Publications
This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.
Filter Total Items: 43130
Using structured decision-making to develop a communications strategy for the U.S. Geological Survey Cooperative Research Units Program Using structured decision-making to develop a communications strategy for the U.S. Geological Survey Cooperative Research Units Program
Communication regarding the mission of the U.S. Geological Survey (USGS) Cooperative Research Units Program (CRU) can take many forms, yet clear and concise messaging for various audiences is critical to highlight program accomplishments and increase visibility. Before the work described in this report, CRU did not have a communication strategy; therefore, CRU leadership supported a...
Authors
Kelly Filer Robinson, Sarah Nelson Sells, Conor P. McGowan, Elise R. Irwin
Tissue metal concentrations and toxicity in wild turkeys following chronic exposure to mining-contaminated soils in southeast Missouri, USA Tissue metal concentrations and toxicity in wild turkeys following chronic exposure to mining-contaminated soils in southeast Missouri, USA
The Big River watershed in southeast Missouri (SEMO) is a Superfund site with an extensive history of lead (Pb) and zinc (Zn) mining; cadmium (Cd) and other metals also occur in the ore and waste materials. We examined whether SEMO wild turkeys (Meleagris gallopavo) exposed to mining-contaminated floodplain soils and food resources in the Big River watershed had elevated metal...
Authors
Katrina K. Knott, Danielle M. Cleveland, Jason L. Isabelle, Nicole M. Nemeth, Emma Coleman, Michelle Seers, Nicholas Sievert, Emily Sinnott, Jeff Wenzel, Paul Blanchard, Timothy Lyons
Rethinking seed selection based on climate matching during restoration: Geography, soils and climate explain species-specific mortality Rethinking seed selection based on climate matching during restoration: Geography, soils and climate explain species-specific mortality
Implicit in the construction of seed transfer zones (STZs) are the assumptions that plant populations are adapted to their home climates and that transferring native seed across climate gradients risks maladaptation and poor performance. However, plants are adapted to multiple aspects of their environments that are often excluded from STZ development. Here, we used models integrating...
Authors
Carla Maria Roybal, Ella M. Samuel, Rachel M. Mitchell, Daniel E. Winkler, Robert Massatti
GT-Seq panel development for species identification and parentage analysis of closely related hybridising Scaphirhynchus sturgeons GT-Seq panel development for species identification and parentage analysis of closely related hybridising Scaphirhynchus sturgeons
Hatchery supplementation is vital for conserving dwindling fish populations. Effective augmentation requires distinguishing hatchery-origin from wild individuals and accurately identifying species, particularly in systems where closely related species coexist. Genetic monitoring is key to quantifying genetic differences, but conventional markers do not distinguish hybrids, especially...
Authors
Junman Huang, Richard Flamio Jr., Nathan R. Campbell, Aaron J. DeLonay, Amy C. Buhman, Edward J. Heist
The interplay of habitat quality and temperature shape demographic patterns of mule deer (Odocoileus hemionus) in North America The interplay of habitat quality and temperature shape demographic patterns of mule deer (Odocoileus hemionus) in North America
Mule deer (Odocoileus hemionus) are declining in abundance across their broad distribution in western North America. Identifying drivers of mule deer demography could inform habitat restoration. However, linking habitat quality to vital rates is challenging and often done indirectly using proxy metrics. We combine habitat selection with climate-related effects to identify synergistic...
Authors
William Michael Janousek, Aaron N. Johnston, Sarah Bullock, Sarah Dewey, L. Embere Hall, Teagan A. Hayes, Katey Huggler, Matthew J. Kauffman, Tayler N LaSharr, Blake Lowrey, Rhiannon P. Jakopak, Kevin Monteith, Tabitha A. Graves
Case report: Observations on expulsions from 20 years of radiotransmitter implantation in adult Burmese pythons Case report: Observations on expulsions from 20 years of radiotransmitter implantation in adult Burmese pythons
Background
Authors
Brandon A. Gross, Jacquelyn C. Guzy, Michael Cherkiss, Shannon G. Thrasher, Mark Robert Sandfoss, Lisa Marie McBride, Gretchen E. Anderson, Sarah Rae Sherburne, Christina Romagosa, Amanda Marie Kissel, Amy A. Yackel Adams, Andrea F. Currylow, Matthew F. McCollister, Frank Ridgley, Frank J. Mazzotti, George F. Bancroft, Kristen Hart
Cumulative effects of multiple stressors on marine mammals: Elephant seals as a model system Cumulative effects of multiple stressors on marine mammals: Elephant seals as a model system
Noise exposure is a potential stressor for free-ranging marine mammals and is often studied in the absence of other environmental factors. Here, a multi-investigator, interdisciplinary effort was undertaken to examine the response of elephant seals to multiple stressors. An integrated physiological and ecological approach was taken, including immunology, stress physiology, toxicology...
Authors
Daniel P. Costa, Rachel R. Holser, Garrett T. Shipway, Arina B. Favilla, Birgitte I. McDonald, Daphne M. Shen, Amber R. Diluzio, Sarah H. Peterson, Joshua T. Ackerman, Daniel E. Crocker
Population structure and genetic stock identification in southeastern United States loggerhead sea turtles (Caretta caretta) using genome-wide SNPs Population structure and genetic stock identification in southeastern United States loggerhead sea turtles (Caretta caretta) using genome-wide SNPs
Characterizing the genetic structure and connectivity between populations of endangered species can be used to inform management actions. In vagile species with high gene flow or recently established populations, such characterizations can be difficult to undertake using traditional genetic markers, and genetic stock identification (GSI) may be confounded by allele-sharing between...
Authors
Ian Silver-Gorges, Lisa M. Komoroske, Jamie Adkins Stoll, John D. Swenson, David S. Addison, Derek A. Burkholder, Dean A. Bagley, Glenn D. Goodwin, Kristen Hart, Joseph B. Pfaller, Brian M. Shamblin, Mariana M.P.B. Fuentes
Development of a two-stage lifecycle model to inform the trap-and-haul program for Oncorhynchus kisutch (coho salmon) in the Lewis River, Washington Development of a two-stage lifecycle model to inform the trap-and-haul program for Oncorhynchus kisutch (coho salmon) in the Lewis River, Washington
Restoration of salmon populations in the upper Lewis River Basin, Washington, depends on a trap-and-haul program owing to the Lewis River Hydroelectric Project (hereinafter referred to as “Project”) operated by PacifiCorp and Cowlitz Public Utilities District (hereinafter referred to as “Utilities”), which has been a barrier to salmon passage since the 1930s. Thus, sustaining the...
Authors
John M. Plumb, Russell W. Perry
A site prioritization tool for invasive species management: Integrating diverse spatial data to improve decision making A site prioritization tool for invasive species management: Integrating diverse spatial data to improve decision making
Resource managers are tasked with protecting natural areas from invasive species with limited resources. Further, invasive management goals can vary greatly based on different management priorities specific to management agencies or taxa of interest. The site prioritization tool for invasive species management addresses these challenges by creating a platform to view and combine diverse...
Authors
Janet S. Prevéy, Cameron J. Reimer, Peder S. Engelstad, Pairsa N. Belamaric, Terri Hogan, Jillian M. LaRoe, Colter J. Mumford, Jennifer L. Sieracki, Catherine S. Jarnevich
Non-native invasive beetle alters structure of a riparian bird community in a biodiversity hotspot Non-native invasive beetle alters structure of a riparian bird community in a biodiversity hotspot
A serious emerging threat to southern California riparian ecosystems is the invasive shot hole borer (Euwallacea spp.; SHB), a non-native beetle that cultivates a pathogenic fungus that kills trees of 66 reproductive host species. We examined the response of the bird community at the Tijuana River, California, to a massive SHB infestation in 2015 using data from a Monitoring Avian...
Authors
Barbara E. Kus, Julie L. Yee, Shannon M. Mendia
Annotated bibliography of scientific research on new world screwworm (Cochliomyia hominivorax) myiasis in wildlife Annotated bibliography of scientific research on new world screwworm (Cochliomyia hominivorax) myiasis in wildlife
The New World screwworm (Cochliomyia hominivorax; NWS) is a parasitic blowfly that lays its eggs in open wounds of live, warm-blooded animals including livestock, wildlife, and potentially humans. The larvae consume living animal tissue, and if untreated, the infestation can lead to death. Although NWS was eradicated in the United States in 1966, it has been moving northward from its...
Authors
Sarah Timbie, Shelby Jo Weidenkopf, Daniel A. Grear