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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 42999

Benefits of the destinations, not costs of the journeys, shape partial migration patterns Benefits of the destinations, not costs of the journeys, shape partial migration patterns

1. The reasons that lead some animals to seasonally migrate, and others to remain in the same area year-round, are poorly understood. Associations between traits, such as body size, and migration provide clues. For example, larger species and individuals are more likely to migrate. 2. One explanation for this size bias in migration is that larger animals are capable of moving faster...
Authors
Charles B. Yackulic, Stephen Blake, Guillaume Bastille-Rousseau

The Nitrogen Footprint Tool network: A multi-institution program to reduce nitrogen pollution The Nitrogen Footprint Tool network: A multi-institution program to reduce nitrogen pollution

Anthropogenic sources of reactive nitrogen have local and global impacts on air and water quality and detrimental effects on human and ecosystem health. This paper uses the nitrogen footprint tool (NFT) to determine the amount of nitrogen (N) released as a result of institutional consumption. The sectors accounted for include food (consumption and upstream production), energy...
Authors
Elizabeth A. Castner, Allison M. Leah, Neal Leary, Jill Baron, Jana E. Compton, James N. Galloway, Meredith G. Hastings, Jacob Kimiecik, Jonathan Lantz-Trissel, Elizabeth de la Riguera, Rebecca Ryals

Low-pathogenic influenza A viruses in North American diving ducks contribute to the emergence of a novel highly pathogenic influenza A(H7N8) virus Low-pathogenic influenza A viruses in North American diving ducks contribute to the emergence of a novel highly pathogenic influenza A(H7N8) virus

Introductions of low-pathogenic avian influenza (LPAI) viruses of subtypes H5 and H7 into poultry from wild birds have the potential to mutate to highly pathogenic avian influenza (HPAI) viruses, but such viruses' origins are often unclear. In January 2016, a novel H7N8 HPAI virus caused an outbreak in turkeys in Indiana, USA. To determine the virus's origin, we sequenced the genomes of...
Authors
Yifei Xu, Andrew M. Ramey, Andrew S. Bowman, Thomas J. DeLiberto, Mary L. Killian, Scott Krauss, Jacqueline M. Nolting, Mia Kim Torchetti, Andrew B. Reeves, Richard J. Webby, David E. Stallknecht, Xiu-Feng Wan

Optimization of a Plaque Neutralization Test (PNT) to identify the exposure history of Pacific Herring to viral hemorrhagic septicemia virus (VHSV) Optimization of a Plaque Neutralization Test (PNT) to identify the exposure history of Pacific Herring to viral hemorrhagic septicemia virus (VHSV)

Methods for a plaque neutralization test (PNT) were optimized for the detection and quantification of viral hemorrhagic septicemia virus (VHSV) neutralizing activity in the plasma of Pacific Herring Clupea pallasii. The PNT was complement dependent, as neutralizing activity was attenuated by heat inactivation; further, neutralizing activity was mostly restored by the addition of...
Authors
Lucas Hart, Ashley MacKenzie, Maureen K. Purcell, Rachel L. Thompson, Paul Hershberger

Geomorphic process from topographic form: automating the interpretation of repeat survey data in river valleys Geomorphic process from topographic form: automating the interpretation of repeat survey data in river valleys

The ability to quantify the processes driving geomorphic change in river valley margins is vital to geomorphologists seeking to understand the relative role of transport mechanisms (e.g. fluvial, aeolian, and hillslope processes) in landscape dynamics. High-resolution, repeat topographic data are becoming readily available to geomorphologists. By contrasting digital elevation models...
Authors
Alan Kasprak, Joshua J. Caster, Sara G. Bangen, Joel B. Sankey

Effects of experimental removal of barred owls on population demography of northern spotted owls in Washington and Oregon—2016 progress report Effects of experimental removal of barred owls on population demography of northern spotted owls in Washington and Oregon—2016 progress report

Evidence indicates that competition with invasive barred owls (Strix varia) is causing rapid declines in populations of northern spotted owls (S. occidentalis caurina), and that the long-term persistence of spotted owls may be in question without additional management intervention. A pilot study in California showed that removal of barred owls in combination with habitat conservation may...
Authors
J. David Wiens, Katie M. Dugger, Krista E. Lewicki, David C. Simon

Integrated species distribution models: combining presence-background data and site-occupancy data with imperfect detection Integrated species distribution models: combining presence-background data and site-occupancy data with imperfect detection

Two main sources of data for species distribution models (SDMs) are site-occupancy (SO) data from planned surveys, and presence-background (PB) data from opportunistic surveys and other sources. SO surveys give high quality data about presences and absences of the species in a particular area. However, due to their high cost, they often cover a smaller area relative to PB data, and are...
Authors
Vira Koshkina, Yang Wang, Ascelin Gordon, Robert Dorazio, Matthew White, Lewi Stone

Simulation of rapid ecological change in Lake Ontario Simulation of rapid ecological change in Lake Ontario

Lower trophic level processes are integral to proper functioning of large aquatic ecosystems and have been disturbed in Lake Ontario by various stressors including exotic species. The invasion of benthic habitats by dreissenid mussels has led to systemic changes and native faunal declines. Size-dependent physiological rates, spatial differences and connectivity, competition, and...
Authors
James E. McKenna, Marc Chalupnicki, Dawn E. Dittman, James M. Watkins

Assessing pollinator habitat services to optimize conservation programs Assessing pollinator habitat services to optimize conservation programs

Pollination services have received increased attention over the past several years, and protecting foraging area is beginning to be reflected in conservation policy. This case study considers the prospects for doing so in a more analytically rigorous manner, by quantifying the pollination services for sites being considered for ecological restoration. The specific policy context is the
Authors
Richard Iovanna, Amy W. Ando, Scott Swinton, Daniel Hellerstein, Jimmy Kagan, David M. Mushet, Clint Otto, Charles A. Rewa

Facilitating adaptation in montane plants to changing precipitation along an elevation gradient Facilitating adaptation in montane plants to changing precipitation along an elevation gradient

Montane plant communities throughout the world have responded to changes in precipitation and temperature regimes by shifting ranges upward in elevation. Continued warmer, drier climate conditions have been documented and are projected to increase in high-elevation areas in Hawai‘i, consistent with climate change effects reported in other environments throughout the world. Organisms that...
Authors
Steve C. Hess, Christina Leopold

Environmental Escherichia coli: Ecology and public health implications - A review Environmental Escherichia coli: Ecology and public health implications - A review

Escherichia coli is classified as a rod-shaped, Gram-negative bacterium in the family Enterobacteriaceae. The bacterium mainly inhabits the lower intestinal tract of warm-blooded animals, including humans, and is often discharged into the environment through feces or wastewater effluent. The presence of E. coli in environmental waters has long been considered as an indicator of recent...
Authors
Jeonghwan Jang, Hor-Gil Hur, Michael J. Sadowsky, Muruleedhara Byappanahalli, Tao Yan, Satoshi Ishii
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