysical logs in 18 boreholes and interpreted the data along with logs from 19 additional boreholes as part of an ongoing, collaborative investigation at three environmental restoration sites in Machiasport, Maine. These sites, located on hilltops overlooking the seacoast, formerly...
Authors
Carole D. Johnson, Remo A. Mondazzi, Peter K. Joesten

Sediment toxicity test results for the Urban Waters Study 2010, Bellingham Bay, Washington Sediment toxicity test results for the Urban Waters Study 2010, Bellingham Bay, Washington

The Washington Department of Ecology annually determines the quality of recently deposited sediments in Puget Sound as a part of Ecology's Urban Waters Initiative. The annual sediment quality studies use the Sediment Quality Triad (SQT) approach, thus relying on measures of chemical contamination, toxicity, and benthic in-faunal effects (Chapman, 1990). Since 2002, the studies followed a...
Authors
James M. Biedenbach

Biodegradation and attenuation of steroidal hormones and alkylphenols by stream biofilms and sediments Biodegradation and attenuation of steroidal hormones and alkylphenols by stream biofilms and sediments

Biodegradation of select endocrine-disrupting compounds (17β-estradiol, estrone, 17α-ethynylestradiol, 4-nonylphenol, 4-nonylphenolmonoexthoylate, and 4-nonylphenoldiethoxylate) was evaluated in stream biofilm, sediment, and water matrices collected from locations upstream and downstream from a wastewater treatment plant effluent discharge. Both biologically mediated transformation to...
Authors
Jeffrey Writer, Larry B. Barber, Joseph N. Ryan, Paul M. Bradley

Mass of chlorinated volatile organic compounds removed by Pump-and-Treat, Naval Air Warfare Center, West Trenton, New Jersey, 1996-2010 Mass of chlorinated volatile organic compounds removed by Pump-and-Treat, Naval Air Warfare Center, West Trenton, New Jersey, 1996-2010

Pump and Treat (P&T) remediation is the primary technique used to contain and remove trichloroethylene (TCE) and its degradation products cis 1-2,dichloroethylene (cDCE) and vinyl chloride (VC) from groundwater at the Naval Air Warfare Center (NAWC), West Trenton, NJ. Three methods were used to determine the masses of TCE, cDCE, and VC removed from groundwater by the P&T system since it...
Authors
Pierre J. Lacombe

Sediment pore-water toxicity test results and preliminary toxicity identification of post-landfall pore-water samples collected following the Deepwater Horizon oil release, Gulf of Mexico, 2010 Sediment pore-water toxicity test results and preliminary toxicity identification of post-landfall pore-water samples collected following the Deepwater Horizon oil release, Gulf of Mexico, 2010

Pore water from coastal beach and marsh sediments from the northern Gulf of Mexico, pre- and post-landfall of the Deepwater Horizon oil release, were collected and evaluated for toxicity with the sea urchin fertilization and embryological development assays. There were 17 pre-landfall samples and 49 post-landfall samples tested using both assays. Toxicity was determined in four pre...
Authors
James M. Biedenbach, Robert S. Carr

Determination of the anionic surfactant di(ethylhexyl) sodium sulfosuccinate in water samples collected from Gulf of Mexico coastal waters before and after landfall of oil from the Deepwater Horizon oil spill, May to October, 2010 Determination of the anionic surfactant di(ethylhexyl) sodium sulfosuccinate in water samples collected from Gulf of Mexico coastal waters before and after landfall of oil from the Deepwater Horizon oil spill, May to October, 2010

On April 22, 2010, the explosion on and subsequent sinking of the Deepwater Horizon oil drilling platform resulted in the release of crude oil into the Gulf of Mexico. At least 4.4 million barrels had been released into the Gulf of Mexico through July 15, 2010, 10 to 29 percent of which was chemically dispersed, primarily using two dispersant formulations. Initially, the dispersant...
Authors
James L. Gray, Leslie K. Kanagy, Edward T. Furlong, Jeff W. McCoy, Chris J. Kanagy
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