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Publications

These publications showcase the significant science conducted in our Science Centers.

Filter Total Items: 16727

A synthesis of thresholds for focal species along the U.S. Atlantic and Gulf Coasts: A review of research and applications A synthesis of thresholds for focal species along the U.S. Atlantic and Gulf Coasts: A review of research and applications

The impacts from climate change are increasing the possibility of vulnerable coastal species and habitats crossing critical thresholds that could spur rapid and possibly irreversible changes. For species of high conservation concern, improved knowledge of quantitative thresholds could greatly improve management. To meet this need, we synthesized information pertaining to biological...
Authors
Emily J. Powell, Megan C. Tyrrell, Andrew Milliken, John M. Tirpak, Michelle D. Staudinger

Value of information analysis as a decision support tool for biosecurity Value of information analysis as a decision support tool for biosecurity

This chapter demonstrates the economic concept of ‘value of information’(VOI), and how biosecurity managers can use VOI analysis to decide whether or not to reduce uncertainty by collecting additional information through monitoring, experimentation, or some other form of research. We first explore how some uncertainties may be scientifically interesting to resolve, but ultimately...
Authors
Michael C. Runge, Tracy Rout, Daniel Spring, Terry Walshe

Efficient processing of two-dimensional arrays with C or C++ Efficient processing of two-dimensional arrays with C or C++

Because fast and efficient serial processing of raster-graphic images and other two-dimensional arrays is a requirement in land-change modeling and other applications, the effects of 10 factors on the runtimes for processing two-dimensional arrays with C and C++ are evaluated in a comparative factorial study. This study’s factors include the choice among three C or C++ source-code...
Authors
David I. Donato

Optimization of decision rules for hydroelectric operation to reduce both eel mortality and unnecessary turbine shutdown: A search for a win-win solution Optimization of decision rules for hydroelectric operation to reduce both eel mortality and unnecessary turbine shutdown: A search for a win-win solution

Worldwide populations of freshwater eels have declined with one of the contributing causes related to mortality during passage through hydropower turbines. An inherent trade‐off underlies turbine management where the competing demand for more hydropower comes at the expense of eel survival. A win–win solution exists when an option performs better on all competing demands compared to...
Authors
David R. Smith, Paul L. Fackler, Sheila M. Eyler, Laura Villegas, Stuart A. Welsh

Evolutionary dynamics of an expressed MHC class IIβ locus in the Ranidae (Anura) uncovered by genome walking and high-throughput amplicon sequencing Evolutionary dynamics of an expressed MHC class IIβ locus in the Ranidae (Anura) uncovered by genome walking and high-throughput amplicon sequencing

The Major Histocompatibility Complex (MHC) is a genomic region encoding immune loci that are important and frequently used markers in studies of adaptive genetic variation and disease resistance. Given the primary role of infectious diseases in contributing to global amphibian declines, we characterized the hypervariable exon 2 and flanking introns of the MHC Class IIβ chain for 17...
Authors
Kevin P. Mulder, Maria Cortazar-Chinarro, D. James Harris, Angelica Crottini, Evan H. Campbell Grant, Robert C. Fleischer, Anna E. Savage

National assessment of shoreline change—Summary statistics for updated vector shorelines and associated shoreline change data for the Gulf of Mexico and Southeast Atlantic coasts National assessment of shoreline change—Summary statistics for updated vector shorelines and associated shoreline change data for the Gulf of Mexico and Southeast Atlantic coasts

Long-term rates of shoreline change for the Gulf of Mexico and Southeast Atlantic regions of the United States have been updated as part of the U.S. Geological Survey’s National Assessment of Shoreline Change project. Additional shoreline position data were used to compute rates where the previous rate-of-change assessment only included four shoreline positions at a given location. The...
Authors
Emily A. Himmelstoss, Meredith G. Kratzmann, E. Robert Thieler

Group inverse sampling: An economical approach to inverse sampling Group inverse sampling: An economical approach to inverse sampling

Inverse sampling is an adaptive design in the sense that the final sampling effort during a search for rare events will depend on what is found during the survey. Conventional inverse sampling (CIS) designs successively select individual sampling units to find, for example, the k th rare event. In real sampling situations, use of successive one‐by‐one sampling can be cost prohibitive...
Authors
Bardia Panahbehagh, David R. Smith

Atypical feeding behavior of Long-tailed Ducks in the wake of a commercial fishing boat while clamming Atypical feeding behavior of Long-tailed Ducks in the wake of a commercial fishing boat while clamming

A foraging group of Clangula hyemalis (Long-tailed Duck) was observed on 10 February 2010 diving behind a commercial boat that was clamming near Monomoy Island, Nantucket Sound, MA. We used a shotgun to collect 9 of the ducks, and our analyses of gizzard and gullet (esophagus and proventriculus) revealed 37 food items in the gizzard and 16 in the gullet. Mollusca were the dominant food...
Authors
Matthew Perry, Peter C. Osenton, Timothy P. White

Coding conventions and principles for a National Land-Change Modeling Framework Coding conventions and principles for a National Land-Change Modeling Framework

This report establishes specific rules for writing computer source code for use with the National Land-Change Modeling Framework (NLCMF). These specific rules consist of conventions and principles for writing code primarily in the C and C++ programming languages. Collectively, these coding conventions and coding principles create an NLCMF programming style. In addition to detailed naming
Authors
David I. Donato

Sand ridge morphology and bedform migration patterns derived from bathymetry and backscatter on the inner-continental shelf offshore of Assateague Island, USA Sand ridge morphology and bedform migration patterns derived from bathymetry and backscatter on the inner-continental shelf offshore of Assateague Island, USA

The U.S. Geological Survey and the National Oceanographic and Atmospheric Administration conducted geophysical and hydrographic surveys, respectively, along the inner-continental shelf of Fenwick and Assateague Islands, Maryland and Virginia over the last 40 years. High resolution bathymetry and backscatter data derived from surveys over the last decade are used to describe the...
Authors
Elizabeth A. Pendleton, Laura L. Brothers, E. Robert Thieler, Edward Sweeney

Allowable take of a population of red-winged blackbirds in the northern Great Plains Allowable take of a population of red-winged blackbirds in the northern Great Plains

Red-winged blackbirds (Agelaius phoeniceus) are protected under the Migratory Bird Treaty Act (MBTA), which has provisions against take. Blackbirds may be taken legally without a Federal permit, however, under an existing Depredation Order (50 CFR 21.43), which allows for take of blackbirds that are in the process of doing, or about to do, agricultural damage. Modeling the effect of take...
Authors
Michael C. Runge, John R. Sauer

Water quality and quantity and simulated surface-water and groundwater flow in the Laurel Hill Creek Basin, southwestern Pennsylvania, 1991–2007 Water quality and quantity and simulated surface-water and groundwater flow in the Laurel Hill Creek Basin, southwestern Pennsylvania, 1991–2007

Laurel Hill Creek is considered one of the most pristine waterways in southwestern Pennsylvania and has high recreational value as a high-quality cold-water fishery; however, the upper parts of the basin have documented water-quality impairments. Groundwater and surface water are withdrawn for public water supply and the basin has been identified as a Critical Water Planning Area (CWPA)...
Authors
Daniel G. Galeone, Dennis W. Risser, Lee W. Eicholtz, Scott A. Hoffman
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