Publications
This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.
Filter Total Items: 42701
Distribution, abundance, and breeding activities of the Least Bell's Vireo at Marine Corps Base Camp Pendleton, California—2020 annual report Distribution, abundance, and breeding activities of the Least Bell's Vireo at Marine Corps Base Camp Pendleton, California—2020 annual report
Executive Summary The purpose of this report is to provide the Marine Corps with an annual summary of abundance, breeding activity, demography, and habitat use of endangered Least Bell’s Vireos (Vireo bellii pusillus) at Marine Corps Base Camp Pendleton (MCBCP, or Base). Surveys for the Least Bell's Vireo were conducted at MCBCP, California, between April 1 and July 10, 2020. Core survey...
Authors
Suellen Lynn, Michelle Treadwell, Barbara E. Kus
Distribution, Abundance, and Breeding Activities of the Southwestern Willow Flycatcher at Marine Corps Base Camp Pendleton, California—2020 Annual Report Distribution, Abundance, and Breeding Activities of the Southwestern Willow Flycatcher at Marine Corps Base Camp Pendleton, California—2020 Annual Report
Executive Summary Surveys for the endangered Southwestern Willow Flycatcher (Empidonax traillii extimus) were done at Marine Corps Base Camp Pendleton (MCBCP or “Base”), California, between May 4 and July 31, 2020. All of MCBCP’s historically occupied riparian habitat (core survey area) was surveyed for flycatchers in 2020. Additionally, one-fifth of the unoccupied riparian habitat (non...
Authors
Scarlett L. Howell, Barbara E. Kus
Effects of elevated pCO2 on bioenergetics and disease susceptibility in Pacific herring Clupea pallasii Effects of elevated pCO2 on bioenergetics and disease susceptibility in Pacific herring Clupea pallasii
Ocean acidification can affect the immune responses of fish, but effects on pathogen susceptibility remain uncertain. Pacific herring Clupea pallasii were reared from hatch under 3 CO2 partial pressure ( pCO2) treatments (ambient, ∼650 µatm; intermediate, ∼1500 µatm; high, ∼3000 µatm) through metamorphosis (98 d) to evaluate the effects of ocean acidification on bioenergetics and...
Authors
Christopher Murray, Jacob L. Gregg, Ashley MacKenzie, Hiruni Jayasekara, Sophie Hall, Terrie Klinger, Paul Hershberger
Demographics of a previously undocumented diamondback terrapin (Malaclemys terrapin) population Demographics of a previously undocumented diamondback terrapin (Malaclemys terrapin) population
Coastal habitats are some of the most imperiled due to climate change and anthropogenic activities. As such, it is important to understand population dynamics of the species that may play a role in regulating coastal systems. Diamondback terrapins in Northwest Florida have been understudied, which has resulted in a gap in our knowledge for this region. To help fill this gap, we conducted...
Authors
Daniel J. Catizone, Travis M. Thomas, Christina Romagosa, Margaret Lamont
Distribution, abundance, and habitat characteristics of Coastal Cactus Wrens (Campylorhynchus brunneicapillus) in San Diego County, California—2023 Data Summary Distribution, abundance, and habitat characteristics of Coastal Cactus Wrens (Campylorhynchus brunneicapillus) in San Diego County, California—2023 Data Summary
Executive Summary We surveyed for coastal Cactus Wren (Campylorhynchus brunneicapillus) in 507 established plots in San Diego County in 2023, encompassing 4 genetic clusters (Otay, Lake Jennings, Sweetwater/Encanto, and San Pasqual). Two surveys were completed at each plot between March 1 and July 31. Cactus Wrens were detected in 181 plots (36 percent of plots). Cactus Wrens were...
Authors
Suellen Lynn, Barbara E. Kus
Nihoa and Laysan Island passerines population abundances, trends, and habitat utilization Nihoa and Laysan Island passerines population abundances, trends, and habitat utilization
Nihoa and Laysan Island, part of the Northwestern Hawaiian Islands, are host to three endangered passerine species—Nihoa finch (Telespiza ultima), Nihoa millerbird (Acrocephalus familiaris kingi), and Laysan finch (Telespiza cantans). Using point-transect distance sampling survey records from 2010 to 2022 for Nihoa and 2013 to 2019 for Laysan Island, we estimated the density and...
Authors
Trevor Bak, Richard J. Camp, Chris Farmer, Rachel A. Rounds, Sheldon M. Plentovich, John Vetter, Paul C. Banko
Spatial patterns as long transients in submersed-floating plant competition with biocontrol Spatial patterns as long transients in submersed-floating plant competition with biocontrol
A cellular automata model was developed and parameterized to test the effectiveness of application of biological control insects to water hyacinth (Pontederia crassipes), which is an invasive floating plant species in many parts of the world and outcompetes many submersed native aquatic species in southern Florida. In the model, P. crassipes was allowed to compete with Nuttall’s...
Authors
Linhao Xu, Don DeAngelis
Visualizing wading bird optimal foraging decisions with aggregation behaviors using individual-based modeling Visualizing wading bird optimal foraging decisions with aggregation behaviors using individual-based modeling
Foragers on patchy landscapes must efficiently balance time between searching for and consuming resources to meet their daily energetic requirements. Spatial aggregation foraging behaviors may improve foraging efficiency by sharing information on locations of resource hotspots. Wading birds are an example of patch foragers that form colonial aggregations during the breeding season to...
Authors
Simeon Yurek, Donald L. DeAngelis, Hyo Won Lee, Stephen Tennenbaum
Observed and potential range shifts of native and non-native species with climate change Observed and potential range shifts of native and non-native species with climate change
There is broad concern that the range shifts of global flora and fauna will not keep up with climate change, increasing the likelihood of population declines and extinctions. Many populations of nonnative species already have advantages over native species, including widespread human-aided dispersal and release from natural enemies. But do nonnative species also have an advantage with...
Authors
Bethany A. Bradley, Evelyn M. Beaury, Belinda Gallardo, Inés Ibáñez, Catherine S. Jarnevich, Toni Lyn Morelli, Helen Sofaer, Cascade J.B. Sorte, Montserrat Vilà
Evaluation of short-term mussel test for estimating toxicity Evaluation of short-term mussel test for estimating toxicity
Effect concentrations of ammonia, nickel, sodium chloride, and potassium chloride from short-term 7-day tests were compared to those from standard chronic 28-day toxicity tests with juvenile mussels (fatmucket, Lampsilis siliquoidea) to evaluate the sensitivities of the 7-day tests. The effect concentrations for nickel (59 µg Ni/L), chloride (316–519 mg Cl/L, a range from multiple tests)...
Authors
Ning Wang, James L. Kunz, Chris D. Ivey, Danielle M. Cleveland, Jeffery A. Steevens
Conservation genetics of the endangered California Freshwater Shrimp (Syncaris pacifica): Watershed and stream networks define gene pool boundaries Conservation genetics of the endangered California Freshwater Shrimp (Syncaris pacifica): Watershed and stream networks define gene pool boundaries
Understanding genetic structure and diversity among remnant populations of rare species can inform conservation and recovery actions. We used a population genetic framework to spatially delineate gene pools and estimate gene flow and effective population sizes for the endangered California Freshwater Shrimp Syncaris pacifica. Tissues of 101 individuals were collected from 11 sites in 5...
Authors
Abdul M. Ada, Amy G. Vandergast, Robert N. Fisher, Darren Fong, Andrew J. Bohonak
Artificial intelligence applied to big data reveals that lake invasions are predicted by human traffic and co-occurring invasions Artificial intelligence applied to big data reveals that lake invasions are predicted by human traffic and co-occurring invasions
Preventing the spread of aquatic invasive species is an important management action. Identifying the characteristics of lakes that are susceptible to invasion creates an opportunity for management groups to prioritize limited resources for high-risk areas. In this study, we leveraged big data from a popular fishing app and other publicly available sources of environmental and human-use...
Authors
Jessica L. Weir, Wesley Daniel, Kieran Hyder, Christian Skov, Paul A. Venturelli