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Publications

Publications from USGS science centers throughout the Southeast Region.

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Belowground productivity varies by assessment technique, vegetation type, and nutrient availability in tidal freshwater forested wetlands transitioning to marsh Belowground productivity varies by assessment technique, vegetation type, and nutrient availability in tidal freshwater forested wetlands transitioning to marsh

Wetlands along upper estuaries are characterized by dynamic transitions between forested and herbaceous communities (marsh) as salinity, hydroperiod, and nutrients change. The importance of belowground net primary productivity (BNPP) associated with fine and coarse root growth also changes but remains the dominant component of overall productivity in these important blue carbon wetlands
Authors
Andrew From, Ken Krauss, Gregory B. Noe, N. Cormier, Camille Stagg, Rebecca Moss, Julie L. Whitbeck

Regeneration trends along climate gradients in Taxodium distichum forests of the southeastern United States Regeneration trends along climate gradients in Taxodium distichum forests of the southeastern United States

The development of relict vegetation at the edges of some ecosystems has taken place particularly in environments where the regeneration of foundational species is declining. As an important stage of regeneration in the Taxodium distichum, this study explored the relationship of cone volume and seed number across environmental gradients in the Mississippi River Alluvial Valley (MRAV) and...
Authors
Beth Middleton, Ting Lei, Omag Villegas, Xiaohui Liu

Introduced mangroves along the coast of Moloka‘i, Hawai‘i may represent novel habitats for megafaunal communities Introduced mangroves along the coast of Moloka‘i, Hawai‘i may represent novel habitats for megafaunal communities

Mangrove forests are prevalent along tropical/subtropical coastlines and provide valuable ecosystem services including coastline stabilization, storm impact reduction, and enhanced coastal productivity. However, mangroves were absent from the Hawaiian Islands and their introduction to Moloka‘i in 1902 has provided an opportunity to examine their unique influence on coastal landscapes...
Authors
Bryan A. Nakahara, Amanda W. Demopoulos, Yoshimi M. Rii, Rosanna A. Alegado, Kauaoa Fraiola, Craig R. Smith

Event scale relationships of DOC and TDN fluxes in throughfall and stemflow diverge from stream exports in a forested catchment Event scale relationships of DOC and TDN fluxes in throughfall and stemflow diverge from stream exports in a forested catchment

Aquatic fluxes of carbon and nutrients link terrestrial and aquatic ecosystems. Within forests, storm events drive both the delivery of carbon and nitrogen to the forest floor and the export of these solutes from the land via streams. To increase understanding of the relationships between hydrologic event character and the relative fluxes of carbon and nitrogen in throughfall, stemflow...
Authors
Kevin A. Ryan, Thomas Adler, Ann T. Chalmers, Julia Perdrial, James B. Shanley, Aron Stubbins

Comparison of preservation and extraction methods on five taxonomically disparate coral microbiomes Comparison of preservation and extraction methods on five taxonomically disparate coral microbiomes

All animals are host to a multitude of microorganisms that are essential to the animal’s health. Host-associated microbes have been shown to defend against potential pathogens, provide essential nutrients, interact with the host’s immune system, and even regulate mood. However, it can be difficult to preserve and obtain nucleic acids from some host-associated microbiomes, making studying...
Authors
Zoe A. Pratte, Christina A. Kellogg

An efficient method to calculate depth-integrated, phase-averaged momentum balances in non-hydrostatic models An efficient method to calculate depth-integrated, phase-averaged momentum balances in non-hydrostatic models

Analysis of the mean (wave-averaged) momentum balance is a common approach used to explain the physical forcing driving wave set-up and mean currents in the nearshore zone. Traditionally this approach has been applied to phase-averaged models but has more recently been applied to phase-resolving models using post-processing, whereby model output is used to calculate each of the momentum...
Authors
Renan F. da Silva, Dirk P. Rijnsdorp, Jeff E. Hansen, Ryan J. Lowe, Mark L. Buckley, Marcel Zijlema

Gap-filling eddy covariance methane fluxes: Comparison of machine learning model predictions and uncertainties at FLUXNET-CH4 wetlands Gap-filling eddy covariance methane fluxes: Comparison of machine learning model predictions and uncertainties at FLUXNET-CH4 wetlands

Time series of wetland methane fluxes measured by eddy covariance require gap-filling to estimate daily, seasonal, and annual emissions. Gap-filling methane fluxes is challenging because of high variability and complex responses to multiple drivers. To date, there is no widely established gap-filling standard for wetland methane fluxes, with regards both to the best model algorithms and...
Authors
Jeremy Irvin, Sharon Zhou, Gavin McNicol, Fred Lu, Vincent Liu, Etienne Fluet-Chouinard, Zutao Ouyang, Sara Helen Knox, Antje Lucas-Moffat, Carlo Trotta, Dario Papale, Domenico Vitale, Ivan Mammarella, Pavel Alekseychik, Mika Aurela, Anand Avati, Dennis Baldocchi, Sheel Bansal, Gil Bohrer, David I. Campbell, Jiquan Chen, Housen Chu, Higo J. Dalmagro, Kyle B. Delwiche, Ankur R. Desai, Eugenie S. Euskirchen, Sarah Feron, Mathias Goeckede, Martin Heimann, Manuel Helbig, Carole Helfter, Kyle S. Hemes, Takashi Hirano, Hiroki Iwata, Gerald Jurasinski, Aram Kalhori, Andrew Kondrich, Derrick Y. F. Lai, Annalea Lohila, Avni Malholtra, Lutz Merbold, Bhaskar Mitra, Andrew Ng, Mats B. Nilsson, Asko Noormets, Matthias Peichl, A. Camilo Rey-Sanchez, Andrew D. Richardson, Benjamin R. K. Runkle, Karina V. R. Schafer, Oliver Sonnentag, Ellen Stuart-Haëntjens, Cove Sturtevant, Masahito Ueyama, Alex C. Valach, Rodrigo Vargas, George L. Vourlitis, Eric Ward, Guan Xhuan Wong, Donatella Zona, Ma. Carmelita R. Alberto, David P. Billesbach, Gerardo Celis, Han Dolman, Thomas Friborg, Kathrin Fuchs, Sebastien Gogo, Mangaliso J. Gondwe, Jordan P. Goodrich, Pia Gottschalk, Lukas Hortnagl, Adrien Jacotot, Franziska Koebsch, Kuno Kasak, Regine Maier, Timothy H. Morin, Eiko Nemitz, Walter C. Oechel, Patricia Y. Oikawa, Keisuke Ono, Torsten Sachs, Ayaka Sakabe, Edward A. Schuur, Robert Shortt, Ryan C. Sullivan, Daphne J. Szutu, Eeva-Stiina Tuittila, Andrej Varlagin, Joseph G. Verfaillie, Christian Wille, Lisamarie Windham-Myers, Benjamin Poulter, Robert B. Jackson

Genetic structure and diversity of the mustard hill coral Porites astreoides along the Florida Keys reef tract Genetic structure and diversity of the mustard hill coral Porites astreoides along the Florida Keys reef tract

Increases in local and global stressors have led to major declines in coral populations throughout the western Atlantic. While abundances of other species have declined, however, the relative abundance of the mustard hill coral, Porites astreoides, has increased. Porites astreoides is relatively resilient to some stressors, and because of its mixed reproductive strategies, its...
Authors
Dominique N. Gallery, Michelle L. Green, Ilsa B. Kuffner, Elizabeth A. Lenz, Lauren T. Toth

Occurrence and distribution of mercury in streams and reservoirs in the Triangle Area of North Carolina, July 2007–June 2009 Occurrence and distribution of mercury in streams and reservoirs in the Triangle Area of North Carolina, July 2007–June 2009

During the time period 2001–2006, the U.S. Geological Survey reported mercury-concentration measurements that exceeded the North Carolina water-quality criterion (NCWQC) of 0.012 microgram per liter for total recoverable mercury in streams and reservoirs across the Triangle Area of North Carolina. Mercury data were sparse, however, generally consisting of only one or two water samples...
Authors
Anna M. McKee, Sharon Fitzgerald, Mary J. Giorgino

Hydraulic modeling at selected dam-removal and culvert-retrofit sites in the northeastern United States Hydraulic modeling at selected dam-removal and culvert-retrofit sites in the northeastern United States

Aquatic connectivity projects, such as removing dams and modifying culverts, have substantial benefits. The restoration of natural flow conditions improves water quality, sediment transport, aquatic and riparian habitat, and fish passage. These projects can also decrease hazards faced by communities by lowering water-surface elevations of flood waters and by removing the risk of dam...
Authors
Scott A. Olson, Caelan E. Simeone

Potential effect of low-rise, downcast artificial lights on nocturnally migrating land birds Potential effect of low-rise, downcast artificial lights on nocturnally migrating land birds

Artificial light at night (ALAN) on tall or upward-pointed lighting installations affects the flight behavior of night-migrating birds. We hypothesized that common low-rise lights pointing downward also affect the movement of nocturnal migrants. We predicted that birds in flight will react close to low-rise lights, and be attracted and grounded near light sources, with a stronger effect...
Authors
Sergio A. Cabrera-Cruz, Ronald P. Larkin, Maren E. Gimpel, James G. Gruber, Theodore J. Zenzal, Jeffrey J. Buler

Genetic diversity is considered important but interpreted narrowly in country reports to the Convention on Biological Diversity: Current actions and indicators are insufficient Genetic diversity is considered important but interpreted narrowly in country reports to the Convention on Biological Diversity: Current actions and indicators are insufficient

International agreements such as the Convention on Biological Diversity (CBD) have committed to conserve, and sustainably and equitably use, biodiversity. The CBD is a vital instrument for global conservation because it guides 195 countries and the European Union in setting priorities and allocating resources, and requires regular reporting on progress. However, the CBD and similar...
Authors
Sean M. Hoban, Catriona D. Campbell, Jessica M. da Silva, Robert Ekblom, W. Chris Funk, Brittany A. Garner, Jose A. Godoy, Francine Kershaw, Anna J. MacDonald, Joachim Mergeay, Melissa Minter, David O'Brien, Ivan Paz Vinas, Sarah K. Pearson, Silvia Perez-Espona, Kevin M. Potter, Isa-Rita M. Russo, Gernot Segelbacher, Cristiano Vernesi, Margaret Hunter
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