Publications
This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.
Filter Total Items: 42707
Gene transcript profiling in desert bighorn sheep Gene transcript profiling in desert bighorn sheep
Respiratory disease is a key factor affecting the conservation and recovery of bighorn sheep (Ovis canadensis ) populations. Innovative, minimally invasive tools such as gene transcription–based diagnostics have the potential to improve our understanding of the broad range of factors that can affect the health of wild sheep. Evaluation of transcript levels for genes representative of...
Authors
Lizabeth Bowen, Kathleen Longshore, Peregrine Wolff, Robert C. Klinger, Mike Cox, Sarah Bullock, Shannon C. Waters-Dynes, A. Keith Miles
Environmental DNA: An emerging tool for understanding aquatic biodiversity Environmental DNA: An emerging tool for understanding aquatic biodiversity
Field surveys for aquatic organisms provide critical information that is important for robust resource management. However, such surveys are expensive and labor intensive, particularly in large, remote landscapes like those that characterize much of Alaska. Traditionally, characterizing aquatic biodiversity necessitated the physical capture and identification of individual organisms...
Authors
Trey Simmons, Damian M. Menning, Sandra L. Talbot
Evaluation of water temperature effects on adult sockeye salmon (Oncorhynchus nerka) behavior in the Yakima River, Washington, 2019 Evaluation of water temperature effects on adult sockeye salmon (Oncorhynchus nerka) behavior in the Yakima River, Washington, 2019
A study was conducted in the lower Yakima River, Washington, during June–October 2019 to evaluate water temperature effects on adult sockeye salmon (Oncorhynchus nerka) behavior. A total of 60 sockeye salmon adults were tagged with radio transmitters and monitored during the study. Fourteen of the fish were collected and tagged at Prosser Dam in late June and the remainder were collected...
Authors
Tobias J. Kock, Scott D. Evans, Amy C. Hansen, Brian K. Ekstrom, Richard Visser, Brian Saluskin, Paul Hoffarth
Coming to terms with the new normal: Forest health in the Sierra Nevada Coming to terms with the new normal: Forest health in the Sierra Nevada
The vast conifer forests of California’s Sierra Nevada range inspire awe and create lasting memories. The size and longevity of these trees make them seem both otherworldly and everlasting. Indeed, their grandeur is such that visitors may not appreciate how these forests are connected to the larger landscape, and so there is little understanding that something as common as a drought...
Authors
Jodi Axelson, John J. Battles, Adrian J. Das, Phillip J. van Mantgem
Combining models of the critical streakline and the cross-sectional distribution of juvenile salmon to predict fish routing at river junctions Combining models of the critical streakline and the cross-sectional distribution of juvenile salmon to predict fish routing at river junctions
Because fish that enter the interior Delta have poorer survival than those emigrating via the Sacramento River, understanding the mechanisms that drive entrainment rates at side channel junctions is critically important for the management of imperiled juvenile salmon. Here, we implement a previously proposed process-based conceptual model to study entrainment rates based on three linked...
Authors
Dalton Hance, Russell Perry, Jon R. Burau, Aaron R. Blake, Paul Stumpner, Xiaochun Wang, Adam Pope
Lake Ontario fall benthic prey fish assessment Lake Ontario fall benthic prey fish assessment
No abstract available.
Authors
Jeremy P. Holden, Brian Weidel, Michael J. Connerton, Brian P. O’Malley, C. Osborne
Lake Ontario spring prey fish assessment Lake Ontario spring prey fish assessment
No abstract available.
Authors
Jeremy P. Holden, Brian Weidel, Michael J. Connerton
A multiscale approach to understanding migratory land bird habitat use of functional stopover habitat types and management efforts A multiscale approach to understanding migratory land bird habitat use of functional stopover habitat types and management efforts
It is hard to believe that many of the small “backyard birds” people see during spring and autumn can make migratory journeys that span thousands of kilometers. In fact, over two-thirds of all land birds (i.e., those not associated with aquatic habitats) and over half of the migratory species in North America move long distances to areas in Mexico, Central and South America, and the...
Authors
Theodore J. Zenzal
Species and genetic diversity in Lake Huron in 2018 Species and genetic diversity in Lake Huron in 2018
Fish community objectives (FCOs) for species and genetic diversity (DesJardine et al. 1995) complement the species- or genera-specific objectives by recognizing that diversity within and among species can improve ecosystem resiliency through portfolio effects (DuFour et al. 2015). In Lake Huron, native species (such as Lake Trout and Lake Whitefish), and non-native species (such as...
Authors
Wendylee Stott, Edward F. Roseman, Chris C. Wilson
Lake trout rehabilitation in Lake Ontario, 2019 Lake trout rehabilitation in Lake Ontario, 2019
Each year we report on the progress toward rehabilitation of the Lake Ontario lake trout (Salvelinus namaycush) population, including the results of stocking, annual assessment surveys, creel surveys, and evidence of natural reproduction observed from all standard surveys performed by USGS and NYSDEC. The catch per unit effort of adult lake trout in gill nets increased each year from...
Authors
Brian F. Lantry, Stacy Furgal, Brian Weidel, Michael Connerton, Dimitry Gorsky, Christopher Osborne
Lake trout spawning studies: Updates, new survey, and comparison to standard September gillnet survey Lake trout spawning studies: Updates, new survey, and comparison to standard September gillnet survey
In Lake Ontario, lake trout restoration efforts have not established a self-sustaining population. Herein we describe efforts to evaluate standard and new surveys, and to estimate dispersal from stocking locations, to better understand impediments to natural reproduction. In 2019, lake trout egg deposition was sampled at two locations, Stony Island Reef, and Ford Shoals. No eggs were...
Authors
Stacy Furgal, Christopher Osborne, Brian F. Lantry, Brian Weidel, Dimitry Gorsky, Michael Connerton
Bottom trawl assessment of Lake Ontario prey fishes, 2019 Bottom trawl assessment of Lake Ontario prey fishes, 2019
Multi-agency, collaborative Lake Ontario bottom trawl surveys provide information for decision making related to Fish Community Objectives including predator-prey balance and understanding prey fish community diversity. In 2019, bottom trawl surveys in April (n = 252 tows) and October (n = 160 tows) sampled main lake and embayments at depths from 5–226 m. Combined, the surveys captured...
Authors
Brian Weidel, Brian O’Malley, Michael J. Connerton, Jeremy P. Holden, Christopher Osborne