Publications
This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.
Filter Total Items: 42777
Hydrogeomorphological controls on reach‐scale distributions of cichlid nest sites in a small neotropical river Hydrogeomorphological controls on reach‐scale distributions of cichlid nest sites in a small neotropical river
The Cichlidae are among the most diversified families of fish in the Neotropics and represent an important component of aquatic biodiversity. Understanding cichlid nest‐site selection is important for assemblages facing uncertain futures due to species invasions and environmental change. This information could be used to predict how inter‐ and intraspecific competition for reproductive...
Authors
Emily A. Buege, Peter C. Esselman, Sarah J. Praskievicz
Development of genetic baseline information to support the conservation and management of wild Brook Trout in North Carolina Development of genetic baseline information to support the conservation and management of wild Brook Trout in North Carolina
Following centuries of declines, there is growing interest in conserving extant wild populations and reintroducing Brook Trout (Salvelinus fontinalis) populations of native ancestry. A population genetic baseline can enhance conservation outcomes and promote restoration success. Consequently, it is important to document existing patterns of genetic variation across the landscape and...
Authors
David C. Kazyak, Barbara A. Lubinski, Jacob M Rash, Thomas C Johnson, Timothy L. King
A global perspective on the influence of the COVID-19 pandemic on freshwater fish biodiversity A global perspective on the influence of the COVID-19 pandemic on freshwater fish biodiversity
The COVID-19 global pandemic and resulting effects on the economy and society (e.g., sheltering-in-place, alterations in transportation, changes in consumer behaviour, loss of employment) have yielded some benefits and risks to biodiversity. Here, we considered the ways the COVID-19 pandemic has influenced (or may influence) freshwater fish biodiversity (e.g., richness, abundance). In...
Authors
Steve J. Cooke, William M. Twardek, Abigail J. Lynch, Ian G. Cowx, Julian D. Olden, Simon Funge-Smith, Kai Lorenzen, Robert Arlinghaus, Yushen Chen, Olaf L. F. Weyl, Elizabeth A. Nyboer, Paulo S. Pompeu, Stephanie M. Carlson, John D. Koehn, Adrian C. Pinder, Rajeev Raghavan, Sui C. Phang, Aaron A. Koning, William W. Taylor, Devin M. Bartley, J. Robert Britton
Strategic habitat conservation for beach mice: Estimating management scenario efficiencies Strategic habitat conservation for beach mice: Estimating management scenario efficiencies
The Perdido Key beach mouse (Peromyscus polionotus trissyllepsis), Choctawhatchee beach mouse (P. p. allophrys), and St. Andrew beach mouse (P. p. peninsularis) are 3 federally endangered subspecies that inhabit coastal dunes of Alabama and Florida, USA. Conservation opportunities for these subspecies are limited and costly. Consequently, well‐targeted efforts are required to achieve...
Authors
James P. Cronin, Blair Tirpak, Leah L. Dale, Virginia L. Robenski, John M. Tirpak, Bruce G. Marcot
Fish out of water: Insights from a case study of a highly social animal that failed the mirror self-recognition test Fish out of water: Insights from a case study of a highly social animal that failed the mirror self-recognition test
Mirror self-recognition (MSR) tests have been conducted with a variety of species with the aim of examining whether subject animals have the capacity for self-awareness. To date, the majority of animals that have convincingly passed are highly social mammals whose wild counterparts live in complex societies, though there is much debate concerning what constitutes passing and what passing...
Authors
Shannon Barber-Meyer, Lori J. Schmidt
Editorial: Plant-soil interactions under changing climate Editorial: Plant-soil interactions under changing climate
The health and well-being of plants and soil is crucial for all life on Earth. It is well-known that vegetation cover follows climatic zones, and plants respond to climatic drivers such as temperature and precipitation (Seddon et al., 2016; Kattge et al., 2020). It is also well-known that plant health depends on the properties and health of the soil (Ephrath et al., 2020), and that...
Authors
Sanna Sevanto, Charlotte Grossiord, Tamir Klein, Sasha C. Reed
Evidence for continental-scale dispersal of antimicrobial resistant bacteria by landfill-foraging gulls Evidence for continental-scale dispersal of antimicrobial resistant bacteria by landfill-foraging gulls
Anthropogenic inputs into the environment may serve as sources of antimicrobial resistant bacteria and alter the ecology and population dynamics of synanthropic wild animals by providing supplemental forage. In this study, we used a combination of phenotypic and genomic approaches to characterize antimicrobial resistant indicator bacteria, animal telemetry to describe host movement...
Authors
Christina Ahlstrom, Marielle L. van Toor, Hanna Woksepp, Jeffrey C Chandler, John Reed, Andrew B. Reeves, Jonas Waldenström, Alan B. Franklin, David C. Douglas, Jonas Bonnedahl, Andrew M. Ramey
Effective population size remains a suitable, pragmatic indicator of genetic diversity for all species, including forest trees Effective population size remains a suitable, pragmatic indicator of genetic diversity for all species, including forest trees
Fady & Bozzano highlight some challenges to a proposed Convention on Biological Diversity (CBD) indicator of genetic diversity based on effective population size, Ne (Fady and Bozzano, 2020; Hoban et al., 2020). We appreciate the thoughtful debate and concur that genetic diversity indicators must be reliable and scalable. We fully agree that “genetic diversity should be better considered...
Authors
Sean M. Hoban, Ivan Paz-Vinas, Sally Aitken, Laura D. Bertola, Martin F Breed, Michael W. Bruford, W. Chris Funk, Catherine E. Grueber, Myriam Heuertz, Paul A. Hohenlohe, Margaret Hunter, Rodolfo Jaffé, Margarida Lopes Fernandes, Joachim Mergeay, Farideh Moharrek, David O’Brien, Gernot Segelbacher, Cristiano Vernesi, Lisette Waits, Linda Laikre
Book review of "Plant anatomy—A concept based approach to the structure of seed plants" Book review of "Plant anatomy—A concept based approach to the structure of seed plants"
Plant Anatomy: A Concept-Based Approach to the Structure of Seed Plants by Crang, Lyons-Sobaski, and Wise is a beautifully-illustrated, 600+ page textbook highlighting the wonderful diversity of anatomical form in plants. The layout of the chapters follows many traditional plant anatomy textbooks. Plant Anatomy begins with an overview of plant morphology and proceeds through evolutionary...
Authors
Daniel E. Winkler
Diet and bathymetric distribution of juvenile Lake Trout Salvelinus namaycush in Lake Huron Diet and bathymetric distribution of juvenile Lake Trout Salvelinus namaycush in Lake Huron
Rehabilitation efforts for Lake Trout Salvelinus namaycush in Lake Huron have resulted in increased capture of young wild Lake Trout in annual bottom trawl surveys conducted by the U.S. Geological Survey. To better understand the ecology of juvenile (
Authors
Edward F. Roseman, Stephen Riley, Taaja Tucker, Steve A. Farha, Scott Jackson, Dustin Bowser
Upper Colorado River Basin 20th century droughts under 21st century warming: Plausible scenarios for the future Upper Colorado River Basin 20th century droughts under 21st century warming: Plausible scenarios for the future
This study builds on a collaboration with a water resource management community of practice in the Upper Colorado River Basin to develop scenarios of future drought and assess impacts on water supply reliability. Water managers are concerned with the impacts of warming on water year streamflow, but uncertainties in projections of climate make the application of these projections to...
Authors
Connie A. Woodhouse, Rebecca M. Smith, Stephanie A. McAfee, Gregory T. Pederson, Gregory J. McCabe, W. Paul Miller, Adam Csank
Assessing contributions of cold-water refuges to reproductive migration corridor conditions for adult salmon and steelhead trout in the Columbia River, USA Assessing contributions of cold-water refuges to reproductive migration corridor conditions for adult salmon and steelhead trout in the Columbia River, USA
Diadromous fish populations face multiple challenges along their migratory routes. These challenges include suboptimal water quality, harvest, and barriers to longitudinal and lateral connectivity. Interactions among factors influencing migration success make it challenging to assess management options for improving migratory fish conditions along riverine migration corridors. We...
Authors
Marcia N. Snyder, Nathan H. Schumaker, Jason B. Dunham, Matthew Keefer, Peter Leinenbach, Allen Brookes, John Palmer, Jennifer Wu, Druscilla M Keenan, Joseph L. Ebersole