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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 42712

Mercury bioaccumulation in estuarine fishes: Novel insights from sulfur stable isotopes Mercury bioaccumulation in estuarine fishes: Novel insights from sulfur stable isotopes

Estuaries are transitional habitats characterized by complex biogeochemical and ecological gradients that result in substantial variation in fish total mercury concentrations (THg). We leveraged these gradients and used carbon (δ13C), nitrogen (δ15N), and sulfur (δ34S) stable isotopes to examine the ecological and biogeochemical processes underlying THg bioaccumulation in fishes from the...
Authors
James J. Willacker, Collin A. Eagles-Smith, Joshua T. Ackerman

Nutrients, phytoplankton, zooplankton, and macrobenthos Nutrients, phytoplankton, zooplankton, and macrobenthos

Lower trophic levels support the prey fish on which most sport fish depend. Therefore, understanding the production potential of lower trophic levels is integral to the management of Lake Ontario’s fishery resources. Lower trophic-level productivity differs among offshore and nearshore waters. In the offshore, there is concern about the ability of the lake to support Alewife (Table 1)...
Authors
Lars G. Rudstam, Kristen T. Holeck, James M. Watkins, Christopher Hotaling, Jana R. Lantry, Kelly L. Bowen, Mohi Munawar, Brian Weidel, Richard Barbiero, Frederick J. Luckey, Alice Dove, Timothy B. Johnson, Zy Biesinger

Disentangling the complexities of how legumes and their symbionts regulate plant nitrogen access and storage Disentangling the complexities of how legumes and their symbionts regulate plant nitrogen access and storage

Nitrogen (N) availability strongly influences the structure and function of ecosystems (e.g. Vitousek & Howarth, 1991), but only a relatively small number of microbial groups have the ability to convert the N2 in our atmosphere into biologically available forms.This process, N2 fixation, is the dominant source of new N to the biosphere outside of anthropogenic inputs (Vitousek et al., 2013...
Authors
Sasha C. Reed

Infectious hematopoietic necrosis virus virological and genetic surveillance 2000–2012 Infectious hematopoietic necrosis virus virological and genetic surveillance 2000–2012

Surveillance records of the acute RNA pathogen of Pacific salmonid fish infectious hematopoietic necrosis virus are combined for the first time to enable landscape-level ecological analyses and modeling. The study area is the freshwater ecosystems of the large Columbia River watershed in the U.S. states of Washington, Oregon, and Idaho, as well as coastal rivers in Washington and Oregon...
Authors
Rachel Breyta, Ilana L. Brito, Gael Kurath, Shannon L. LaDeau

Time within reproductive season, but not age or inbreeding coefficient, influences seminal and sperm quality in the whooping crane (Grus americana) Time within reproductive season, but not age or inbreeding coefficient, influences seminal and sperm quality in the whooping crane (Grus americana)

All living whooping cranes (Grus americana) are descended from 16 or fewer birds that remained alive in the early 1940s, a bottleneck that puts the species at potential risk for inbreeding depression. Although AI is commonly used in the management of the captive population of this species, little is known about seminal traits or factors affecting sperm quality in the whooping crane. In...
Authors
M.E. Brown, Sarah J. Converse, Jane N. Chandler, A. L. Crosier, W. Lynch, D.E. Wildt, C. L. Keefer, Nucharin Songsasen

Acoustic assessment of pelagic planktivores, 2016 Acoustic assessment of pelagic planktivores, 2016

Alewife (Alosa pseudoharengus) and Rainbow Smelt (Osmerus mordax) are the most abundant pelagic planktivores in Lake Ontario (Weidel et al 2017), and the most important prey for salmon and trout, making up greater than 90% of the diet of the top predator, Chinook salmon (Lantry 2001, Brandt 1986), and supporting a multimillion dollar sportfishery. Alewife are also important prey for warm...
Authors
Jeremy P. Holden, Michael J. Connerton, Brian Weidel

Salinity influences on aboveground and belowground net primary productivity in tidal wetlands Salinity influences on aboveground and belowground net primary productivity in tidal wetlands

Tidal freshwater wetlands are one of the most vulnerable ecosystems to climate change and rising sea levels. However salinification within these systems is poorly understood, therefore, productivity (litterfall, woody biomass, and fine roots) were investigated on three forested tidal wetlands [(1) freshwater, (2) moderately saline, and (3) heavily salt-impacted] and a marsh along the...
Authors
Kathryn N. Pierfelice, B. Graeme Lockaby, Ken W. Krauss, William H. Conner, Gregory E. Noe, Matthew C. Ricker

Declining survival of black brant from subarctic and arctic breeding areas Declining survival of black brant from subarctic and arctic breeding areas

Since the mid 1990s, the number of black brant (Branta bernicla nigricans; brant) nests on the Yukon‐Kuskokwim Delta (YKD), Alaska, USA, the historically predominant breeding area of brant, has declined steadily. This has caused researchers and managers to question if arctic breeding populations can compensate for the reduction in brant nests on the YKD. An important component of the...
Authors
Alan G. Leach, David H. Ward, James S. Sedinger, Mark S. Lindberg, W. Sean Boyd, Jerry W. Hupp, Robert J. Ritchie

Modeling waterfowl habitat selection in the Central Valley of California to better understand the spatial relationship between commercial poultry and waterfowl Modeling waterfowl habitat selection in the Central Valley of California to better understand the spatial relationship between commercial poultry and waterfowl

Wildlife researchers frequently study resource and habitat selection of wildlife to understand their potential habitat requirements and to conserve their populations. Understanding wildlife spatial-temporal distributions related to habitat have other applications such as to model interfaces between wildlife and domestic food animals in order to mitigate disease transmission to food...
Authors
Elliott Matchett, Michael L. Casazza, Joseph P. Fleskes, T. Kelman, M. Cadena, M. Pitesky

Improved vertical streambed flux estimation using multiple diurnal temperature methods in series Improved vertical streambed flux estimation using multiple diurnal temperature methods in series

Analytical solutions that use diurnal temperature signals to estimate vertical fluxes between groundwater and surface water based on either amplitude ratios (Ar) or phase shifts (Δϕ) produce results that rarely agree. Analytical solutions that simultaneously utilize Ar and Δϕ within a single solution have more recently been derived, decreasing uncertainty in flux estimates in some...
Authors
Dylan J. Irvine, Martin A. Briggs, Ian Cartwright, Courtney R. Scruggs, Laura K. Lautz
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