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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 42702

Incorporating Allee effects into the potential biological removal level Incorporating Allee effects into the potential biological removal level

Potential biological removal (PBR) is an approach used to calculate sustainable harvest and “take” limits for populations. PBR was originally derived assuming logistic growth while ignoring the effects of small population size (i.e., an Allee effect). We derived a version of PBR that includes an Allee effect (i.e., small population size or densities limiting population growth rates). We...
Authors
Humza Hadier, Sarah Oldfield, Tiffany Tu, Rosa Moreno, Jay E. Diffendorfer, Eric A. Eager, Richard A. Erickson

Final Report fr critical thresholds and ecosystem services for coastal ecological and human climate adaptation Final Report fr critical thresholds and ecosystem services for coastal ecological and human climate adaptation

Understanding how climate change will impact natural and human communities is a crucial part of decision making and management related to the protection of our coasts. As the effects of climate change on ecological communities grow, the possibility of crossing tipping points or thresholds of viability increases the potential for rapid and possibly irreversible changes in ecosystems...
Authors
Michelle D. Staudinger, Emily J. Powell, Andrew Milliken, Megan C. Tyrrell

Model selection for the North American Breeding Bird Survey: A comparison of methods Model selection for the North American Breeding Bird Survey: A comparison of methods

The North American Breeding Bird Survey (BBS) provides data for >420 bird species at multiple geographic scales over 5 decades. Modern computational methods have facilitated the fitting of complex hierarchical models to these data. It is easy to propose and fit new models, but little attention has been given to model selection. Here, we discuss and illustrate model selection using leave...
Authors
William A. Link, John R. Sauer, Daniel Niven

Mapping the change of Phragmites australis live biomass in the lower Mississippi River Delta marshes Mapping the change of Phragmites australis live biomass in the lower Mississippi River Delta marshes

Multiyear remote sensing mapping of the normalized difference vegetation index (NDVI) was carried out as an indicator of live biomass composition of the Phragmites australis (hereafter Phragmites) marsh in the lower Mississippi River Delta (hereafter delta) from 2014 to 2017. Maps of NDVI change showed that the Phragmites condition was fairly stable between May 2014 and July 2015. From...
Authors
Elijah W. Ramsey, Amina Rangoonwala

The first 50 years of the North American Breeding Bird Survey The first 50 years of the North American Breeding Bird Survey

The vision of Chandler (Chan) S. Robbins for a continental-scale omnibus survey of breeding birds led to the development of the North American Breeding Bird Survey (BBS). Chan was uniquely suited to develop the BBS. His position as a government scientist had given him experience with designing and implementing continental-scale surveys, his research background made him an effective...
Authors
John R. Sauer, David Ziolkowski, Keith L. Pardieck, Adam C. Smith, Marie-Anne R. Hudson, Vicente Rodriguez, Humberto Berlanga, Daniel Niven, William A. Link

Tackling an intractable problem: Can greater taxon sampling help resolve relationships within the Stenopelmatoidea (Orthoptera: Ensifera)? Tackling an intractable problem: Can greater taxon sampling help resolve relationships within the Stenopelmatoidea (Orthoptera: Ensifera)?

The relationships among and within the families that comprise the orthopteran superfamily Stenopelmatoidea (suborder Ensifera) remain poorly understood. We developed a phylogenetic hypothesis based on Bayesian analysis of two nuclear ribosomal and one mitochondrial gene for 118 individuals (84 de novo and 34 from GenBank). These included Gryllacrididae from North, Central, and South...
Authors
Amy G. Vandergast, David B Weissman, Dustin Wood, David C F Rentz, Corinna S Bazelet, Norihiro Ueshima

At a global scale, do climate change threatened species also face a greater number of non-climatic threats? At a global scale, do climate change threatened species also face a greater number of non-climatic threats?

For many species the threats of climate change occur in a context of multiple existing threats. Given the current focus of global change ecology in identifying and understanding species vulnerable to climate change, we performed a global analysis to characterize the multi-threat context for species threatened by climate change. Utilizing 30,053 species from the International Union for...
Authors
Lucas B. Fortini, Kaipo Dye

Evapotranspiration by remote sensing: An analysis of the Colorado River Delta before and after the Minute 319 pulse flow to Mexico Evapotranspiration by remote sensing: An analysis of the Colorado River Delta before and after the Minute 319 pulse flow to Mexico

The unique hydrologic conditions characterizing riparian ecosystems in dryland (arid and semi-arid) areas help maintain high biodiversity and support high levels of primary productivity compared to associated uplands. In western North America, many riparian ecosystems have been damaged by altered flow regimes (e.g., impoundments and diversions) and over utilization of water resources (e...
Authors
Christopher J. Jarchow, Pamela L. Nagler, Edward P. Glenn, Jorge Ramirez-Hernandez, Eliana Rodriguez-Burgueno

Greenup and evapotranspiration following the Minute 319 pulse flow to Mexico: An analysis using Landsat 8 Normalized Difference Vegetation Index (NDVI) data Greenup and evapotranspiration following the Minute 319 pulse flow to Mexico: An analysis using Landsat 8 Normalized Difference Vegetation Index (NDVI) data

In the southwestern U.S., many riparian ecosystems have been altered by dams, water diversions, and other anthropogenic activities. This is particularly true of the Colorado River, where numerous dams and agricultural diversions have affected this water course, especially south of the U.S.–Mexico border. In the spring of 2014, 130 million cubic meters of water was released to the lower...
Authors
Christopher J. Jarchow, Pamela L. Nagler, Edward P. Glenn

Integrating Breeding Bird Survey and demographic data to estimate Wood Duck population size in the Atlantic Flyway Integrating Breeding Bird Survey and demographic data to estimate Wood Duck population size in the Atlantic Flyway

The U.S. Fish and Wildlife Service (USFWS) uses data from the North American Breeding Bird Survey (BBS) to assist in monitoring and management of some migratory birds. However, BBS analyses provide indices of population change rather than estimates of population size, precluding their use in developing abundance-based objectives and limiting applicability to harvest management. Wood...
Authors
Guthrie S. Zimmerman, John R. Sauer, G. Scott Boomer, Patrick K. Devers, Pamela R. Garrettson

Use of North American Breeding Bird Survey data in avian conservation assessments Use of North American Breeding Bird Survey data in avian conservation assessments

Conservation resources are limited, and prioritizing species based on their relative vulnerability and risk of extinction is a fundamental component of conservation planning. In North America, the conservation consortium Partners in Flight (PIF) has developed and implemented a data-driven species assessment process, at global and regional scales, based on quantitative vulnerability...
Authors
Kenneth V. Rosenberg, Peter J. Blancher, Jessica C. Stanton, Arvind O. Panjabi

Detect and exploit hidden structure in fatty acid signature data Detect and exploit hidden structure in fatty acid signature data

Estimates of predator diet composition are essential to our understanding of their ecology. Although several methods of estimating diet are practiced, methods based on biomarkers have become increasingly common. Quantitative fatty acid signature analysis (QFASA) is a popular method that continues to be refined and extended. Quantitative fatty acid signature analysis is based on...
Authors
Jeffrey F. Bromaghin, Suzanne M. Budge, Gregory W. Thiemann
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