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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 42871

It's like night and day: Diel net-effects on Cercopagidae densities in the Laurentian Great Lakes It's like night and day: Diel net-effects on Cercopagidae densities in the Laurentian Great Lakes

In the Laurentian Great Lakes, zooplankters are often sampled using standard ≤153 μm mesh nets without regard to the time of day they are collected. We sampled Cercopagidae during 2013–2014 in northern Lake Huron during day, dusk, and night using two different nets (a 0.5 m wide 153 μm mesh “standard” net and a 0.75 m wide 285 μm mesh “Bythotrephes” net) to determine if there were any...
Authors
Patricia M. Dieter, David B. Bunnell, Jean V. Adams, Nicole M. Watson, Whitney Woelmer

Sparse targets in hydroacoustic surveys: Balancing quantity and quality of in situ target strength data Sparse targets in hydroacoustic surveys: Balancing quantity and quality of in situ target strength data

Hydroacoustic sampling of low-density fish in shallow water can lead to low sample sizes of naturally variable target strength (TS) estimates, resulting in both sparse and variable data. Increasing maximum beam compensation (BC) beyond conventional values (i.e., 3 dB beam width) can recover more targets during data analysis; however, data quality decreases near the acoustic beam edges...
Authors
Mark R. DuFour, Christine M. Mayer, Patrick Kocovsky, Song Qian, David M. Warner, Richard T. Kraus, Christopher Vandergoot

Disease protection and allelopathic interactions of seed-transmitted endophytic pseudomonads of invasive reed grass (Phragmites australis) Disease protection and allelopathic interactions of seed-transmitted endophytic pseudomonads of invasive reed grass (Phragmites australis)

Background and aims Non-native Phragmites australis (haplotype M) is an invasive grass that decreases biodiversity and produces dense stands. We hypothesized that seeds of Phragmites carry microbes that improve seedling growth, defend against pathogens and maximize capacity of seedlings to compete with other plants. Methods We isolated bacteria from seeds of Phragmites, then evaluated...
Authors
James F. White, Kathryn Kingsley, Kurt P. Kowalski, Ivelisse Irizarry, April Micci, Marcos Antonio Soares, Marshall S. Bergen

Can ozone be used to control the spread of freshwater Aquatic Invasive Species? Can ozone be used to control the spread of freshwater Aquatic Invasive Species?

The introduction of aquatic invasive species to non-native habitats can cause negative ecological effects and also billions of dollars in economic damage to governments and private industries. Once aquatic invasive species are introduced, eradication may be difficult without adversely affecting native species and habitats, urging resource managers to find preventative methods to protect...
Authors
Riley P. Buley, Caleb T. Hasler, John A. Tix, C. D. Suski, Terrance D. Hubert

Environmental factors affecting survival of immature Ixodes scapularis and implications for geographical distribution of lyme disease: The climate/behavior hypothesis Environmental factors affecting survival of immature Ixodes scapularis and implications for geographical distribution of lyme disease: The climate/behavior hypothesis

Recent reports suggest that host-seeking nymphs in southern populations of Ixodes scapularis remain below the leaf litter surface, while northern nymphs seek hosts on leaves and twigs above the litter surface. This behavioral difference potentially results in decreased tick contact with humans in the south, and fewer cases of Lyme disease. We studied whether north-south differences in...
Authors
Howard S. Ginsberg, Marisa Albert, Lixis Acevedo, Megan C. Dyer, Isis M. Arsnoe, Jean I. Tsao, Thomas N. Mather, Roger A. LeBrun

Life history plasticity does not confer resilience to environmental change in the mole salamander (Ambystoma talpoideum) Life history plasticity does not confer resilience to environmental change in the mole salamander (Ambystoma talpoideum)

Plasticity in life history strategies can be advantageous for species that occupy spatially or temporally variable environments. We examined how phenotypic plasticity influences responses of the mole salamander, Ambystoma talpoideum, to disturbance events at the St. Marks National Wildlife Refuge (SMNWR), FL, USA from 2009 to 2014. We observed periods of extensive drought early in the...
Authors
Courtney L. Davis, David A.W. Miller, Susan C. Walls, William J. Barichivich, Jeffrey W. Riley, Mary E. Brown

The USGS National Wildlife Health Center: Advancing wildlife and ecosystem health The USGS National Wildlife Health Center: Advancing wildlife and ecosystem health

In 1975, the Federal government responded to the need for establishing national expertise in wildlife health by creating the National Wildlife Health Center (NWHC), a facility within the Department of the Interior; the NWHC is the only national center dedicated to wildlife disease detection, control, and prevention. Its mission is to provide national leadership to safeguard wildlife and...
Authors
Gail Moede Rogall, Jonathan M. Sleeman

The Bayesian group lasso for confounded spatial data The Bayesian group lasso for confounded spatial data

Generalized linear mixed models for spatial processes are widely used in applied statistics. In many applications of the spatial generalized linear mixed model (SGLMM), the goal is to obtain inference about regression coefficients while achieving optimal predictive ability. When implementing the SGLMM, multicollinearity among covariates and the spatial random effects can make computation
Authors
Trevor J. Hefley, Mevin Hooten, Ephraim M. Hanks, Robin E. Russell, Daniel P. Walsh

Identifying western yellow-billed cuckoo breeding habitat with a dual modelling approach Identifying western yellow-billed cuckoo breeding habitat with a dual modelling approach

The western population of the yellow-billed cuckoo (Coccyzus americanus) was recently listed as threatened under the federal Endangered Species Act. Yellow-billed cuckoo conservation efforts require the identification of features and area requirements associated with high quality, riparian forest habitat at spatial scales that range from nest microhabitat to landscape, as well as lower...
Authors
Matthew J. Johnson, James R. Hatten, Jennifer A. Holmes, Patrick B. Shafroth

Isotopic structure of Lake Whitefish in Lake Huron: Evidence for regional and local populations based on resource use Isotopic structure of Lake Whitefish in Lake Huron: Evidence for regional and local populations based on resource use

Lake Whitefish Coregonus clupeaformis is the most commercially valuable species in Lake Huron. The fishery for this species has historically been managed based on 25 management units (17 in Canada, 8 in the USA). However, congruence between the contemporary population structure of Lake Whitefish and management units is poorly understood. We used stable isotopes of carbon (δ13C) and...
Authors
Rebecca L. Eberts, Bjorn Wissel, Gavin L. Simpson, Stephen S. Crawford, Wendylee Stott, Robert H. Hanner, Richard G. Manzon, Joanna Y. Wilson, Douglas R. Boreham, Christopher M. Somers

A comparison of honey bee-collected pollen from working agricultural lands using light microscopy and ITS metabarcoding A comparison of honey bee-collected pollen from working agricultural lands using light microscopy and ITS metabarcoding

Taxonomic identification of pollen has historically been accomplished via light microscopy but requires specialized knowledge and reference collections, particularly when identification to lower taxonomic levels is necessary. Recently, next-generation sequencing technology has been used as a cost-effective alternative for identifying bee-collected pollen; however, this novel approach has...
Authors
Matthew Smart, Robert S. Cornman, Deborah D. Iwanowicz, Margaret McDermott-Kubeczko, Jeff S Pettis, Marla S Spivak, Clint Otto

Editor’s note Editor’s note

Heavy metal contamination at shooting ranges is well documented (e.g., Heier et al. 2009; Islam et al. 2016). Primarily lead, but also copper, zinc, and antimony often occur at high concentrations in shooting range soils; cadmium, nickel, silver, and arsenic may also be present (Cao et al. 2003; Islam et al. 2016). These metals represent a potential threat to human health and wildlife...
Authors
Christopher J. Schmitt
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