Craig A Jackson
Craig Jackson
Science and Products
A round-robin evaluation of the repeatability and reproducibility of environmental DNA assays for dreissenid mussels
Resource managers may be hesitant to make decisions based on environmental (e)DNA results alone since eDNA is an indirect method of species detection. One way to reduce the uncertainty of eDNA is to identify laboratory‐based protocols that ensure repeatable and reproducible results. We conducted a double‐blind round‐robin analysis of probe‐based assays for DNA of dreissenid (Dreissena spp.) mussel
Authors
Adam J. Sepulveda, Patrick R. Hutchins, Craig Jackson, Carl Ostberg, Matthew Laramie, Jon Amberg, Timothy D. Counihan, Andrew B. Hoegh, David Pilliod
Reporting the limits of detection and quantification for environmental DNA assays
BackgroundEnvironmental DNA (eDNA) analysis is increasingly being used to detect the presence and relative abundance of rare species, especially invasive or imperiled aquatic species. The rapid progress in the eDNA field has resulted in numerous studies impacting conservation and management actions. However, standardization of eDNA methods and reporting across the field is yet to be fully establis
Authors
Katy E. Klymus, Christopher M. Merkes, Michael J. Allison, Caren S. Goldberg, Caren C. Helbing, Margaret Hunter, Craig Jackson, Richard F. Lance, Anna M. Mangan, Emy M. Monroe, Antoinette J. Piaggio, Joel P. Stokdyk, Chris C. Wilson, Catherine A. Richter
The complete mitochondrial genome of Hine’s emerald dragonfly (Somatochlora hineana Williamson) via NGS sequencing
Here, we report the complete mitochondrial genome of the endangered Hine’s emerald dragonfly (HED), Somatochlora hineana Williamson. Data were generated via next generation sequencing (NGS) and assembled using a mitochondrial baiting and iterative mapping approach. The full length circular genome is 15,705 bp with 26.6% GC content. It contains the typical metazoan set of 37 genes: 13 protein-codin
Authors
Craig Jackson, S. Grace McCalla, Jon Amberg, Daniel Soluk, Hugh Britten
Profiles of digestive enzymes of two competing planktivores, silver carp and gizzard shad, differ
Typically, studies in digestive physiology in fish focus on a few enzymes and provide insight into the specific processes of the enzyme in a targeted species. Comparative studies assessing a wide number of digestive enzymes on fishes that compete for food resources are lacking, especially in the context of an introduced species. It is generally thought that the invasive silver carp (SVC; Hypophtha
Authors
Jon Amberg, Nathan R. Jensen, Richard A. Erickson, Blake W. Sauey, Craig Jackson
Lethal and sublethal responses of native mussels (Unionidae: Lampsilis siliquoidea and Lampsilis higginsii) to elevated carbon dioxide
Levels of carbon dioxide (CO2) that have been proposed for aquatic invasive species control (24 000 – 96 000 μatm partial pressure of CO2 (PCO2); 1 atm = 101.325 kPa) were tested on two juvenile mussels, the fatmucket (Lampsilis siliquoidea) and the US federally endangered Higgins’ eye (Lampsilis higginsii). A suite of responses (survival, growth, behavior, and gene expression) were measured after
Authors
Diane L. Waller, Michelle R. Bartsch, Lynn A. Bartsch, Craig Jackson
Comparing efficiency of American Fisheries Society standard snorkeling techniques to environmental DNA sampling techniques
Analysis of environmental DNA (eDNA) is an emerging technique used to detect aquatic species through water sampling and the extraction of biological material for amplification. Our study compared the efficacy of eDNA methodology to American Fisheries Society (AFS) standard snorkeling surveys with regard to detecting the presence of rare fish species. Knowing which method is more efficient at detec
Authors
Roy M. Ulibarri, Scott A. Bonar, Christopher B. Rees, Jon J. Amberg, Bridget Ladell, Craig Jackson
Seasonal trends in eDNA detection and occupancy of bigheaded carps
Bigheaded carps, which include silver and bighead carp, are threatening to invade the Great Lakes. These species vary seasonally in distribution and abundance due to environmental conditions such as precipitation and temperature. Monitoring this seasonal movement is important for management to control the population size and spread of the species. We examined if environmental DNA (eDNA) approaches
Authors
Richard A. Erickson, Christopher M. Merkes, Craig Jackson, Reuben Goforth, Jon Amberg
Science and Products
A round-robin evaluation of the repeatability and reproducibility of environmental DNA assays for dreissenid mussels
Resource managers may be hesitant to make decisions based on environmental (e)DNA results alone since eDNA is an indirect method of species detection. One way to reduce the uncertainty of eDNA is to identify laboratory‐based protocols that ensure repeatable and reproducible results. We conducted a double‐blind round‐robin analysis of probe‐based assays for DNA of dreissenid (Dreissena spp.) mussel
Authors
Adam J. Sepulveda, Patrick R. Hutchins, Craig Jackson, Carl Ostberg, Matthew Laramie, Jon Amberg, Timothy D. Counihan, Andrew B. Hoegh, David Pilliod
Reporting the limits of detection and quantification for environmental DNA assays
BackgroundEnvironmental DNA (eDNA) analysis is increasingly being used to detect the presence and relative abundance of rare species, especially invasive or imperiled aquatic species. The rapid progress in the eDNA field has resulted in numerous studies impacting conservation and management actions. However, standardization of eDNA methods and reporting across the field is yet to be fully establis
Authors
Katy E. Klymus, Christopher M. Merkes, Michael J. Allison, Caren S. Goldberg, Caren C. Helbing, Margaret Hunter, Craig Jackson, Richard F. Lance, Anna M. Mangan, Emy M. Monroe, Antoinette J. Piaggio, Joel P. Stokdyk, Chris C. Wilson, Catherine A. Richter
The complete mitochondrial genome of Hine’s emerald dragonfly (Somatochlora hineana Williamson) via NGS sequencing
Here, we report the complete mitochondrial genome of the endangered Hine’s emerald dragonfly (HED), Somatochlora hineana Williamson. Data were generated via next generation sequencing (NGS) and assembled using a mitochondrial baiting and iterative mapping approach. The full length circular genome is 15,705 bp with 26.6% GC content. It contains the typical metazoan set of 37 genes: 13 protein-codin
Authors
Craig Jackson, S. Grace McCalla, Jon Amberg, Daniel Soluk, Hugh Britten
Profiles of digestive enzymes of two competing planktivores, silver carp and gizzard shad, differ
Typically, studies in digestive physiology in fish focus on a few enzymes and provide insight into the specific processes of the enzyme in a targeted species. Comparative studies assessing a wide number of digestive enzymes on fishes that compete for food resources are lacking, especially in the context of an introduced species. It is generally thought that the invasive silver carp (SVC; Hypophtha
Authors
Jon Amberg, Nathan R. Jensen, Richard A. Erickson, Blake W. Sauey, Craig Jackson
Lethal and sublethal responses of native mussels (Unionidae: Lampsilis siliquoidea and Lampsilis higginsii) to elevated carbon dioxide
Levels of carbon dioxide (CO2) that have been proposed for aquatic invasive species control (24 000 – 96 000 μatm partial pressure of CO2 (PCO2); 1 atm = 101.325 kPa) were tested on two juvenile mussels, the fatmucket (Lampsilis siliquoidea) and the US federally endangered Higgins’ eye (Lampsilis higginsii). A suite of responses (survival, growth, behavior, and gene expression) were measured after
Authors
Diane L. Waller, Michelle R. Bartsch, Lynn A. Bartsch, Craig Jackson
Comparing efficiency of American Fisheries Society standard snorkeling techniques to environmental DNA sampling techniques
Analysis of environmental DNA (eDNA) is an emerging technique used to detect aquatic species through water sampling and the extraction of biological material for amplification. Our study compared the efficacy of eDNA methodology to American Fisheries Society (AFS) standard snorkeling surveys with regard to detecting the presence of rare fish species. Knowing which method is more efficient at detec
Authors
Roy M. Ulibarri, Scott A. Bonar, Christopher B. Rees, Jon J. Amberg, Bridget Ladell, Craig Jackson
Seasonal trends in eDNA detection and occupancy of bigheaded carps
Bigheaded carps, which include silver and bighead carp, are threatening to invade the Great Lakes. These species vary seasonally in distribution and abundance due to environmental conditions such as precipitation and temperature. Monitoring this seasonal movement is important for management to control the population size and spread of the species. We examined if environmental DNA (eDNA) approaches
Authors
Richard A. Erickson, Christopher M. Merkes, Craig Jackson, Reuben Goforth, Jon Amberg