Publications
This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.
Filter Total Items: 42702
Susceptibility of Pallid Sturgeon to viral hemorrhagic septicemia virus genotype IVb Susceptibility of Pallid Sturgeon to viral hemorrhagic septicemia virus genotype IVb
Objective Viral hemorrhagic septicemia virus (VHSV) is an aquatic rhabdovirus causing severe disease in freshwater and saltwater fish species. The susceptibility of endangered Pallid Sturgeon Scaphirhynchus albus to VHSV genotype IVb (VHSV-IVb) infection was investigated.Methods An in vitro assessment using two Pallid Sturgeon cell lines derived from skin and spleen tissue and in vivo...
Authors
Lacey R. Hopper, Jolene A. Glenn, Elizabeth MacConnell, James Winton, Eveline J. Emmenegger
A retrospective assessment of fuel break effectiveness for containing rangeland wildfires in the sagebrush biome A retrospective assessment of fuel break effectiveness for containing rangeland wildfires in the sagebrush biome
Escalated wildfire activity within the western U.S. has widespread societal impacts and long-term consequences for the imperiled sagebrush (Artemisia spp.) biome. Shifts from historical fire regimes and the interplay between frequent disturbance and invasive annual grasses may initiate permanent state transitions as wildfire frequency outpaces sagebrush communities’ innate capacity to...
Authors
Cali L. Weise, Brianne E. Brussee, Peter S. Coates, Douglas J. Shinneman, Michele R. Crist, Cameron L. Aldridge, Julie A. Heinrichs, Mark A. Ricca
Elevated road segment (ERS) passage design may provide enhanced connectivity for amphibians, reptiles, and small mammals Elevated road segment (ERS) passage design may provide enhanced connectivity for amphibians, reptiles, and small mammals
Introduction: Designs for safe and effective road crossing structures for small animals are typically under-road microtunnels and culverts which have varying levels of effectiveness reported in the scientific literature. Many species, particularly migratory amphibians, may have limited ability to find and use passages if they are too far apart, resulting in substantial barrier effects...
Authors
Cheryl S. Brehme, Stephanie Barnes, Brittany Ewing, Philip Robert Gould, Cassie Vaughan, Michael Hobbs, Charles Tornaci, Sarah Holm, Hanna Sheldon, Jon Fiutak, Robert N. Fisher
Comparison of historic to future without action (FWOA) land change Comparison of historic to future without action (FWOA) land change
One of the primary purposes of the 2023 Coastal Master Plan Integrated Compartment Model (ICM) is to forecast potential changes in coastal wetland area under varying environmental and restoration scenarios. To validate the model performance, historical analyses of observed wetland changes are needed for comparison to hindcast model runs. To generate these historical analyses, this effort...
Authors
Brady Couvillion
A 37 K SNP array for the management and conservation of Golden Eagles (Aquila chrysaetos) A 37 K SNP array for the management and conservation of Golden Eagles (Aquila chrysaetos)
We describe the development of a custom 37 K Affymetrix Axiom myDesign single nucleotide polymorphism (SNP) array for a culturally and ecologically important apex predator, the golden eagle (Aquila chrysaetos). Using this SNP array, we performed population genomic analysis on 154 individuals of known natal localities and detected three genetic clusters that we designated as Taiga/High...
Authors
Megan E. Judkins, Gary W. Roemer, Brian Millsap, Joseph G. Barnes, Bryan E. Bedrosian, Stephen L. Clarke, Robert Domenech, Garth Herring, Myles Lamont, Brian W. Smith, Dale W. Stahlecker, Matthew J. Stuber, Wesley C. Warren, Ronald A. Van Den Bussche
Ferruginous Hawk movements respond predictably to intra-annual variation but unexpectedly to anthropogenic habitats Ferruginous Hawk movements respond predictably to intra-annual variation but unexpectedly to anthropogenic habitats
Birds exhibit flexible movement responses to environmental variation across the annual cycle, and those responses can provide insight into potential impacts that environmental changes may have on these species. To understand year-round variation in space use by Ferruginous Hawks Buteo regalis, we tracked 12 birds breeding in southwestern Idaho, USA, using GPS telemetry collected over 207...
Authors
Georgia H. Isted, Robert J. Thomas, Kevin S. Warner, Matthew J. Stuber, Ethan A. Ellsworth, Todd E. Katzner
Plague mitigation for prairie dog and black-footed ferret conservation: Degree and duration of flea control with 0.005% fipronil grain bait Plague mitigation for prairie dog and black-footed ferret conservation: Degree and duration of flea control with 0.005% fipronil grain bait
Sylvatic plague, a primarily flea-borne zoonosis, is a significant threat to prairie dogs (Cynomys spp., PDs) and their specialized predators, endangered black-footed ferrets (Mustela nigripes, BFFs). Host-fed fipronil baits have proven effective in controlling fleas on PDs for the purposes of plague mitigation and BFF conservation. Currently, annual treatments are the norm. We tested...
Authors
David A. Eads, Travis. Livieri, Phillip Dobesh, John P. Hughes, Jason Fly, Holly Redmond, Eddie Childers, Matthew S. Schwarz, Dean E. Biggins
Establishing an in vitro model to assess the toxicity of 6PPD-quinone and other tire wear transformation products Establishing an in vitro model to assess the toxicity of 6PPD-quinone and other tire wear transformation products
The tire wear transformation product 6PPD-quinone (6PPDQ) has been implicated as the causative factor for broad scale mortality events for coho salmon in the Pacific Northwest. Highly variable sensitivity to 6PPDQ in closely related salmonids complicates efforts to evaluate the broader toxicological impacts to aquatic ecosystems. Our goals were to (1) validate the large range of in vivo...
Authors
Justin Blaine Greer, Ellie Maureen Dalsky, Rachael F. Lane, John Hansen
Tree symbioses sustain nitrogen fixation despite excess nitrogen supply Tree symbioses sustain nitrogen fixation despite excess nitrogen supply
Symbiotic nitrogen fixation (SNF) is a key ecological process whose impact depends on the strategy of SNF regulation—the degree to which rates of SNF change in response to limitation by N versus other resources. SNF that is obligate or exhibits incomplete downregulation can result in excess N fixation, whereas a facultative SNF strategy does not. We hypothesized that tree-based SNF...
Authors
Duncan N.L. Menge, Amelia A. Wolf, Jennifer L. Funk, Steven Perakis, Palani R. Akana, Rachel Arkebauer, Thomas A. Bytnerowicz, K. A. Carreras Pereira, Alexandra M. Huddell, Sian Kou-Giesbrecht, Sarah K. Ortiz
Is now the time? Review of genetic rescue as a conservation tool for brook trout Is now the time? Review of genetic rescue as a conservation tool for brook trout
Brook trout populations have been declining throughout their native range in the east coast of the United States. Many populations are now distributed in small, isolated habitat patches where low genetic diversity and high rates of inbreeding reduce contemporary viability and long-term adaptive potential. Although human-assisted gene flow could theoretically improve conservation outcomes...
Authors
Shannon L. White, Jacob M Rash, David C. Kazyak
Application of habitat association models across regions: Useful explanatory power retained in wetland bird case study Application of habitat association models across regions: Useful explanatory power retained in wetland bird case study
Species often exhibit regionally specific habitat associations, so habitat association models developed in one region might not be accurate or even appropriate for other regions. Three programs to survey wetland-breeding birds covering (respectively) Great Lakes coastal wetlands, inland Great Lakes wetlands, and the Prairie Pothole Region offer an opportunity to test whether regionally...
Authors
Lisa H. Elliott, Annie M. Bracey, Gerald J. Niemi, Douglas H. Johnson, Thomas M. Gehring, Erin E. Gnass Giese, Giuseppe E. Fiorino, Robert W. Howe, Gregory A. Lawrence, Christopher J. Norment, Douglas C. Tozer, Lawrence Igl
Gene expression and wildlife health: Varied interpretations based on perspective Gene expression and wildlife health: Varied interpretations based on perspective
We evaluated wildlife population health from the perspective of statistical means vs. variances. We outlined the choices necessary to provide the framework for our study. These consisted of spatial and temporal boundaries (e.g., choice of sentinel species, populations, time frame), measurement techniques (molecular to population level), and appropriate statistical analyses. We chose to...
Authors
Lizabeth Bowen, Julie L. Yee, James L. Bodkin, Shannon C. Waters-Dynes, Michael J. Murray, Heather Coletti, Brenda E. Ballachey, Daniel Monson, A. Keith Miles