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Publications

Publications from USGS science centers throughout the Southeast Region.

Filter Total Items: 10361

A comprehensive list and photographic collection of the vascular flora of Caddo Lake National Wildlife Refuge, Texas, March 2011-March 2012 A comprehensive list and photographic collection of the vascular flora of Caddo Lake National Wildlife Refuge, Texas, March 2011-March 2012

A floristics inventory was conducted to identify and photograph the vascular plants occurring at Caddo Lake National Wildlife Refuge (NWR), Texas, from March 2011 to March 2012 by the U.S. Geological Survey in cooperation with the U.S. Fish and Wildlife Service. This research resulted in the identification of 511 taxa of vascular plants representing 111 families and 317 genera. Despite...
Authors
Larry Allain

Adaptations of indigenous bacteria to fuel contamination in karst aquifers in south-central Kentucky Adaptations of indigenous bacteria to fuel contamination in karst aquifers in south-central Kentucky

The karst aquifer systems in southern Kentucky can be dynamic and quick to change. Microorganisms that live in these unpredictable aquifers are constantly faced with environmental changes. Their survival depends upon adaptations to changes in water chemistry, taking advantage of positive stimuli and avoiding negative environmental conditions. The U.S. Geological Survey conducted a study...
Authors
Thomas D. Byl, David W. Metge, Daniel T. Agymang, Mike Bradley, Gregg Hileman, Ronald W. Harvey

Guidelines for use of fishes in research Guidelines for use of fishes in research

The 2004 and 2014 Guidelines were developed to provide a structure that advances appropriate attention toward valid experimental designs and procedures with aquatic animals while ensuring humane treatment of the experimental subjects. At a practical level, the Guidelines are intended to provide general recommendations on field and laboratory endeavors, such as sampling, holding, and...
Authors
J. A. Jenkins, H.L. Bart, James D. Bowker, P.R. Bowser, J.R. MacMillan, J.G. Nickum, J. D. Rose, P. W. Sorenson, G.W. Whitledge, J.W. Rachlin, B.E. Warkentine, H. L. Bart

Reach-scale comparison of habitat and mollusk assemblages for select sites in the Clinch River with regional context Reach-scale comparison of habitat and mollusk assemblages for select sites in the Clinch River with regional context

Several hypotheses, including habitat degradation and variation in fluvial geomorphology, have been posed to explain extreme spatial and temporal variation in Clinch River mollusk assemblages. We examined associations between mollusk assemblage metrics (richness, abundance, recruitment) and physical habitat (geomorphology, streambed composition, fish habitat, and riparian condition) at...
Authors
Brett J. K. Ostby, Jennifer L. Krstolic, Gregory C. Johnson

Site fidelity and condition metrics suggest sequential habitat use by early juvenile snook Site fidelity and condition metrics suggest sequential habitat use by early juvenile snook

The common snook Centropomus undecimalis is an estuarine-dependent fish that relies on landward wetlands as nursery habitat. Despite its economic importance, portions of the snook's early life history are poorly understood. We compared habitat use of young-of-the-year (YOY) snook in 2 geomorphic mesohabitats (tidal pond and tidal creek) along an estuarine gradient (upstream vs...
Authors
Adam B. Brame, Carole McIvor, Ernst B Peebles, David J. Hollander

Causal networks clarify productivity-richness interrelations, bivariate plots do not Causal networks clarify productivity-richness interrelations, bivariate plots do not

Perhaps no other pair of variables in ecology has generated as much discussion as species richness and ecosystem productivity, as illustrated by the reactions by Pierce (2013) and others to Adler et al.'s (2011) report that empirical patterns are weak and inconsistent. Adler et al. (2011) argued we need to move beyond a focus on simplistic bivariate relationships and test mechanistic
Authors
James B. Grace, Peter B. Adler, W. Stanley Harpole, Elizabeth T. Borer, Eric W. Seabloom

Non-native fishes in Florida freshwaters: a literature review and synthesis Non-native fishes in Florida freshwaters: a literature review and synthesis

Non-native fishes have been known from freshwater ecosystems of Florida since the 1950s, and dozens of species have established self-sustaining populations. Nonetheless, no synthesis of data collected on those species in Florida has been published until now. We searched the literature for peer-reviewed publications reporting original data for 42 species of non-native fishes in Florida...
Authors
Pamela J. Schofield, William F. Loftus

Integrated assessment of runoff from livestock farming operations: analytical chemistry, in vitro bioassays, and in vivo fish exposures Integrated assessment of runoff from livestock farming operations: analytical chemistry, in vitro bioassays, and in vivo fish exposures

Animal waste from livestock farming operations can contain varying levels of natural and synthetic androgens and/or estrogens, which can contaminate surrounding waterways. In the present study, surface stream water was collected from 6 basins containing livestock farming operations. Aqueous concentrations of 12 hormones were determined via chemical analyses. Relative androgenic and...
Authors
Jenna E. Cavallin, Elizabeth J. Durhan, Nicola Evans, Kathleen M. Jensen, Michael D. Kahl, Dana W. Kolpin, Edward Kolodziej, William T. Foreman, Carlie A. LaLone, Elizabeth A. Makynen, Sara M. Seidl, Linnea M. Thomas, Daniel L. Villeneuve, Matthew A. Weberg, Vickie S. Wilson, Gerald T. Ankley

Migration, foraging, and residency patterns for Northern Gulf loggerheads: implications of local threats and international movements Migration, foraging, and residency patterns for Northern Gulf loggerheads: implications of local threats and international movements

Northern Gulf of Mexico (NGoM) loggerheads (Caretta caretta) make up one of the smallest subpopulations of this threatened species and have declining nest numbers. We used satellite telemetry and a switching state-space model to identify distinct foraging areas used by 59 NGoM loggerheads tagged during 2010–2013. We tagged turtles after nesting at three sites, 1 in Alabama (Gulf Shores...
Authors
Kristen M. Hart, Margaret M. Lamont, Autumn R. Sartain-Iverson, Ikuko Fujisaki

Effects of hydrologic modifications on salinity and formation of hypoxia in the Mississippi River-Gulf Outlet and adjacent waterways, southeastern Louisiana, 2008 to 2012 Effects of hydrologic modifications on salinity and formation of hypoxia in the Mississippi River-Gulf Outlet and adjacent waterways, southeastern Louisiana, 2008 to 2012

The Mississippi River-Gulf Outlet (MRGO) was constructed between 1958 and 1968 to provide a safer and shorter route between the Gulf of Mexico and the Port of New Orleans for ocean-going vessels. In 2006, the U.S. Congress directed the U.S. Army Corps of Engineers (USACE) to develop and implement a plan to deauthorize a portion of the MRGO ship channel from its confluence with the Gulf
Authors
Christopher M. Swarzenski, Scott V. Mize

Whiting events in SW Florida coastal waters: a case study using MODIS medium-resolution data Whiting events in SW Florida coastal waters: a case study using MODIS medium-resolution data

Whitings, floating patches of calcium carbonate mud, have been found in both shallow carbonate banks and freshwater environments around the world. Although these events have been studied for many decades, much of their characteristics remain unknown. Recent sightings of whitings near Ten Thousand Islands, Florida suggest a phenomenon that has not previously been documented in this area...
Authors
Jacqueline Long, Chuanmin Hu, Lisa Robbins

The rock coast of the USA The rock coast of the USA

The coastline of the USA is vast and comprises a variety of landform types including barrier islands, mainland beaches, soft bluffed coastlines and hard rocky coasts. The majority of the bluffed and rocky coasts are found in the northeastern part of the country (New England) and along the Pacific coast. Rocky and bluffed landform types are commonly interspersed along the coastline and...
Authors
Cheryl J. Hapke, Peter N. Adams, Jonathan Allan, Andrew Ashton, Gary B. Griggs, Monty A. Hampton, Joseph Kelly, Adam P. Young
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