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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 42874

Biodiversity loss reduces global terrestrial carbon storage Biodiversity loss reduces global terrestrial carbon storage

Natural ecosystems store large amounts of carbon globally, as organisms absorb carbon from the atmosphere to build large, long-lasting, or slow-decaying structures such as tree bark or root systems. An ecosystem’s carbon sequestration potential is tightly linked to its biological diversity. Yet when considering future projections, many carbon sequestration models fail to account for the...
Authors
Sarah R. Weiskopf, Forest Isbell, Maria Isabel Arce-Plata, Moreno Di Marco, Mike Harfoot, Justin A. Johnson, Susannah B. Lerman, Brian W. Miller, Toni Lyn Morelli, Akira S. Mori, Ensheng Weng, Simon Ferrier

Illegal shooting of protected nongame birds along power lines coincides with places and times of peak legal recreational shooting Illegal shooting of protected nongame birds along power lines coincides with places and times of peak legal recreational shooting

Illegal killing of protected nongame birds is pervasive and can be demographically relevant. In 2021 and 2022, we evaluated spatial and temporal patterns in illegal killing of birds along 69.7 km of power lines in the Morley Nelson Snake River Birds of Prey National Conservation Area in Idaho, USA, to provide insight into potential drivers behind the activity and key information to...
Authors
Eve C. Thomason, James R. Belthoff, Sharon A. Poessel, Todd E. Katzner

Discovery and genomic characterization of a novel hepadnavirus from asymptomatic anadromous alewife (Alosa pseudoharengus) Discovery and genomic characterization of a novel hepadnavirus from asymptomatic anadromous alewife (Alosa pseudoharengus)

The alewife (Alosa pseudoharengus) is an anadromous herring that inhabits waters of northeastern North America. This prey species is a critical forage for piscivorous birds, mammals, and fishes in estuarine and oceanic ecosystems. During a discovery project tailored to identify potentially emerging pathogens of this species, we obtained the full genome of a novel hepadnavirus (ApHBV)...
Authors
Clayton D. Raines, Jan Lovy, Nicolas B.D. Phelps, Sunil Mor, Terry Ng, Luke R. Iwanowicz

Ecological dissimilarity matters more than geographical distance when predicting land surface indicators using machine learning Ecological dissimilarity matters more than geographical distance when predicting land surface indicators using machine learning

Supervised training techniques, such as those used in machine learning, use generally large sets of in situ data to train models that can, in turn, be used to make predictions (or prediction maps) about the Earth’s surface in times or places where no in situ data exist. The purpose of the present study is to investigate, using a very large set of in situ data from across the western...
Authors
Bo Zhou, Gregory S. Okin, Junzhe Zhang, Shannon L. Savage, Christopher J. Cole, Michael C. Duniway

Human-induced range expansions result in a recent hybrid zone between sister species of ducks Human-induced range expansions result in a recent hybrid zone between sister species of ducks

Landscapes are consistently under pressure from human-induced ecological change, often resulting in shifting species distributions. For some species, changing the geographical breadth of their niche space results in matching range shifts to regions other than those in which they are formally found. In this study, we employ a population genomics approach to assess potential conservation...
Authors
Philip Lavretsky, Kevin J. Kraai, David Butler, James Morel, Jay Alan VonBank, Joseph Marty, Vergie Musni, Daniel P. Collins

Quantifying intraspecific variation in host resistance ad tolerance to a lethal pathogen Quantifying intraspecific variation in host resistance ad tolerance to a lethal pathogen

Testing for intraspecific variation for host tolerance or resistance in wild populations is important for informing conservation decisions about captive breeding, translocation, and disease treatment. Here, we test the importance of tolerance and resistance in multiple populations of boreal toads (Anaxyrus boreas boreas) against Batrachochytrium dendrobatidis (Bd), the amphibian fungal...
Authors
B. Hardy, Erin L. Muths, W. C. Funk, L. L. Bailey

Chronic wasting disease alters the movement behavior and habitat use of mule deer during clinical stages of infection Chronic wasting disease alters the movement behavior and habitat use of mule deer during clinical stages of infection

Integrating host movement and pathogen data is a central issue in wildlife disease ecology that will allow for a better understanding of disease transmission. We examined how adult female mule deer (Odocoileus hemionus) responded behaviorally to infection with chronic wasting disease (CWD). We compared movement and habitat use of CWD-infected deer (n = 18) to those that succumbed to...
Authors
Gabriel M. Barrile, Paul C. Cross, Cheynne Stewart, Jennifer L. Malmberg, Rhiannon P. Jakopak, Justin Binfet, Kevin Montieth, Brandon Werner, Jessica Jennings-Gaines, JA Merkle

Assessing wild turkey productivity before and after a 14-day delay in the start date of the spring hunting season in Tennessee Assessing wild turkey productivity before and after a 14-day delay in the start date of the spring hunting season in Tennessee

Ten state wildlife management agencies in the United States, including six within the Southeast, have delayed their spring wild turkey (Meleagris gallopavo) hunting seasons since 2017 by five or more days to address concerns related to the potential effects of hunting on wild turkey seasonal productivity. One hypothesis posits that if the spring hunting season is too early, there may be
Authors
Joseph O. Quehl, Lindsey M. Phillips, Vincent M. Johnson, Craig A. Harper, Joseph D. Clark, Roger D. Shields, David A. Buehler

Resilience is not enough: Toward a more meaningful rangeland adaptation science Resilience is not enough: Toward a more meaningful rangeland adaptation science

Rangeland ecosystems, and their managers, face the growing urgency of climate change impacts. Researchers are therefore seeking integrative social-ecological frameworks that can enhance adaptation by managers to these climate change dynamics through tighter linkages among multiple scientific disciplines and manager contexts. Social-ecological framings, including resilience and...
Authors
Hailey Wilmer, Daniel B. Ferguson, Maude Dinan, Eric Thacker, Peter B. Adler, Kathryn Bills Walsh, John B. Bradford, Mark Brunson, Justin D. Derner, Emile Elias, Andrew J Felton, Curtis A. Gray, Christina Greene, Mitchel P McClaran, Robert K. Shriver, Mitch Stephenson, Katharine Nash Suding

Accuracy, accessibility, and institutional capacity shape the utility of habitat models for managing and conserving rare plants on western public lands Accuracy, accessibility, and institutional capacity shape the utility of habitat models for managing and conserving rare plants on western public lands

Public lands are often managed for multiple uses ranging from energy development to rare plant conservation. Habitat models can help land managers assess and mitigate potential effects of projects on rare plants, but it is unclear how models are currently being used. Our goal was to better understand how staff in the Bureau of Land Management currently use habitat models to inform their...
Authors
Ella M. Samuel, Jennifer K. Meineke, Laine E. McCall, Lea B. Selby, Alison C. Foster, Zoe M. Davidson, Carol A. Dawson, Catherine S. Jarnevich, Sarah K. Carter

Geographic drivers of mercury entry into aquatic food webs revealed by mercury stable isotopes in dragonfly larvae Geographic drivers of mercury entry into aquatic food webs revealed by mercury stable isotopes in dragonfly larvae

Atmospheric mercury (Hg) emissions and subsequent transport and deposition are major concerns within protected lands, including national parks, where Hg can bioaccumulate to levels detrimental to human and wildlife health. Despite this risk to biological resources, there is limited understanding of the relative importance of different Hg sources and delivery pathways within protected...
Authors
Sarah E. Janssen, Christopher James Kotalik, James Willacker, Michael T. Tate, Colleen M Flanagan-Pritz, Sarah Nelson, David P. Krabbenhoft, David Walters, Collin A. Eagles-Smith

Greenness and actual evapotranspiration in the unrestored riparian corridor of the Colorado River Delta in response to in-channel water deliveries in 2021 and 2022 Greenness and actual evapotranspiration in the unrestored riparian corridor of the Colorado River Delta in response to in-channel water deliveries in 2021 and 2022

Natural resource managers may utilize remotely sensed data to monitor vegetation within their decision-making frameworks for improving habitats. Under binational agreements between the United States and Mexico, seven reaches were targeted for riparian habitat enhancement. Monitoring was carried out using Landsat 8 16-day intervals of the two-band enhanced vegetation index 2 (EVI2) for...
Authors
Pamela L. Nagler, Ibrahima Sall, Martha Gomez-Sapiens, Armando Barreto-Muñoz, Christopher J. Jarchow, Karl W. Flessa, Kamel Didan
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